LOCUS       NM_001102657            4076 bp    mRNA    linear   PRI 06-APR-2024
DEFINITION  Homo sapiens zinc finger protein 836 (ZNF836), mRNA.
ACCESSION   NM_001102657 XM_091886 XM_937268
VERSION     NM_001102657.3
KEYWORDS    RefSeq; MANE Select.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 4076)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
REFERENCE   2  (bases 1 to 4076)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc Natl Acad Sci U S A 99 (26), 16899-16903 (2002)
   PUBMED   12477932
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC010320.10 and AC011468.8.
            
            On Jun 2, 2019 this sequence version replaced NM_001102657.2.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR1803615.30554.1,
                                           SRR1803614.67346.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA2155751, SAMN03267753
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            MANE Ensembl match     :: ENST00000682614.1/ ENSP00000507838.1
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-286               AC010320.10        14763-15048         c
            287-420             AC010320.10        13075-13208         c
            421-515             AC010320.10        11485-11579         c
            516-642             AC011468.8         176154-176280       c
            643-4076            AC011468.8         169796-173229       c
FEATURES             Location/Qualifiers
     source          1..4076
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /chromosome="19"
                     /map="19q13.41"
     gene            1..4076
                     /gene="ZNF836"
                     /note="zinc finger protein 836"
                     /db_xref="GeneID:162962"
                     /db_xref="HGNC:HGNC:34333"
     exon            1..286
                     /gene="ZNF836"
                     /inference="alignment:Splign:2.1.0"
     exon            287..420
                     /gene="ZNF836"
                     /inference="alignment:Splign:2.1.0"
     exon            421..515
                     /gene="ZNF836"
                     /inference="alignment:Splign:2.1.0"
     CDS             501..3311
                     /gene="ZNF836"
                     /codon_start=1
                     /product="zinc finger protein 836"
                     /protein_id="NP_001096127.1"
                     /db_xref="CCDS:CCDS46162.1"
                     /db_xref="GeneID:162962"
                     /db_xref="HGNC:HGNC:34333"
                     /translation="MALTQGPLTFRDVAIEFSQEEWKSLDPVQKALYWDVMLENYRNL
                     VFLGILPKCMTKELPPIGNSNTGEKCQTVTLERHECYDVENFYLREIQKNLQDLEFQW
                     KDGEINYKEVPMTYKNNLNGKRGQHSQEDVENKCIENQLTLSFQSRLTELQKFQTEGK
                     IYECNQSEKTVNNSSLVSPLQRILPSVQTNISKKYENEFLQLSLPTQLEKTHIREKPY
                     MCKGCGKAFRVSSSLINHQMVHTTEKPYKCNECGKAFHRGSLLTIHQIVHTRGKPYQC
                     GVCGKIFRQNSDLVNHRRSHTGEKPYKCNECGKSFSQSYNLAIHQRIHTGEKPYKCNE
                     CGKTFKQGSCLTTHQIIHTGEKPYQCDICGKVFRQNSNLVNHQRIHTGEKPYKCNICG
                     KSFSQSSNLATHQTVHSGNKPYKCDECGKTFKRSSSLTTHQIIHTGEKPYTCDVCDKV
                     FSQRSQLARHQRSHTGEKPYKCNECGKVFSQTSHLVGHRRIHTGEKPYKCDKCGKAFK
                     QGSLLTRHKIIHTREKRYQCGECGKVFSENSCLVRHLRIHTGEQPYKCNVCGKVFNYS
                     GNLSIHKRIHTGEKPFQCNECGTVFRNYSCLARHLRIHTGQKPYKCNVCGKVFNDSGN
                     LSNHKRIHTGEKPFQCNECGKVFSYYSCLARHRKIHTGEKPYKCNDCGKAYTQRSSLT
                     KHLIIHTGEKPYNCNEFGGAFIQSSKLARYHRNPTGEKPHKCSHCGRTFSHITGLTYH
                     QRRHTGEMPYKCIECGQVFNSTSNLARHRRIHTGEKPYKCNECGKVFRHQSTLARHRS
                     IHTGEKPYVCNECGKAFRVRSILVNHQKMHTGDKPYKCNECGKAFIERSKLVYHQRNH
                     TGEKPYKCIECGKAFGRFSCLNKHQMIHSGEKPYKCNECGKSFISRSGLTKHQTKHTA
                     ESLKTKFNVEKPLDVLLTSGFK"
     exon            516..642
                     /gene="ZNF836"
                     /inference="alignment:Splign:2.1.0"
     exon            643..4076
                     /gene="ZNF836"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 ctttctgccc tttcccttgc gggtcgcacc ccgcccaggc ccctctcccg ccccaggtct
       61 ctcagtcttt tttctcaggg cgtgtagctt cctgcacacc cggaagcaga tcgcgcgggg
      121 aaaagatcac agcgctgcgc gtcagtttcc gtctacctgg actaaacatt tgcttcgccc
      181 cgtctgcctg aatcgaacgt gcacttggca gtcttccctt gtccataccc gtttcctggg
      241 gatcgctacg gaccttaaaa taccagcaac agccccttcg ccccaaggtc ttgctctgtc
      301 agactagagt acagtgccat gatctccgct cactgcagcc tcaacctcct gggctcaagc
      361 agtctttctg cctcagagtg ctgggattac agacgggagc caccacgcca ggcctacgag
      421 atttgacttg taaagaatta attatattga ctgagagaga agcccagaag aggaagaaga
      481 ggaaagaaaa ggagtcaggg atggctctta cacagggacc tttgacattc agggatgtag
      541 ccatagaatt ctctcaggag gagtggaaat ccctggaccc tgtgcagaaa gctttgtact
      601 gggatgtgat gttggagaac tacaggaacc tggtcttcct gggtatcctt cctaaatgta
      661 tgaccaagga attaccacca atagggaaca gtaatacagg agaaaaatgc caaacagtga
      721 cgctggaaag acatgaatgt tatgatgttg aaaattttta cttaagggaa atccagaaaa
      781 atctacagga ccttgagttt caatggaaag atggtgaaat aaattataaa gaagtgccaa
      841 tgacctataa aaacaatctt aatggtaaaa gaggtcaaca tagtcaagag gatgtagaaa
      901 acaaatgtat tgaaaatcag cttacattaa gctttcagtc acgtctgact gaactgcaga
      961 aatttcaaac tgaagggaaa atttatgagt gtaaccaatc tgagaagaca gttaataaca
     1021 gttccctagt ttcaccactt caaagaattc ttcctagtgt ccaaaccaac atttctaaaa
     1081 aatatgagaa tgagtttttg cagctgtcat tacccaccca acttgagaaa acacacatta
     1141 gggaaaaacc ttatatgtgt aaagggtgtg gcaaagcctt tagagtgtct tcaagtctta
     1201 ttaaccatca gatggtacat actacagaga aaccttacaa atgcaatgaa tgtggcaaag
     1261 cctttcatcg gggctcacta ctaactatac atcagatagt ccatacaagg gggaagccat
     1321 atcaatgtgg tgtatgtggc aagatcttca gacaaaattc agatcttgta aatcaccgga
     1381 gaagtcacac tggagagaaa ccgtacaaat gtaatgaatg tggcaagtcc tttagtcaaa
     1441 gttataacct tgcaatacat cagagaattc acactggaga gaaaccttac aaatgtaatg
     1501 agtgtgggaa aaccttcaaa caaggctcat gcctcactac acatcagata atccatacag
     1561 gagagaaacc atatcaatgt gatatatgtg gcaaggtctt caggcagaat tctaatcttg
     1621 taaatcacca gagaatccac actggagaga aaccatacaa atgcaacata tgtggaaagt
     1681 cctttagtca aagttccaac ctggcaactc atcagacagt tcatagtgga aacaaacctt
     1741 acaaatgtga tgagtgtggc aaaaccttta aacggagctc cagcctcact acacatcaga
     1801 taatccatac aggagagaaa ccatatacat gtgatgtatg cgacaaggtc ttcagtcaac
     1861 gttcacaact tgcaaggcac cagagaagtc atactggaga gaaaccttac aaatgcaatg
     1921 aatgtggcaa ggtcttcagt cagacttcac atcttgtggg gcatcggaga attcatactg
     1981 gagagaaacc ttacaaatgt gataaatgtg gtaaagcctt taaacagggc tcattactca
     2041 ctcgacataa gataattcat accagagaga aacgttacca atgcggtgaa tgtggaaagg
     2101 tctttagtga aaattcatgc cttgtaagac atttaagaat tcatactggg gagcaacctt
     2161 acaaatgtaa tgtgtgtggc aaggtcttca attacagtgg aaacctttca attcataaga
     2221 gaatacatac gggagagaaa cctttccaat gtaatgaatg tggcacagtc ttcaggaact
     2281 actcatgcct agcacgtcat ctaagaattc atactgggca gaaaccttac aaatgtaatg
     2341 tgtgtggcaa ggtcttcaat gacagtggaa acctttcaaa tcataagaga attcatactg
     2401 gagagaagcc gtttcaatgt aacgaatgcg gcaaggtttt cagttactac tcatgcctag
     2461 cacgtcatcg gaaaattcat accggagaga aaccttacaa atgtaatgat tgtggcaaag
     2521 cctatactca gcgttcaagc ctcactaaac atctgataat tcatactgga gagaaacctt
     2581 acaattgtaa tgagtttgga ggggcattta tccaaagttc aaaacttgca agatatcaca
     2641 gaaatcctac tggggagaaa ccacacaaat gtagccattg tggtagaact tttagtcata
     2701 taacaggcct gacgtaccat cagagaaggc atactggaga gatgccatac aaatgtattg
     2761 aatgtggcca ggtctttaat tccacttcga accttgcaag gcatcggaga attcacactg
     2821 gagagaaacc ttacaaatgt aatgaatgtg gcaaggtctt tcgtcatcaa tcaacactag
     2881 cacgtcatcg gagtattcat actggagaga aaccttacgt gtgtaatgag tgtggcaaag
     2941 cctttagagt gcgttcaatt ctggttaatc atcagaaaat gcatactggg gacaaacctt
     3001 acaaatgtaa tgaatgtggt aaagctttta ttgaaaggtc aaagctggtg taccatcaaa
     3061 gaaatcacac tggagagaag ccatacaaat gtattgaatg tggcaaggcc tttgggcggt
     3121 tttcttgcct caacaaacac caaatgattc attctggaga aaaaccttat aaatgtaatg
     3181 agtgtggcaa atctttcatt agtcgctcag gcctcactaa acatcagaca aaacatactg
     3241 cagagagtct taaaacaaaa ttcaatgtgg aaaagccttt agatgttctc ctaacttctg
     3301 ggttcaaata attcatactt attgatatag cttgtatatt tgtcacttcc gtctgaaatc
     3361 tcatgtggaa ttttaatccc ctttattgga ggtggggcct ggtgggagat gattggatca
     3421 caggggtgga tttctcaaga atggtttagc accacccgct ttttgctctt cttgggatag
     3481 tgagttctgg tgagatcttg tttttttgtt tgttttgctt ttttgagacg gagtctctct
     3541 ctgtcgccag gctggaatgc agtggcgtga tctaggctca ctgcaacctc tgcctcccag
     3601 gttcaagtga ttctcctgcc tcagtctccc tgagtagctg ggactacagg tgcacaccac
     3661 catgcctggc taatttttgt atttttagta gacatggagt ttcaccatgt tggccaggat
     3721 ggtctcaatt tcttgaccta gtgatctgcc tgcctcggcc tcccaaagtg ctgggattat
     3781 aggtgtgagc cactgcgcct ggctgagatc ttgttggtta aaagtgtatg gcacgttagg
     3841 catggtgggt catgcctgta atcccagcat ttagggaggt tggagcaggc agatcacttg
     3901 tggccaggtg ttcaaaacca ggctggtcaa cgtggtgaac agttgtctct actaaaatat
     3961 aaacattagc caggcatggt gatgcatgcc tgtaatccca gctactcagg aggctgaagc
     4021 atgaggatca cttgaaccca ggagacagag gttgcagtga gccaagatcg tgccag
//
