LOCUS       NM_025419               3361 bp    mRNA    linear   ROD 30-APR-2024
DEFINITION  Mus musculus RIKEN cDNA 1110059G10 gene (1110059G10Rik), mRNA.
ACCESSION   NM_025419
VERSION     NM_025419.4
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 3361)
  AUTHORS   Adams,D.J., Barlas,B., McIntyre,R.E., Salguero,I., van der
            Weyden,L., Barros,A., Vicente,J.R., Karimpour,N., Haider,A.,
            Ranzani,M., Turner,G., Thompson,N.A., Harle,V., Olvera-Leon,R.,
            Robles-Espinoza,C.D., Speak,A.O., Geisler,N., Weninger,W.J.,
            Geyer,S.H., Hewinson,J., Karp,N.A., Fu,B., Yang,F., Kozik,Z.,
            Choudhary,J., Yu,L., van Ruiten,M.S., Rowland,B.D., Lelliott,C.J.,
            Del Castillo Velasco-Herrera,M., Verstraten,R., Bruckner,L.,
            Henssen,A.G., Rooimans,M.A., de Lange,J., Mohun,T.J., Arends,M.J.,
            Kentistou,K.A., Coelho,P.A., Zhao,Y., Zecchini,H., Perry,J.R.B.,
            Jackson,S.P. and Balmus,G.
  CONSRTM   Sanger Mouse Genetics Project
  TITLE     Genetic determinants of micronucleus formation in vivo
  JOURNAL   Nature 627 (8002), 130-136 (2024)
   PUBMED   38355793
REFERENCE   2  (bases 1 to 3361)
  AUTHORS   Ingham,N.J., Pearson,S.A., Vancollie,V.E., Rook,V., Lewis,M.A.,
            Chen,J., Buniello,A., Martelletti,E., Preite,L., Lam,C.C.,
            Weiss,F.D., Powis,Z., Suwannarat,P., Lelliott,C.J., Dawson,S.J.,
            White,J.K. and Steel,K.P.
  TITLE     Mouse screen reveals multiple new genes underlying mouse and human
            hearing loss
  JOURNAL   PLoS Biol 17 (4), e3000194 (2019)
   PUBMED   30973865
  REMARK    Publication Status: Online-Only
REFERENCE   3  (bases 1 to 3361)
  AUTHORS   Ballif,B.A., Villen,J., Beausoleil,S.A., Schwartz,D. and Gygi,S.P.
  TITLE     Phosphoproteomic analysis of the developing mouse brain
  JOURNAL   Mol Cell Proteomics 3 (11), 1093-1101 (2004)
   PUBMED   15345747
REFERENCE   4  (bases 1 to 3361)
  AUTHORS   Stryke,D., Kawamoto,M., Huang,C.C., Johns,S.J., King,L.A.,
            Harper,C.A., Meng,E.C., Lee,R.E., Yee,A., L'Italien,L.,
            Chuang,P.T., Young,S.G., Skarnes,W.C., Babbitt,P.C. and Ferrin,T.E.
  TITLE     BayGenomics: a resource of insertional mutations in mouse embryonic
            stem cells
  JOURNAL   Nucleic Acids Res 31 (1), 278-281 (2003)
   PUBMED   12520002
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AK160617.1 and AK083316.1.
            
            On Sep 19, 2009 this sequence version replaced NM_025419.3.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK083316.1, AK160617.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN01164131, SAMN01164133
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-1918              AK160617.1         2-1919
            1919-3361           AK083316.1         1895-3337
FEATURES             Location/Qualifiers
     source          1..3361
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="9"
                     /map="9 73.3 cM"
     gene            1..3361
                     /gene="1110059G10Rik"
                     /note="RIKEN cDNA 1110059G10 gene"
                     /db_xref="GeneID:66202"
                     /db_xref="MGI:MGI:1913452"
     exon            1..196
                     /gene="1110059G10Rik"
                     /inference="alignment:Splign:2.1.0"
     CDS             89..556
                     /gene="1110059G10Rik"
                     /codon_start=1
                     /product="uncharacterized protein KIAA1143 homolog"
                     /protein_id="NP_079695.2"
                     /db_xref="CCDS:CCDS23650.1"
                     /db_xref="GeneID:66202"
                     /db_xref="MGI:MGI:1913452"
                     /translation="MSKRNQVSYVRPAEPAFLSRFKERVGYKEGPTVETKKIQPQLPD
                     EDGNHSDKEDEQPQVVVLKKGDLTAEEVMKIKAEIKAAKTDEEPPPADGRIVYRKPVK
                     RSSDEKCSGLTASSKKKKTNEDDVNKQSSVRKNSQKQIKNSSLLSFDSEDENE"
     exon            197..341
                     /gene="1110059G10Rik"
                     /inference="alignment:Splign:2.1.0"
     exon            342..3361
                     /gene="1110059G10Rik"
                     /inference="alignment:Splign:2.1.0"
     regulatory      884..889
                     /regulatory_class="polyA_signal_sequence"
                     /gene="1110059G10Rik"
                     /note="hexamer: ATTAAA"
     polyA_site      913
                     /gene="1110059G10Rik"
                     /note="major polyA site"
     regulatory      1900..1905
                     /regulatory_class="polyA_signal_sequence"
                     /gene="1110059G10Rik"
                     /note="hexamer: ATTAAA"
     polyA_site      1919
                     /gene="1110059G10Rik"
ORIGIN      
        1 acgtcagaag tccgcgcggg cgacagacac tttgtaccct gccaagtctg ccgagtgcta
       61 tttattgttg gtcagaacca gaactaccat gagcaagcgg aaccaagtgt cctatgtgcg
      121 gcccgcagag cccgccttcc tgtcccgctt caaagagaga gtcggctaca aggaggggcc
      181 caccgtagag accaagaaaa tccagcctca gctcccagat gaagatggca atcacagtga
      241 caaagaagat gaacagcctc aagtagtggt tttaaaaaag ggagacctaa cagctgaaga
      301 ggtcatgaaa attaaagcag aaataaaggc tgccaaaaca gatgaagaac cacctccagc
      361 tgatggaaga atagtttatc gaaaaccagt taagcgttcc tcagatgaaa agtgttcagg
      421 tttaacagca agctccaaaa agaagaaaac caatgaagat gatgtaaata agcaaagttc
      481 agttagaaag aactcacaaa aacaaataaa aaatagcagt ctcctttctt ttgacagtga
      541 agatgaaaat gagtaaatat gaatattgtg gacttggttt cctgttttta aaaatactgc
      601 ttttgctcca tcttcaagtg acactgtact acatgttcat tgcagaagaa ctcagaaata
      661 cagggagcga tttcataaag taaacctacc cattcctgcc cctttgtttg gaatgccaga
      721 cattcactac tgctaatgct ttttattgtc tccctcctat gggtatgtat atatgtatat
      781 tgcattttta aacaaaactg agattgttat atttcttctt tgtccttctt tcttagaatt
      841 acatttgtag aattttctga tgttgtttat ttcaaaatct aacattaaag gcttccagag
      901 gatttcataa atagatctgt cttagtcact gttctgttgc tgagaagaga tgacatgaca
      961 gctcttataa aagaaggcat ttaattaggg gcttgctcac agtttcagct tggtctactg
     1021 ccatcagggc aggaaacatg gcatcaagac tggcctgatg ctggagaagg atatacctca
     1081 gagctatatc ctgatccaca agcagggtgg agtggggtgt ggggactggg gaggagtggg
     1141 gccattggag ggaaaaaggg agagcctgac tgagcttctg aaacctcaaa gcacacttcc
     1201 tccagtaaag ccatatctcc tagtccttgt aatcctttca aacagttcta ctccctgagc
     1261 ctctgctgtg tctttctcat tagtaaaacc ctgcacttga tgaaggcatg gcctggctaa
     1321 aaataccttt ctaagccagg tgtagtaacc tgtaacccca gcacatggaa aacaaagaca
     1381 ggaggaagat caagacccac tgctctgtgg agtgagttct agaccagcca gggtgacaaa
     1441 gtgaggtgct gtctcaaaaa acaaagtaag tgcttatttg agcagaacat atactaacac
     1501 tttaataatt caagagtgta tatggcccct gtgcaatagc ggcaaattca cagggtcttc
     1561 cacattcaca caaggaaacc tacaaactgc agctcctgcc acttaaatgt attcagaaaa
     1621 agggagccag tggttgcttt ccaatttagc gttttgaaaa cacattttct gtggaaattt
     1681 taattcttag tcaagaaaaa cagaaaattt taataacagc ataattacct tataaaacaa
     1741 tctcttcatg taacaaacag ttccactgtt tttcaataat ttatttagaa cctgtgacaa
     1801 gatctccctg tgtatcactg actgtcctag aactcactat gtagacctgt gtaacctgga
     1861 acccagaggt ccatgtacct ctgcactctg agtgctagaa ttaaagacat atatcaccat
     1921 gcctggctaa aagaaatttg ttggtttttt ttttcaagac agggtttctc tgtgtagcca
     1981 tggctgtcat ggaactcacc ctgccttcct ctgactccaa gtgctaagat tagtaccact
     2041 gctgagctct aaagcaattt tttaaaagat gtgttttatt ttaaattata tgtgtgggaa
     2101 ggggactggg tgtagctcac ctcagaaaag ctgaagcgct atttttattt ttatgtctct
     2161 ctctgctttc ctcaagccca agtgatggag cttgaggtca ccaacatggg aacaggattg
     2221 gatcatcagg aaagtaagag ctagtgctgc cataccatga ctctgagact aaagaaccat
     2281 gtcctacacc attctgggat gccaggcagc ttcatctggt tcctccagtg gagcaaagag
     2341 gatgaggggt gtatgctgat gtcccagctc cagaaatggt cccacatgcc ttcccataaa
     2401 gagaaatgca ctgctggagg ggagcatgga ggtcattcct gcttcaaccc agccactttt
     2461 atcgtccctg tgactgtctt ttgagattct caaggatttt accaagctta gatgttcatt
     2521 tttcatatat tttctcactt gtcagagcca actcaaaaac cccaagcatt ttactcattt
     2581 acaatctttc ccaaatagcg ccagtttcca taggactgta gtggggttga agcagagtaa
     2641 tctataaaaa catctggcag gaagagacat tcgggaaaga tggcctagtg atgcaggtct
     2701 ttactttcag cactgctcaa gcaggtggat ctacttgagg ctagcccagt ttacatagtg
     2761 agtcctaggt tagccagtgc atcataagga gaccatgtca ttagagtatc tatggtagaa
     2821 tgtggcttaa tggtagagca tttcctccta tcaccagtgc tagatattcc taatagcact
     2881 aacaccccca ctaacccaaa tgttaatgtc agagctatcg tgatctcaag ctccaggtcc
     2941 aattctcagt gttcttcctt cagttgcatt tccaggcctc tggatggaaa ctgacaacac
     3001 acacttgttt ctgcaacgct ttgactctta atgctttttt tttcagagta atttggggtc
     3061 attcagacat gcattccaag gaaaaaggat gggtcagagg atccaattca cttttaggct
     3121 tccggacagt tttacaagca caaggcagtg gggctgtgtg tctgcatata gtaggctctt
     3181 agaaaacaat tatttgataa gtcaatgaaa tgcaaagaca ctgttcaaac tttcaaatgg
     3241 actgttttcc caaaaccatc acttaaggga acaaaatcag aagtggacaa aactggggct
     3301 atgctttagg gatagacctc ctgtgcaaac attgagcatt ggatcaattc ccaacaatat
     3361 t
//
