LOCUS       NM_001005850            3448 bp    mRNA    linear   PRI 04-APR-2024
DEFINITION  Homo sapiens zinc finger protein 835 (ZNF835), mRNA.
ACCESSION   NM_001005850 XM_032059
VERSION     NM_001005850.3
KEYWORDS    RefSeq; MANE Select.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 3448)
  AUTHORS   Luck,K., Kim,D.K., Lambourne,L., Spirohn,K., Begg,B.E., Bian,W.,
            Brignall,R., Cafarelli,T., Campos-Laborie,F.J., Charloteaux,B.,
            Choi,D., Cote,A.G., Daley,M., Deimling,S., Desbuleux,A., Dricot,A.,
            Gebbia,M., Hardy,M.F., Kishore,N., Knapp,J.J., Kovacs,I.A.,
            Lemmens,I., Mee,M.W., Mellor,J.C., Pollis,C., Pons,C.,
            Richardson,A.D., Schlabach,S., Teeking,B., Yadav,A., Babor,M.,
            Balcha,D., Basha,O., Bowman-Colin,C., Chin,S.F., Choi,S.G.,
            Colabella,C., Coppin,G., D'Amata,C., De Ridder,D., De Rouck,S.,
            Duran-Frigola,M., Ennajdaoui,H., Goebels,F., Goehring,L., Gopal,A.,
            Haddad,G., Hatchi,E., Helmy,M., Jacob,Y., Kassa,Y., Landini,S.,
            Li,R., van Lieshout,N., MacWilliams,A., Markey,D., Paulson,J.N.,
            Rangarajan,S., Rasla,J., Rayhan,A., Rolland,T., San-Miguel,A.,
            Shen,Y., Sheykhkarimli,D., Sheynkman,G.M., Simonovsky,E., Tasan,M.,
            Tejeda,A., Tropepe,V., Twizere,J.C., Wang,Y., Weatheritt,R.J.,
            Weile,J., Xia,Y., Yang,X., Yeger-Lotem,E., Zhong,Q., Aloy,P.,
            Bader,G.D., De Las Rivas,J., Gaudet,S., Hao,T., Rak,J.,
            Tavernier,J., Hill,D.E., Vidal,M., Roth,F.P. and Calderwood,M.A.
  TITLE     A reference map of the human binary protein interactome
  JOURNAL   Nature 580 (7803), 402-408 (2020)
   PUBMED   32296183
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC007228.1, AK299565.1, DC382896.1, AK023017.1 and DB536138.1.
            
            On Nov 23, 2018 this sequence version replaced NM_001005850.2.
            
            Sequence Note: This RefSeq record was created from transcript and
            genomic sequence data to make the sequence consistent with the
            reference genome assembly. The genomic coordinates used for the
            transcript record were based on transcript alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR1803615.27005.1,
                                           SRR1803617.44911.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA2159764, SAMN03267751
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            MANE Ensembl match     :: ENST00000537055.4/ ENSP00000444747.1
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-2                 AC007228.1         124629-124630       c
            3-42                AK299565.1         1-40
            43-165              DC382896.1         40-162
            166-313             AK299565.1         164-311
            314-553             DC382896.1         312-551
            554-597             AK299565.1         552-595
            598-598             AC007228.1         117703-117703       c
            599-695             AK299565.1         597-693
            696-696             AC007228.1         117605-117605       c
            697-1311            AK299565.1         695-1309
            1312-1312           AC007228.1         116989-116989       c
            1313-2161           AK299565.1         1311-2159
            2162-2265           AK023017.1         1772-1875
            2266-2498           AC007228.1         115803-116035       c
            2499-2776           DB536138.1         180-457
            2777-3448           AC007228.1         114853-115524       c
FEATURES             Location/Qualifiers
     source          1..3448
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /chromosome="19"
                     /map="19q13.43"
     gene            1..3448
                     /gene="ZNF835"
                     /gene_synonym="BC37295_3"
                     /note="zinc finger protein 835"
                     /db_xref="GeneID:90485"
                     /db_xref="HGNC:HGNC:34332"
     exon            1..182
                     /gene="ZNF835"
                     /gene_synonym="BC37295_3"
                     /inference="alignment:Splign:2.1.0"
     exon            183..3448
                     /gene="ZNF835"
                     /gene_synonym="BC37295_3"
                     /inference="alignment:Splign:2.1.0"
     CDS             230..1843
                     /gene="ZNF835"
                     /gene_synonym="BC37295_3"
                     /codon_start=1
                     /product="zinc finger protein 835"
                     /protein_id="NP_001005850.2"
                     /db_xref="CCDS:CCDS56105.1"
                     /db_xref="GeneID:90485"
                     /db_xref="HGNC:HGNC:34332"
                     /translation="MEGLLSVALQGAELEGNWKHEGQVEDLQENQESCPEPEAVACKG
                     DPAGDSMQERDEFSRIPRTISSPAATQASVPDDSSSRRCSAPGESPKERHPDSRQRER
                     GGGPKKPWKCGDCGKAFSYCSAFILHQRIHTGEKPFACPECGKAFSQSVHLTLHQRTH
                     TGEKPYACHECGKAFSQGSYLASHWRTHTGEKPHRCADCGKAFTRVTHLTQHRRVHTG
                     ERPYACAQCAKAFRNRSSLIEHQRIHTGEKPYECSACAKAFRFSSALIRHQRIHTEEK
                     PYRCGQCAKAFAQIAHLTQHRRVHTGEKPYTCQDCGALFSQSASLAEHRRIHTGEKPY
                     ACGQCAKAFTQVSHLTQHQRTHTGERPYPCHDCGKRFSNRSHLLQHRLVHTGERPYRC
                     LQCGAAFSHVSSLIEHQKIHTGERPYKCGECGKAFSQGSSLALHQRTHTGERPYTCPE
                     CGKAFSNRSYLIQHHIVHTGEKPYECSGCGKAFSFSSALIRHQRTHADSSGRLCPAPT
                     PDSTPGLSQGGETCQQGCPGRNPRGPAED"
     regulatory      2754..2759
                     /regulatory_class="polyA_signal_sequence"
                     /gene="ZNF835"
                     /gene_synonym="BC37295_3"
                     /note="hexamer: AATAAA"
     polyA_site      2780
                     /gene="ZNF835"
                     /gene_synonym="BC37295_3"
                     /note="major polyA site"
     regulatory      3423..3428
                     /regulatory_class="polyA_signal_sequence"
                     /gene="ZNF835"
                     /gene_synonym="BC37295_3"
                     /note="hexamer: ATTAAA"
     polyA_site      3448
                     /gene="ZNF835"
                     /gene_synonym="BC37295_3"
                     /note="major polyA site"
ORIGIN      
        1 ctggtgcgcg ggctcctccg cagcagcaga agtcttgacc ttagctcgtc taaggaagga
       61 ggcaccaggg tctgcgttgg cccaggagga cccgagactg agtagaagcg gagccgactg
      121 caccaggcta ggagggggcc ggccagcgcg ttcgaaggtg ataccgggag gcgagagcaa
      181 cgacccagag aaaagatgtg agatcaagac agcagcccag ggatcgagga tggagggact
      241 cttgagcgtc gccctccagg gcgcagagtt ggaaggaaac tggaaacacg agggccaggt
      301 tgaggacctg caggaaaacc aggaaagctg tccagagcca gaggccgtgg cctgcaaggg
      361 agaccctgct ggggacagca tgcaggaacg cgatgaattc agccgaatcc caagaaccat
      421 atcgagccct gctgctaccc aagccagtgt ccccgacgac agcagttccc ggaggtgcag
      481 cgcgcctggg gagagcccga aggagaggca tcctgacagc cgccagcggg agagaggtgg
      541 aggccccaag aagccgtgga aatgcgggga ctgcgggaag gccttcagct actgttcagc
      601 gttcatctta caccagagaa tccacaccgg ggagaagcca tttgcgtgcc ccgagtgcgg
      661 caaggccttc agccagagcg tgcacctgac cctgcaccag cgcacgcaca cgggcgagaa
      721 gccctacgcc tgccacgagt gcggcaaggc cttcagccag ggctcgtacc tggcgtccca
      781 ctggcgcacg cacacgggcg agaagccgca ccgctgcgcc gactgcggca aggccttcac
      841 gcgcgtcacg cacctgaccc agcaccggcg cgtgcacacg ggcgagcggc cctacgcgtg
      901 cgcccagtgc gccaaggcgt tccgcaaccg ctcgtccctg atagagcacc agcgcatcca
      961 caccggtgag aagccctacg agtgctccgc gtgcgccaag gccttccgct tctcctcagc
     1021 gctcatccgc caccagcgca tccacacgga ggagaagccc taccgctgcg gccagtgcgc
     1081 caaggccttc gcgcagatcg cgcacctgac ccagcaccgg cgcgtgcaca cgggcgagaa
     1141 gccctacacg tgccaggact gcggcgcgct cttcagccag agcgcctctc tggccgagca
     1201 ccggcgcatc cacacaggcg agaagcccta cgcgtgcggc cagtgcgcca aggccttcac
     1261 ccaggtgtcg cacctgacgc agcaccagcg cacgcacacc ggagagcggc cttacccctg
     1321 ccacgactgc ggcaagcgct tcagcaaccg ctcccacctc ctccagcacc gcctcgtgca
     1381 caccggtgag cggccctaca ggtgcctgca atgcggggcc gccttcagcc acgtgtcctc
     1441 gcttatagag caccagaaga tccacaccgg agagcggccc tacaagtgcg gcgagtgcgg
     1501 caaagctttc agccagggct cctcgctcgc cctgcaccag cgcacgcaca cgggcgagcg
     1561 gccctacacc tgccccgagt gcggcaaggc cttcagcaac cgctcctacc tgatccagca
     1621 ccacatcgtg cacaccgggg agaagcccta cgagtgcagc ggctgcggga aggccttcag
     1681 cttctcctcc gcgctcatcc gacaccagag gacgcatgca gacagttcgg gacgcctttg
     1741 cccagctccc acgcctgact caacacctgg gctctcacag ggaggagaaa cctgtcaaca
     1801 ggggtgccct ggcagaaacc cgcgtggacc agcagaagat taagagctga gggcctcctt
     1861 tccaacctca caatgctatg ggggagatac tgtgttatcc ccgacgcttc ctgtgaggaa
     1921 accgaggctc agagaagctt gttaacttgc ctgagggcac acagtgggga agacacaggg
     1981 ctaagactgt acctcacatc tgccagactc ccctgcggtc ttcctggtgc aaaattataa
     2041 atggggcacg ggcaagtaga cctgcagaaa cacctatggc tggcctttaa tttctttctt
     2101 tttttctttg agacagtgtc tctctctgtc acccaggcta gagtgcagtg gagcgatctc
     2161 ggctcactga aacttctgcc tcccgggtac aagtgattct cctgcctcaa cctcccgagt
     2221 agttaaaatt acaggagtct ggctaatttt tttttttttt tttttctgag acggagtctt
     2281 gctctgtcgc ccaggctgga gtgcagtgat gcaatctcgg ctcactgcaa cctccgcctc
     2341 ccgggttcaa gtgattcccc tacctcagcc tcccgagtag ctgggactac aggcgcccgg
     2401 ccaccacacc cggactagtt tttttgtatt ttagtagagg cggggtttca ccatgttggc
     2461 taggatggtc tcgatctcct gacttcgtta tccacccgcc tcggcctccc aaagtgctgg
     2521 gattacaggc atgagccacc gcgcccagcc taatttttgt atttttagta gaggcagggt
     2581 ttcaccatgt tggccaggct gtctcgaact cctaacatca ggcgatctgc ctgccttggc
     2641 atcccaaagt gctgggacta caggcctgag ctacggtgcc tggccagctg gccttttcat
     2701 tgttgatttt attgagtaag cccttgctca gtaaatttaa ttgaattaaa gtgaataaaa
     2761 ggtttggttt ctttggccaa gttggcatat ttactaaagg agcagagtct gaagaagaaa
     2821 tctggattca ctaagataga aatagtgctt agagaaaatg agcaggagaa atctagagct
     2881 gaaagttatt ctagaagaag ggagtgcttc tcctctacaa aagattttta gagtgggcct
     2941 agtctttttt tcagtatgag gaaacaccta cccatctcca ccatttttcc ccctaactca
     3001 aagacctgac tttaatgctt gtatcagtca gctcttgctg tgtaacaaac catccagccc
     3061 tcatttatcc atttactatt tctcatgcat ctggaggtca gctgctggtt ctgttggtct
     3121 ggaccaggct tggtctggac ctggaccagg agggctcagc tgggccaatt tgatcttctt
     3181 ctcctgactc acatctcacc tgggtgtgtt ctcagggagg tggcaggagt ctgagaggga
     3241 gtggacacac aggcatgctt tcaagtctct gatattgtca catttgcatc tagtcccaca
     3301 ggccaaagca agcctcctag ccaagcctag gatcagcaca ggaagagcct tcctaagcat
     3361 gtggtcccag ggaagggtga aaagtaggag ttatgaacgt aatccaccta ctacaatgtt
     3421 gaattaaagt tataatctca taacttca
//
