LOCUS       NM_001167996            2813 bp    mRNA    linear   ROD 12-JUN-2024
DEFINITION  Mus musculus RIKEN cDNA 1110032F04 gene (1110032F04Rik), mRNA.
ACCESSION   NM_001167996 XM_485253 XM_905342
VERSION     NM_001167996.2
KEYWORDS    RefSeq; RefSeq Select.
SOURCE      Mus musculus (house mouse)
  ORGANISM  Mus musculus
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
            Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE   1  (bases 1 to 2813)
  AUTHORS   Katayama,S., Tomaru,Y., Kasukawa,T., Waki,K., Nakanishi,M.,
            Nakamura,M., Nishida,H., Yap,C.C., Suzuki,M., Kawai,J., Suzuki,H.,
            Carninci,P., Hayashizaki,Y., Wells,C., Frith,M., Ravasi,T.,
            Pang,K.C., Hallinan,J., Mattick,J., Hume,D.A., Lipovich,L.,
            Batalov,S., Engstrom,P.G., Mizuno,Y., Faghihi,M.A., Sandelin,A.,
            Chalk,A.M., Mottagui-Tabar,S., Liang,Z., Lenhard,B. and
            Wahlestedt,C.
  CONSRTM   RIKEN Genome Exploration Research Group; Genome Science Group
            (Genome Network Project Core Group); FANTOM Consortium
  TITLE     Antisense transcription in the mammalian transcriptome
  JOURNAL   Science 309 (5740), 1564-1566 (2005)
   PUBMED   16141073
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC115062.13.
            
            On Jan 18, 2022 this sequence version replaced NM_001167996.1.
            
            ##Evidence-Data-START##
            Transcript is intronless :: SRR7974084.23884.1, SRR7652917.989091.1
                                        [ECO:0000345]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-2813              AC115062.13        37511-40323         c
FEATURES             Location/Qualifiers
     source          1..2813
                     /organism="Mus musculus"
                     /mol_type="mRNA"
                     /strain="C57BL/6"
                     /db_xref="taxon:10090"
                     /chromosome="3"
                     /map="3 32.06 cM"
     gene            1..2813
                     /gene="1110032F04Rik"
                     /note="RIKEN cDNA 1110032F04 gene"
                     /db_xref="GeneID:68725"
                     /db_xref="MGI:MGI:1915975"
     exon            1..2813
                     /gene="1110032F04Rik"
                     /inference="alignment:Splign:2.1.0"
     CDS             358..1101
                     /gene="1110032F04Rik"
                     /codon_start=1
                     /product="uncharacterized membrane protein C3orf80 homolog
                     precursor"
                     /protein_id="NP_001161468.1"
                     /db_xref="CCDS:CCDS50931.1"
                     /db_xref="GeneID:68725"
                     /db_xref="MGI:MGI:1915975"
                     /translation="MWGPGVTAEGLSVAPAPPPLLPLLLLLALALVAPSRGGGGCAEL
                     ACGERERCCDSANATAVRCCKLPLHAFLDNVGWFVRKLSGLLILLVLFAIGYFLQRII
                     CPSPRRYPRGQARPGQARPGPPGGAGPPGTAGPPDDDDDSPALLRDEVAAGSQDSLLD
                     SGGGRGRGSGGRLPPSCVSEHELHVVSPVFLQLPSYEEVKYLPTYEESMRLQQLSPAE
                     VVLPVSVLGRPRGGSAGDSDGGQVRFPLI"
     regulatory      2716..2721
                     /regulatory_class="polyA_signal_sequence"
                     /gene="1110032F04Rik"
                     /note="hexamer: AATAAA"
     polyA_site      2740
                     /gene="1110032F04Rik"
                     /note="major polyA site"
     regulatory      2789..2794
                     /regulatory_class="polyA_signal_sequence"
                     /gene="1110032F04Rik"
                     /note="hexamer: ATTAAA"
     polyA_site      2813
                     /gene="1110032F04Rik"
                     /note="major polyA site"
ORIGIN      
        1 aggtgccgga agaagagcgc ggcgggcaac ggccgagatg cccagagaga cccagcgcag
       61 gccggctctg ttcatctccg cggctccgca cgcttctccc gggaccctgg cgcccaggcg
      121 ctacggctcg aggtcacagg ctcccgaggc ggcgacagcg gtgagcagca gccgcctccc
      181 gcagcctcgg cgcgccccgg gctcctcctc ccgccccagc gtggccaagt gagcaccgct
      241 cgggccgcag gtagccgggg cgcgggaggc ggcgcgcgcg ggacccatcg cagcgccggg
      301 gccagacgga gctccgagcc tcgcggtccc ggacgccagc ggagatctgc gccggccatg
      361 tggggtcccg gggtcaccgc cgagggcctg tcggtggctc cagcgccacc gccgctgctg
      421 ccgctgctgc tgctgttggc gctggcgttg gtggcgccct cgcggggcgg cgggggctgc
      481 gcggagctgg cgtgcggtga gcgggagcgc tgctgcgact cggccaacgc cacggccgtg
      541 cgctgctgca agctgccgct ccacgccttt ctggacaacg tgggctggtt cgtccgcaag
      601 ctctctgggc tgctcatcct gctggtgctc ttcgccatcg gctacttcct gcagcgcatc
      661 atctgcccca gcccacgcag gtacccgcgt ggccaggcgc gacctggcca ggcacgaccc
      721 gggcctcccg ggggtgcggg accgccgggg acggcggggc cacccgacga cgacgacgac
      781 tcgcccgctc tgctgcgcga cgaggtggcc gcgggctcgc aggactcact gttggatagt
      841 ggcggtggtc ggggccgagg aagtggcgga cgcctgcctc cctcctgcgt ttcggagcac
      901 gagctgcacg tggtgtcacc ggtgtttctc cagctgccca gctacgagga ggtcaagtac
      961 ctgcccacct atgaggagtc catgcggctg cagcagctca gcccagcgga ggtcgtgctg
     1021 cccgtgtcgg tgctcggccg cccgcgaggc ggcagtgccg gggactccga cggcggccag
     1081 gtccgtttcc cgctcatctg agttcaggga gcctcatggg gatcgcccgg atcctacaag
     1141 gttgggggct gcgggtggca cgcaacagct ggtgtgttgg cggccgccac tgactgcctc
     1201 tgaccacacc tagcatcccc gtacaacctg tagccccgcg cctgggttgg ggtcagtccc
     1261 ctccctctcg cttcccgggg aatctgtggt tttctatgtt tctttgggct caaggctggg
     1321 cagctcggcg gggcaatggc ttaggactag cccccagctc ttcttggacg gtcgtccccg
     1381 ccctctgcca tgcctcccct tgtgttcact gtaagtgcct gcttctccaa tccaaaagaa
     1441 caggtaaacc gtttggtgtg tttagagacc agcggcttgc tttactgttg ttaaaaggga
     1501 aggagcatag gtccattcct tgctctcctg cttggaccgg tcacggtctc ccaggacata
     1561 atggtgagga gcctttggct ctggaccacg accagtgact gctgcatgca gtctgtagaa
     1621 gcagcgcttg actgtgatgc gatcccttga aaaggaccca gaaaaccctt tggtgtcttc
     1681 ctggctcaca gttttgttgg ggaaggggta ccatgatgga tggcttagtg gctgcatctg
     1741 ttcaagatgt ccagaccgta tttgtaatgt ggtaccagcg gactttgatt tttcagtatg
     1801 tagactgttt atctttgtcc tttattttta tattttgtca tgcattagac agttcaacaa
     1861 attgacaaga taatcagttt tgttttaggc cagttactgt caagaaatcg cccacgtgct
     1921 gtcactgttt aatacagtgt tggacatcat ttcattaagc ggaggtcagg gtcaagcagg
     1981 aaatgtgaca taaaaacatg aaggatatct tattttcact atttgagaat atattttatt
     2041 tttagtactg aagcataata cataactttt tataataact gtgtacatta tgtagcctgg
     2101 ctctgaactg tatcattcat catggaatca tgtaaaagga atatatatat atatatacca
     2161 caccatgtag caagatggct tgcctgtatt tccttctcta tttttcatct gagatacatt
     2221 ctgcaatgtg attctaaaca taaaaatgga ctagtaactt tcatttaagt ctgaaacttt
     2281 tcagtaatgt ccaaagatgg attcacccaa cctatgttta ttaaaattaa gtggtatcat
     2341 tttactagat ttaccattct gggacattcc ctttaaggaa agggtaataa gacacatttt
     2401 aatgcatcat gtataatgta catatggtaa tgtctgtgta cactatatac attgtatgcc
     2461 atatagctgt ggtggcttac ggctagcatg ggaggaaagg gtggcaagaa gtccagcttc
     2521 ctctggagaa gcgtgaagta taccagttgt caagaaagat tacccacatg ggtctatgat
     2581 tgaagaagct gggtgggccc aagaaatctc caattagctg gtttggattt tttaaaatga
     2641 tttgattact tttaactttt aaagggtgat tgaaaaagtc tgatgtcctg ggaacttttt
     2701 taatgtatgg attataataa aaagaatggt ttgctttaaa cttctcaaag ctaatgaccc
     2761 tgtcattaaa gaaaatcatc tgaagtgtat taaagcagaa aaacagtaaa cta
//
