LOCUS       NM_001098626            2338 bp    mRNA    linear   PRI 04-APR-2024
DEFINITION  Homo sapiens zinc finger protein 98 (ZNF98), mRNA.
ACCESSION   NM_001098626 XM_047554
VERSION     NM_001098626.2
KEYWORDS    RefSeq; MANE Select.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 2338)
  AUTHORS   Shaffer,J.R., Feingold,E., Wang,X., Lee,M., Tcuenco,K., Weeks,D.E.,
            Weyant,R.J., Crout,R., McNeil,D.W. and Marazita,M.L.
  TITLE     GWAS of dental caries patterns in the permanent dentition
  JOURNAL   J Dent Res 92 (1), 38-44 (2013)
   PUBMED   23064961
REFERENCE   2  (bases 1 to 2338)
  AUTHORS   Wang,X., Shaffer,J.R., Zeng,Z., Begum,F., Vieira,A.R., Noel,J.,
            Anjomshoaa,I., Cuenco,K.T., Lee,M.K., Beck,J., Boerwinkle,E.,
            Cornelis,M.C., Hu,F.B., Crosslin,D.R., Laurie,C.C., Nelson,S.C.,
            Doheny,K.F., Pugh,E.W., Polk,D.E., Weyant,R.J., Crout,R.,
            McNeil,D.W., Weeks,D.E., Feingold,E. and Marazita,M.L.
  TITLE     Genome-wide association scan of dental caries in the permanent
            dentition
  JOURNAL   BMC Oral Health 12, 57 (2012)
   PUBMED   23259602
  REMARK    Publication Status: Online-Only
REFERENCE   3  (bases 1 to 2338)
  AUTHORS   Chasman,D.I., Giulianini,F., MacFadyen,J., Barratt,B.J., Nyberg,F.
            and Ridker,P.M.
  TITLE     Genetic determinants of statin-induced low-density lipoprotein
            cholesterol reduction: the Justification for the Use of Statins in
            Prevention: an Intervention Trial Evaluating Rosuvastatin (JUPITER)
            trial
  JOURNAL   Circ Cardiovasc Genet 5 (2), 257-264 (2012)
   PUBMED   22331829
  REMARK    Erratum:[Circ Cardiovasc Genet. 2012 Jun;5(3):e27]
REFERENCE   4  (bases 1 to 2338)
  AUTHORS   Grimwood,J., Gordon,L.A., Olsen,A., Terry,A., Schmutz,J.,
            Lamerdin,J., Hellsten,U., Goodstein,D., Couronne,O.,
            Tran-Gyamfi,M., Aerts,A., Altherr,M., Ashworth,L., Bajorek,E.,
            Black,S., Branscomb,E., Caenepeel,S., Carrano,A., Caoile,C.,
            Chan,Y.M., Christensen,M., Cleland,C.A., Copeland,A., Dalin,E.,
            Dehal,P., Denys,M., Detter,J.C., Escobar,J., Flowers,D.,
            Fotopulos,D., Garcia,C., Georgescu,A.M., Glavina,T., Gomez,M.,
            Gonzales,E., Groza,M., Hammon,N., Hawkins,T., Haydu,L., Ho,I.,
            Huang,W., Israni,S., Jett,J., Kadner,K., Kimball,H., Kobayashi,A.,
            Larionov,V., Leem,S.H., Lopez,F., Lou,Y., Lowry,S., Malfatti,S.,
            Martinez,D., McCready,P., Medina,C., Morgan,J., Nelson,K.,
            Nolan,M., Ovcharenko,I., Pitluck,S., Pollard,M., Popkie,A.P.,
            Predki,P., Quan,G., Ramirez,L., Rash,S., Retterer,J., Rodriguez,A.,
            Rogers,S., Salamov,A., Salazar,A., She,X., Smith,D., Slezak,T.,
            Solovyev,V., Thayer,N., Tice,H., Tsai,M., Ustaszewska,A., Vo,N.,
            Wagner,M., Wheeler,J., Wu,K., Xie,G., Yang,J., Dubchak,I.,
            Furey,T.S., DeJong,P., Dickson,M., Gordon,D., Eichler,E.E.,
            Pennacchio,L.A., Richardson,P., Stubbs,L., Rokhsar,D.S.,
            Myers,R.M., Rubin,E.M. and Lucas,S.M.
  TITLE     The DNA sequence and biology of human chromosome 19
  JOURNAL   Nature 428 (6982), 529-535 (2004)
   PUBMED   15057824
REFERENCE   5  (bases 1 to 2338)
  AUTHORS   Bellefroid,E.J., Marine,J.C., Ried,T., Lecocq,P.J., Riviere,M.,
            Amemiya,C., Poncelet,D.A., Coulie,P.G., de Jong,P., Szpirer,C. et
            al.
  TITLE     Clustered organization of homologous KRAB zinc-finger genes with
            enhanced expression in human T lymphoid cells
  JOURNAL   EMBO J 12 (4), 1363-1374 (1993)
   PUBMED   8467795
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC011516.3 and AC011494.2.
            
            On May 17, 2019 this sequence version replaced NM_001098626.1.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on transcript alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR7410570.652870.1, BX955247.1
                                           [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN03568912 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            MANE Ensembl match     :: ENST00000357774.9/ ENSP00000350418.4
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-152               AC011516.3         32422-32573         c
            153-279             AC011516.3         13613-13739         c
            280-375             AC011516.3         13016-13111         c
            376-1443            AC011516.3         2141-3208           c
            1444-2260           AC011494.2         1-817
            2261-2338           AC011494.2         818-895
FEATURES             Location/Qualifiers
     source          1..2338
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /chromosome="19"
                     /map="19p12"
     gene            1..2338
                     /gene="ZNF98"
                     /gene_synonym="F7175; ZNF739"
                     /note="zinc finger protein 98"
                     /db_xref="GeneID:148198"
                     /db_xref="HGNC:HGNC:13174"
                     /db_xref="MIM:603980"
     exon            1..152
                     /gene="ZNF98"
                     /gene_synonym="F7175; ZNF739"
                     /inference="alignment:Splign:2.1.0"
     CDS             123..1841
                     /gene="ZNF98"
                     /gene_synonym="F7175; ZNF739"
                     /note="zinc finger protein 739; zinc finger protein F7175"
                     /codon_start=1
                     /product="zinc finger protein 98"
                     /protein_id="NP_001092096.1"
                     /db_xref="CCDS:CCDS46031.1"
                     /db_xref="GeneID:148198"
                     /db_xref="HGNC:HGNC:13174"
                     /db_xref="MIM:603980"
                     /translation="MPGPLGSLEMGVLTFRDVALEFSLEEWQCLDTAQQNLYRNVMLE
                     NYRNLVFVGIAASKPDLITCLEQGKEPWNVKRHEMVTEPPVVYSYFAQDLWPKQGKKN
                     YFQKVILRTYKKCGRENLQLRKYCKSMDECKVHKECYNGLNQCLTTTQNKIFQYDKYV
                     KVFHKFSNSNRHKIGHTGKKSFKCKECEKSFCMLSHLAQHKRIHSGEKPYKCKECGKA
                     YNEASNLSTHKRIHTGKKPYKCEECGKAFNRLSHLTTHKIIHTGKKPYKCEECGKAFN
                     QSANLTTHKRIHTGEKPYKCEECGRAFSQSSTLTAHKIIHAGEKPYKCEECGKAFSQS
                     STLTTHKIIHTGEKFYKCEECGKAFSRLSHLTTHKRIHSGEKPYKCEECGKAFKQSST
                     LTTHKRIHAGEKFYKCEVCSKAFSRFSHLTTHKRIHTGEKPYKCEECGKAFNLSSQLT
                     THKIIHTGEKPYKCEECGKAFNQSSTLSKHKVIHTGEKPYKCEECGKAFNQSSHLTTH
                     KMIHTGEKPYKCEECGKAFNNSSILNRHKMIHTGEKLYKPESCNNACDNIAKISKYKR
                     NCAGEK"
     exon            153..279
                     /gene="ZNF98"
                     /gene_synonym="F7175; ZNF739"
                     /inference="alignment:Splign:2.1.0"
     exon            280..375
                     /gene="ZNF98"
                     /gene_synonym="F7175; ZNF739"
                     /inference="alignment:Splign:2.1.0"
     exon            376..2338
                     /gene="ZNF98"
                     /gene_synonym="F7175; ZNF739"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 gtctttgtct ctcgctgcag ccggagttcc tggtctcgtc ttcgcccttc tgtgtcctct
       61 gctcgtagag gcccagcctc tgtggccctg tgacctgcag gtattgggaa tccacagcta
      121 agatgccagg accccttgga agcctagaaa tgggagtgtt gacatttagg gatgtggcct
      181 tagaattctc tctggaggag tggcaatgcc tggacaccgc acagcagaat ttatatagga
      241 atgtgatgtt agagaactac agaaacctgg tctttgtggg tattgctgcc tctaagccag
      301 acctgatcac ctgtctggag caaggaaaag aaccttggaa tgtgaagaga catgagatgg
      361 taactgaacc cccagttgta tattcttatt ttgcccaaga cctttggcca aagcagggca
      421 aaaaaaatta tttccaaaaa gtgatactga gaacatataa aaaatgtgga cgtgaaaatt
      481 tacagttaag aaaatactgt aaaagcatgg atgagtgtaa ggtgcacaaa gaatgttaca
      541 atggacttaa ccagtgtttg acaactaccc agaacaaaat atttcaatat gacaaatatg
      601 tgaaagtctt tcataaattt tcaaattcaa acagacataa gataggacat actggaaaga
      661 aatctttcaa gtgtaaagaa tgtgaaaagt cattttgcat gctttcacac ttagctcaac
      721 ataaaagaat tcatagtgga gagaaaccct acaaatgtaa agaatgtggg aaagcctata
      781 atgaggcctc aaacctttct acacataaaa gaattcatac tggaaagaaa ccctacaaat
      841 gcgaagagtg tggaaaagcc tttaaccggc tctcacacct tactacacat aagataattc
      901 atactggaaa gaaaccctac aaatgtgagg agtgtggcaa agcttttaac caatctgcaa
      961 accttactac acataagaga attcatactg gagagaaacc ctacaaatgt gaagaatgtg
     1021 gcagagcttt tagccagtcc tcaaccctta ctgcacataa gataattcat gctggagaga
     1081 aaccttacaa atgtgaagaa tgtggcaaag cttttagcca gtcctcaacc cttactacac
     1141 ataagataat tcatactgga gagaaattct acaaatgtga agaatgtggt aaggccttta
     1201 gccggttatc ccaccttact acacataaga gaattcattc tggagagaaa ccctacaagt
     1261 gtgaagaatg tggcaaagct tttaaacaat cctcaaccct tactacacat aagagaattc
     1321 atgctggaga gaaattctac aaatgtgaag tatgtagcaa agcctttagc cggttctcac
     1381 accttactac acataagaga attcatactg gagagaagcc ctacaaatgt gaagaatgtg
     1441 gcaaagcttt taacctatca tcacaactta ctacacataa gataattcat actggagaga
     1501 aaccctacaa atgtgaagaa tgtggcaaag cttttaacca gtcctcaact ctttctaaac
     1561 ataaggtaat tcatactgga gagaagccct acaaatgtga agaatgtggc aaagctttta
     1621 accagtcctc acaccttact acacataaga tgattcatac tggagagaaa ccctacaagt
     1681 gtgaagaatg cggcaaagcc tttaacaact cctctattct taacagacat aagatgattc
     1741 atactggaga gaaactctac aaacctgaaa gttgtaacaa tgcttgtgac aacattgcaa
     1801 agatttccaa atataaaaga aattgtgctg gtgagaaata atagaaatat gaatgtgaca
     1861 aagcctttaa atggttatca cactggattg taggtaaggt aattcattct ggagaaaact
     1921 tctacaagtg tgaacagtgt ggcaaaactt acacaatgct caaaccttat tgcacaggaa
     1981 agcctttata cttgatgaga acaaatgtac aaatataaag aaagtaaaaa agtgattaat
     2041 atctgcacac atcttattca gcatcagaga atttatactt aatagcatta aaggtgcaat
     2101 tactgtcaaa agagttcaga aaatataagc atttaaagtg ctgaagagga tttattttga
     2161 agacaaacat tacaaatata aacgaagttg tggtaacttt acttgtaaca cagatcttgt
     2221 tgtattcatt ctgtattaga gcaaaccctg aggcaattgc tcaaactttg ttcaacatca
     2281 gagaatttat atcaaagaaa aaccctgtaa atgtaataaa tttagaaaaa aacattta
//
