LOCUS       NM_199341               3600 bp    mRNA    linear   PRI 04-APR-2024
DEFINITION  Homo sapiens zinc finger SWIM-type containing 9 (ZSWIM9), mRNA.
ACCESSION   NM_199341 XM_001713770 XM_001713771 XM_003960765 XM_351207
VERSION     NM_199341.4
KEYWORDS    RefSeq; MANE Select.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 3600)
  AUTHORS   Hassan,I.U., Rehman,H.M., Liu,Z., Zhou,L., Samma,M.K., Wang,C.,
            Rong,Z., Qi,X., Cai,D. and Zhao,H.
  TITLE     Genome-wide identification and spatiotemporal expression profiling
            of zinc finger SWIM domain-containing protein family genes
  JOURNAL   Zool Res 44 (3), 663-674 (2023)
   PUBMED   37161653
REFERENCE   2  (bases 1 to 3600)
  AUTHORS   Miyamoto-Sato,E., Fujimori,S., Ishizaka,M., Hirai,N., Masuoka,K.,
            Saito,R., Ozawa,Y., Hino,K., Washio,T., Tomita,M., Yamashita,T.,
            Oshikubo,T., Akasaka,H., Sugiyama,J., Matsumoto,Y. and Yanagawa,H.
  TITLE     A comprehensive resource of interacting protein regions for
            refining human transcription factor networks
  JOURNAL   PLoS One 5 (2), e9289 (2010)
   PUBMED   20195357
  REMARK    Publication Status: Online-Only
REFERENCE   3  (bases 1 to 3600)
  AUTHORS   Hosgood,H.D. 3rd, Zhang,L., Shen,M., Berndt,S.I., Vermeulen,R.,
            Li,G., Yin,S., Yeager,M., Yuenger,J., Rothman,N., Chanock,S.,
            Smith,M. and Lan,Q.
  TITLE     Association between genetic variants in VEGF, ERCC3 and
            occupational benzene haematotoxicity
  JOURNAL   Occup Environ Med 66 (12), 848-853 (2009)
   PUBMED   19773279
  REMARK    GeneRIF: Observational study of gene-disease association. (HuGE
            Navigator)
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC011466.6 and BC043386.1.
            
            On Nov 22, 2018 this sequence version replaced NM_199341.3.
            
            Sequence Note: This RefSeq record was created from transcript and
            genomic sequence data to make the sequence consistent with the
            reference genome assembly. The genomic coordinates used for the
            transcript record were based on transcript alignments.
            
            ##Evidence-Data-START##
            CDS exon combination :: ERR3218374.362778.1, DRR138524.102074.1
                                    [ECO:0000331]
            RNAseq introns       :: single sample supports all introns
                                    SAMEA1970526, SAMEA2142680 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            MANE Ensembl match     :: ENST00000614654.2/ ENSP00000480314.1
            RefSeq Select criteria :: based on conservation
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-12                AC011466.6         88270-88281
            13-683              BC043386.1         1-671
            684-684             AC011466.6         112294-112294
            685-1898            BC043386.1         673-1886
            1899-3209           AC011466.6         113509-114819
            3210-3600           BC043386.1         1887-2277
FEATURES             Location/Qualifiers
     source          1..3600
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /chromosome="19"
                     /map="19q13.33"
     gene            1..3600
                     /gene="ZSWIM9"
                     /gene_synonym="C19orf68"
                     /note="zinc finger SWIM-type containing 9"
                     /db_xref="GeneID:374920"
                     /db_xref="HGNC:HGNC:34495"
     exon            1..35
                     /gene="ZSWIM9"
                     /gene_synonym="C19orf68"
                     /inference="alignment:Splign:2.1.0"
     exon            36..319
                     /gene="ZSWIM9"
                     /gene_synonym="C19orf68"
                     /inference="alignment:Splign:2.1.0"
     CDS             45..2807
                     /gene="ZSWIM9"
                     /gene_synonym="C19orf68"
                     /note="uncharacterized protein C19orf68"
                     /codon_start=1
                     /product="uncharacterized protein ZSWIM9"
                     /protein_id="NP_955373.3"
                     /db_xref="CCDS:CCDS74411.1"
                     /db_xref="GeneID:374920"
                     /db_xref="HGNC:HGNC:34495"
                     /translation="MERPEPPPGTAAGQEEQELRERAFFSWAEFSRFFDAWCQQRLAL
                     FFVKSSMHLARCRWASAPPLYTLIDVLKYSYVRLVCKDVRAPSRPAVGPPQPGCPAFI
                     IVKLSPLRDRLVVTECQLTHSHPACPLEFAYYFRPGHLLANACLPVRTTNKISKQFVA
                     PADVRRLLSYCKGRDHGVLDALHVLEGLFRTDPEAKVKLVFVEDQAVVETVFFLTSRT
                     RALLRRFPRMLLVDRLPGLQGALDLLAVLCVDGSGRARQAACCVARPGTPSLLRFALA
                     SLLQSAPDVKGRVRCLTAGPEVAAQLPAVRQLLPCARVQICRAQGLETLFSKAQELGG
                     AGREDPGLWSRLCRLAGASSPAAYDEALAELHAHGPAAFVDYFERNWEPRRDMWVRFR
                     AFEAARDLDACALVRGHRRRLLRRLSPSRGVAQCLRDLVAMQWADAAGEAVPEGPDGG
                     GPWLEDEPGRGAQGENERVRGLETGDWGGAPKEGSIWRGAQMEKEWARALETRDWGGA
                     QFEGEKGRALQIRDWRGGRLENQKPRGLEGGVLRGSKLEKGHLRGPEIRDWRGPQLEG
                     EKDWGLEGYVWRGSQLEDQALRGLEGYTWRVAQLEDRRSTTDLRGTQFDYERVRSLEG
                     SPWRGAQLHDERAGGLRTAEWKGPQSEVEKGRGLEVRNLRGIPLEKSLELAPENGDQR
                     GPQWEDERRRGPEIAEERGARVGVKRRRGLEDIVLVQLGDTRVTGMENGDGGGARSVG
                     PKSRAGRGMEWGDAGGRCLGLGNGVVSGTPVGTVLEGSPEWAAARSEHLAAGDGLQEG
                     GEDGPREPKRLCRPPGEEEVDWEPLAKFRAACGPELADLVAEELAFARQHGTRGFHWT
                     GAGFALKDGTSDFFLDGALTRCSCSIHAARRLPCRHLFAARLLTGAALFHMDLLRDCW
                     GRAPEP"
     exon            320..632
                     /gene="ZSWIM9"
                     /gene_synonym="C19orf68"
                     /inference="alignment:Splign:2.1.0"
     exon            633..3600
                     /gene="ZSWIM9"
                     /gene_synonym="C19orf68"
                     /inference="alignment:Splign:2.1.0"
     regulatory      3376..3381
                     /regulatory_class="polyA_signal_sequence"
                     /gene="ZSWIM9"
                     /gene_synonym="C19orf68"
                     /note="hexamer: AAGAAA"
     polyA_site      3400
                     /gene="ZSWIM9"
                     /gene_synonym="C19orf68"
     regulatory      3580..3585
                     /regulatory_class="polyA_signal_sequence"
                     /gene="ZSWIM9"
                     /gene_synonym="C19orf68"
                     /note="hexamer: AATAAA"
     polyA_site      3600
                     /gene="ZSWIM9"
                     /gene_synonym="C19orf68"
                     /note="major polyA site"
ORIGIN      
        1 attgtgggag gtggacgccg ctccggggcg ggtaggcccc caggatggag cggccggagc
       61 ccccacccgg cacggctgcg gggcaggagg agcaggagct gcgggagcgg gccttcttct
      121 cgtgggccga gttcagccgc ttcttcgacg cgtggtgcca gcagcggctg gcgctcttct
      181 tcgtcaagag ctccatgcac ctggcgcgct gccgctgggc cagtgcgccc ccgctctaca
      241 cgctcatcga cgtgctcaag tacagctacg tgcggcttgt gtgcaaggac gtgcgtgcgc
      301 ccagccggcc cgccgtgggg cctccccagc ccggctgccc cgccttcatc atcgtcaagc
      361 tgagcccgct gcgggaccgc ctcgtggtga cggagtgcca gctgacccac tcacacccgg
      421 cctgcccgct ggagttcgcc tactacttcc gcccgggcca cctgctggcc aacgcctgcc
      481 tgccggtgcg caccaccaac aagatctcca agcagttcgt ggccccagcc gacgtgcgcc
      541 gcctgctgtc ctactgcaag ggccgcgacc acggcgtcct ggacgccctg cacgtgctcg
      601 agggcctctt ccgcaccgac cccgaggcca aggtgaagct ggtgttcgtg gaggaccagg
      661 ctgtggtgga gacggtgttc ttcctgacgt cgcgcaccag ggcgctgctg cggcgcttcc
      721 ctcgcatgct gctggtggac cggctgccgg ggctgcaggg cgcgctggat ctgctggccg
      781 tgctgtgcgt ggacggctcg ggccgtgcgc gccaggctgc ctgctgcgtg gcgcgcccgg
      841 gcacaccgag cctgctgcgc ttcgcgctcg cgtcgctgct gcagagcgcg ccagacgtca
      901 agggccgcgt gcgctgcctc accgccgggc ccgaggtggc ggcgcagttg cctgcagtgc
      961 gccagctgct gccctgcgcg cgcgtgcaga tctgccgcgc gcagggcctg gagacgctct
     1021 tcagcaaggc gcaggagctg ggcggcgccg gccgcgagga cccgggcctg tggtcgcgcc
     1081 tgtgccgcct ggctggcgcg tcgtcgcccg cagcctacga cgaggcgctg gccgagctcc
     1141 acgcccacgg cccagccgcc ttcgtggact acttcgagcg caactgggag ccccgccgcg
     1201 acatgtgggt ccgcttccgc gccttcgagg cggccagaga cctggacgcg tgtgccctgg
     1261 tgcgaggcca ccgccggcga ctgctgcgtc gtctcagccc ctcgcgtggc gtggcgcagt
     1321 gccttcgcga cctggtggcc atgcagtggg ccgacgcggc cggggaggcg gtgcccgagg
     1381 ggcccgatgg cggggggcct tggctggagg atgagccagg gaggggagcc cagggggaga
     1441 acgagagggt gaggggcctg gagacaggcg actggggagg ggctccgaaa gaaggaagta
     1501 tttggagggg agcccagatg gagaaggagt gggcaagggc actggaaacc agagactggg
     1561 gcggggctca gttcgaaggt gagaagggga gggcactgca gatcagagat tggagagggg
     1621 gtcggttgga gaatcagaag ccgaggggac tggaaggggg tgtcttgaga gggtcgaagt
     1681 tagagaaagg gcacctgaga gggccagaga ttagagactg gagggggccc cagttggagg
     1741 gtgagaaaga ttggggactg gaaggttatg tctggagggg gtcccagttg gaggaccagg
     1801 cgctaagagg attggaaggg tatacctgga gggtggccca gctggaagat cgcaggagta
     1861 ccaccgacct gagggggacc cagtttgact atgagagggt caggagtctt gaaggaagcc
     1921 cctggagggg ggcgcagctg cacgatgaaa gggcaggggg actgagaact gcagaatgga
     1981 aggggccaca gtcagaagta gagaagggga gggggctgga ggtcagaaac ttgaggggga
     2041 tccccttgga gaagtccctg gagttggccc ctgagaacgg agaccaaagg ggaccccagt
     2101 gggaagatga gaggaggaga gggccagaga ttgcagagga gaggggagcg agggtggggg
     2161 tcaaaagaag aaggggcctg gaggatatag ttctggtcca gctgggagac acgagggtca
     2221 caggcatgga gaatggagat ggagggggag cccggtccgt gggccccaag agccgagccg
     2281 gacgagggat ggagtgggga gacgcaggag ggcggtgtct agggctgggg aatggagtcg
     2341 tgtctggcac cccggtgggg actgtattgg aaggcagccc agaatgggca gcggcgagga
     2401 gtgaacacct ggctgcaggt gacggcctgc aggaaggagg cgaagatggc cccagggaac
     2461 caaagaggct ttgccgaccc ccgggagagg aggaggtgga ctgggaaccc ctggccaaat
     2521 tccgagcagc ctgcgggcca gagctggcag acctggtggc tgaggagttg gcctttgcta
     2581 ggcagcatgg gacccggggt ttccactgga ccggagctgg ctttgccctt aaggacggca
     2641 cctcggactt cttcctggat ggggccctga cacgctgcag ctgctcaatt cacgccgccc
     2701 gccgtctgcc ctgcagacac ctctttgcag cgcgcctcct cactggggct gccttattcc
     2761 acatggacct gctcagggat tgctggggga gagccccaga gccctgaccc ttcatgcctc
     2821 tgcccaccac cctccaccag gagggtcgga gggcattctt cgatcccaaa gataataggg
     2881 ctgaggccaa ggagaccgtt gcagtccccc tggccacctt ctgggtcatc cagggacctc
     2941 ctcatggcag tttgcctctc tgggtccaag ggcaagctgt aagtggtctc tgaggtcctg
     3001 gagccacagc ttgggaaggt gttgatgggc agggtggatt ctgagggctt ccctctggag
     3061 aggaagcatg tgatgagagg tgtagacagg gtcaggctgg gacagaagga aggaaagggg
     3121 cagagctggg gggaggggga ggaagcgatc atatggggag tgtctggcaa gagtagactg
     3181 gccagtctag ggagtgcagc ggggagaggg gaaagggaga aagtacagaa gacagatgaa
     3241 ggagaggagg taagcgagaa aaaatggaaa ggggagccgg aaatggagga gagaggacaa
     3301 gcaaagagac agaaatgaag acatgaggaa aagctggggg aagcaggaga ggaagggacg
     3361 ggatgtagga gggggaagaa aaatcggaga tgagacaaaa gaaatgtgtg ggagacgggt
     3421 agagacgaaa tgcaaggggc gtggttttgg tttttctcca agacctggag acatcgaccc
     3481 ccatcgcctt ctgaagagag agggagggcg ggcactgggg gtcaggagag tctccagcag
     3541 gggaggggaa ttgtttggac tattgttctt caggattgga ataaaacaat cttattttgg
//
