LOCUS       NM_001145198            1211 bp    mRNA    linear   ROD 30-APR-2024
DEFINITION  Mus musculus RIKEN cDNA 1500009L16 gene (1500009L16Rik), mRNA.
ACCESSION   NM_001145198 XM_899407 XM_922288
VERSION     NM_001145198.1
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 1211)
  AUTHORS   Adams,D.J., Barlas,B., McIntyre,R.E., Salguero,I., van der
            Weyden,L., Barros,A., Vicente,J.R., Karimpour,N., Haider,A.,
            Ranzani,M., Turner,G., Thompson,N.A., Harle,V., Olvera-Leon,R.,
            Robles-Espinoza,C.D., Speak,A.O., Geisler,N., Weninger,W.J.,
            Geyer,S.H., Hewinson,J., Karp,N.A., Fu,B., Yang,F., Kozik,Z.,
            Choudhary,J., Yu,L., van Ruiten,M.S., Rowland,B.D., Lelliott,C.J.,
            Del Castillo Velasco-Herrera,M., Verstraten,R., Bruckner,L.,
            Henssen,A.G., Rooimans,M.A., de Lange,J., Mohun,T.J., Arends,M.J.,
            Kentistou,K.A., Coelho,P.A., Zhao,Y., Zecchini,H., Perry,J.R.B.,
            Jackson,S.P. and Balmus,G.
  CONSRTM   Sanger Mouse Genetics Project
  TITLE     Genetic determinants of micronucleus formation in vivo
  JOURNAL   Nature 627 (8002), 130-136 (2024)
   PUBMED   38355793
REFERENCE   2  (bases 1 to 1211)
  AUTHORS   Stryke,D., Kawamoto,M., Huang,C.C., Johns,S.J., King,L.A.,
            Harper,C.A., Meng,E.C., Lee,R.E., Yee,A., L'Italien,L.,
            Chuang,P.T., Young,S.G., Skarnes,W.C., Babbitt,P.C. and Ferrin,T.E.
  TITLE     BayGenomics: a resource of insertional mutations in mouse embryonic
            stem cells
  JOURNAL   Nucleic Acids Res 31 (1), 278-281 (2003)
   PUBMED   12520002
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            BC048550.1, CD776925.1 and CO044092.1.
            
            On or before Feb 18, 2009 this sequence version replaced
            XM_922288.2, XM_899407.2.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC048550.1, SRR1660817.450363.1
                                           [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN00849377, SAMN00849380
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on conservation, expression
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-723               BC048550.1         1-723
            724-1022            CD776925.1         189-487             c
            1023-1211           CO044092.1         1-189               c
FEATURES             Location/Qualifiers
     source          1..1211
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="10"
                     /map="10 41.3 cM"
     gene            1..1211
                     /gene="1500009L16Rik"
                     /gene_synonym="2700050C19Rik; OCC-1"
                     /note="RIKEN cDNA 1500009L16 gene"
                     /db_xref="GeneID:69784"
                     /db_xref="MGI:MGI:1917034"
     exon            1..170
                     /gene="1500009L16Rik"
                     /gene_synonym="2700050C19Rik; OCC-1"
                     /inference="alignment:Splign:2.1.0"
     CDS             125..316
                     /gene="1500009L16Rik"
                     /gene_synonym="2700050C19Rik; OCC-1"
                     /note="Putative overexpressed in colon carcinoma 1 protein
                     homolog"
                     /codon_start=1
                     /product="overexpressed in colon carcinoma 1 protein
                     homolog"
                     /protein_id="NP_001138670.1"
                     /db_xref="CCDS:CCDS48656.1"
                     /db_xref="GeneID:69784"
                     /db_xref="MGI:MGI:1917034"
                     /translation="MGCGNSTATSAAAGRGPTGAVKDTTEDSITEDDKRRNYGGVYVG
                     LPSEAVNMASSQTKTVQKN"
     exon            171..195
                     /gene="1500009L16Rik"
                     /gene_synonym="2700050C19Rik; OCC-1"
                     /inference="alignment:Splign:2.1.0"
     exon            196..231
                     /gene="1500009L16Rik"
                     /gene_synonym="2700050C19Rik; OCC-1"
                     /inference="alignment:Splign:2.1.0"
     exon            232..311
                     /gene="1500009L16Rik"
                     /gene_synonym="2700050C19Rik; OCC-1"
                     /inference="alignment:Splign:2.1.0"
     exon            312..349
                     /gene="1500009L16Rik"
                     /gene_synonym="2700050C19Rik; OCC-1"
                     /inference="alignment:Splign:2.1.0"
     exon            350..1194
                     /gene="1500009L16Rik"
                     /gene_synonym="2700050C19Rik; OCC-1"
                     /inference="alignment:Splign:2.1.0"
     regulatory      724..729
                     /regulatory_class="polyA_signal_sequence"
                     /gene="1500009L16Rik"
                     /gene_synonym="2700050C19Rik; OCC-1"
                     /note="hexamer: AATATA"
     polyA_site      725
                     /gene="1500009L16Rik"
                     /gene_synonym="2700050C19Rik; OCC-1"
                     /note="major polyA site"
     regulatory      1171..1176
                     /regulatory_class="polyA_signal_sequence"
                     /gene="1500009L16Rik"
                     /gene_synonym="2700050C19Rik; OCC-1"
                     /note="hexamer: ATTAAA"
     polyA_site      1194
                     /gene="1500009L16Rik"
                     /gene_synonym="2700050C19Rik; OCC-1"
ORIGIN      
        1 gggttcgtgg gggtccccgc gcggggcggg gctagggctg tccctagtcc cgcgcgccgc
       61 ctccttctgg gtctcctcca ctgggacctg aggtccagag cgcggcttcc ctgcgggtgg
      121 cgcgatgggt tgcgggaact ccacggccac cagcgcggcc gcgggccgag gtccaacagg
      181 agcagttaaa gacacaacag aagactcgat aacggaagac gacaagagga gaaactatgg
      241 aggagtgtat gttggcctgc cctctgaagc tgtcaacatg gcgtctagtc aaacaaagac
      301 tgtacagaag aattagagga agataacatg acggctggat actcaagagc ttgctcatga
      361 atttggaagg aacttggctt ccgggacact gaacacagat atcttcaaac aaattccgaa
      421 aggtcattcc tgctgtgcaa cctcgcccga atcctagctg tgtagtgaag gccatgggtc
      481 catactgatg ttgtggtcat agaagggact ttgtgccacc caccaatgag agaccataaa
      541 ggctgttgct acccggcctg ggccaccagg ctccacacca tggtgtttcc cctcctggcc
      601 atccagcaca ggtcgccaag cgcatgtctt ttcactgata atcttttgat agtttttata
      661 tgacacaatc cttattgtat ttataacatg gtcatagggc cacataaagg aattacctga
      721 agtaatatat tgcctcttgt cttcaatgtt tctatgtcat tattttttag ctgtaaagtt
      781 ggtaaatgga ttcttataac catctccctt tttttactag ttggtttaaa atttttattt
      841 acatgctggg agaattccct ttgttaagaa cattgcagca tttgaaaatg aactcgttaa
      901 atgtgcatgc tatacacata tggattaaag tcctcttttc ttcagtcaaa ggcttaaata
      961 attataagta gtctccagct acccacttgc ctgttctccc cttgtgtagc ctgagcatct
     1021 catcatatta actctgcact gtctcttagg acgtaactga ggacagttaa tgtttagtgg
     1081 ggtttctggg aaatgcttaa tttgctaaca atatgtgtat gcactcatga cagcagtata
     1141 aggatctcag tttgccaatg tatttcaaca attaaacatt tttatccctc tttaaaaaaa
     1201 aaaaaaaaaa a
//
