LOCUS       NM_007136               2948 bp    mRNA    linear   PRI 07-APR-2024
DEFINITION  Homo sapiens zinc finger protein 80 (ZNF80), mRNA.
ACCESSION   NM_007136
VERSION     NM_007136.4
KEYWORDS    RefSeq; MANE Select.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 2948)
  AUTHORS   Luck,K., Kim,D.K., Lambourne,L., Spirohn,K., Begg,B.E., Bian,W.,
            Brignall,R., Cafarelli,T., Campos-Laborie,F.J., Charloteaux,B.,
            Choi,D., Cote,A.G., Daley,M., Deimling,S., Desbuleux,A., Dricot,A.,
            Gebbia,M., Hardy,M.F., Kishore,N., Knapp,J.J., Kovacs,I.A.,
            Lemmens,I., Mee,M.W., Mellor,J.C., Pollis,C., Pons,C.,
            Richardson,A.D., Schlabach,S., Teeking,B., Yadav,A., Babor,M.,
            Balcha,D., Basha,O., Bowman-Colin,C., Chin,S.F., Choi,S.G.,
            Colabella,C., Coppin,G., D'Amata,C., De Ridder,D., De Rouck,S.,
            Duran-Frigola,M., Ennajdaoui,H., Goebels,F., Goehring,L., Gopal,A.,
            Haddad,G., Hatchi,E., Helmy,M., Jacob,Y., Kassa,Y., Landini,S.,
            Li,R., van Lieshout,N., MacWilliams,A., Markey,D., Paulson,J.N.,
            Rangarajan,S., Rasla,J., Rayhan,A., Rolland,T., San-Miguel,A.,
            Shen,Y., Sheykhkarimli,D., Sheynkman,G.M., Simonovsky,E., Tasan,M.,
            Tejeda,A., Tropepe,V., Twizere,J.C., Wang,Y., Weatheritt,R.J.,
            Weile,J., Xia,Y., Yang,X., Yeger-Lotem,E., Zhong,Q., Aloy,P.,
            Bader,G.D., De Las Rivas,J., Gaudet,S., Hao,T., Rak,J.,
            Tavernier,J., Hill,D.E., Vidal,M., Roth,F.P. and Calderwood,M.A.
  TITLE     A reference map of the human binary protein interactome
  JOURNAL   Nature 580 (7803), 402-408 (2020)
   PUBMED   32296183
REFERENCE   2  (bases 1 to 2948)
  AUTHORS   Di Cristofano,A., Strazzullo,M., Longo,L. and La Mantia,G.
  TITLE     Characterization and genomic mapping of the ZNF80 locus: expression
            of this zinc-finger gene is driven by a solitary LTR of ERV9
            endogenous retroviral family
  JOURNAL   Nucleic Acids Res 23 (15), 2823-2830 (1995)
   PUBMED   7659503
REFERENCE   3  (bases 1 to 2948)
  AUTHORS   Huebner,K., Druck,T., LaForgia,S., Lasota,J., Croce,C.M.,
            Lanfrancone,L., Donti,E., Pengue,G., La Mantia,G., Pelicci,P.G. et
            al.
  TITLE     Chromosomal localization of four human zinc finger cDNAs
  JOURNAL   Hum Genet 91 (3), 217-222 (1993)
   PUBMED   8478004
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC093010.7.
            
            On Nov 21, 2019 this sequence version replaced NM_007136.3.
            
            ##Evidence-Data-START##
            Transcript is intronless :: BC129925.1 [ECO:0000345]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            MANE Ensembl match     :: ENST00000482457.4/ ENSP00000417192.3
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-2948              AC093010.7         61746-64693         c
FEATURES             Location/Qualifiers
     source          1..2948
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /chromosome="3"
                     /map="3q13.31"
     gene            1..2948
                     /gene="ZNF80"
                     /gene_synonym="pT17"
                     /note="zinc finger protein 80"
                     /db_xref="GeneID:7634"
                     /db_xref="HGNC:HGNC:13155"
                     /db_xref="MIM:194553"
     exon            1..2948
                     /gene="ZNF80"
                     /gene_synonym="pT17"
                     /inference="alignment:Splign:2.1.0"
     CDS             505..1326
                     /gene="ZNF80"
                     /gene_synonym="pT17"
                     /note="ZNFPT17"
                     /codon_start=1
                     /product="zinc finger protein 80"
                     /protein_id="NP_009067.2"
                     /db_xref="CCDS:CCDS2979.1"
                     /db_xref="GeneID:7634"
                     /db_xref="HGNC:HGNC:13155"
                     /db_xref="MIM:194553"
                     /translation="MSPKRDGLGTGDGLHSQVLQEQVSTGDNLHECDSQGPSKDTLVR
                     EGKTYKCKECGSVFNKNSLLVRHQQIHTGVKPYECQECGKAFPEKVDFVRPMRIHTGE
                     KPCKCVECGKVFNRRSHLLCYRQIHTGEKPYECSECGKTFSYHSVFIQHRVTHTGEKL
                     FGCKECGKTFYYNSSLTRHMKIHTGEKPCKCSECGKTFTYRSVFFRHSMTHTAGKPYE
                     CKECGKGFYYSYSLTRHTRSHTGEKPYECLEHRKDFGYHSAFAQQSKIHSGGKNL"
     regulatory      2877..2882
                     /regulatory_class="polyA_signal_sequence"
                     /gene="ZNF80"
                     /gene_synonym="pT17"
                     /note="hexamer: AATAAA"
     polyA_site      2903
                     /gene="ZNF80"
                     /gene_synonym="pT17"
     regulatory      2923..2928
                     /regulatory_class="polyA_signal_sequence"
                     /gene="ZNF80"
                     /gene_synonym="pT17"
                     /note="hexamer: AATAAA"
     polyA_site      2948
                     /gene="ZNF80"
                     /gene_synonym="pT17"
                     /note="major polyA site"
ORIGIN      
        1 gccggagcca gcagtggcaa cccgctgggg tccctttcca cactgtggaa gctttgttct
       61 ttcgctcttt gcaataaatc ttgctacttc tcactctttg ggtccacact gcttttacca
      121 gctgtaacac tcaccgcaaa cgtctgcagc ttcactcctg aagccagcga gaccacgagc
      181 ccaccgggag gaacgaacaa ctccagacgc gccgccttaa gccttaagag ctgtaacact
      241 caccacgaag gtctgcagct tcactcctga gccagcgaga ccacgaaccc gccagaagga
      301 agaaactccg aacacatccg aacatcagaa ggaacaaact ctagacgcgc caccttaaga
      361 gctgtaacac tcaccacaag ggtccgcggc ttcattcttg aagtcagtga gaccaagaac
      421 ccaccaattc cggacacagt tggaaatgca gaagggcact tgagtttggc tgcagtctcc
      481 cacacggaga ccttctggag gaagatgagc cctaaacgcg atgggttggg gacaggtgat
      541 ggtctgcact cacaggtttt acaggagcag gtctccacag gagacaatct ccatgaatgt
      601 gactcccagg gaccaagtaa agacactttg gttcgtgagg ggaagaccta caaatgcaag
      661 gaatgtggga gcgtgtttaa caaaaacagc ctccttgttc gacatcagca gattcacact
      721 ggggtgaagc cttatgaatg ccaggagtgt ggaaaagcct ttcctgaaaa ggtcgacttc
      781 gttcgaccca tgaggattca cacaggggag aagccctgta agtgcgtgga gtgcgggaag
      841 gtcttcaacc gcaggtcgca cctcctgtgc taccgccaga ttcacactgg agagaagccc
      901 tatgagtgca gcgagtgtgg aaagaccttc agctatcact ctgtcttcat ccagcatcgt
      961 gtgacccaca ctggagaaaa actctttggg tgcaaagaat gtggaaaaac cttttactac
     1021 aactcttcct taacccggca catgaagatt cacactggag agaagccctg caagtgcagt
     1081 gagtgcggga agaccttcac ctaccgctct gttttcttcc gacatagtat gacccacact
     1141 gcaggaaagc cctacgagtg caaagaatgt gggaaaggtt tttactacag ctattccctc
     1201 actcgacata caaggagtca cactggagag aaaccttatg agtgccttga acatagaaag
     1261 gactttggct accactctgc ttttgcccaa cagagtaaga tccactctgg aggaaaaaac
     1321 ctttgagtgc aaatgatgtg ggaatttgtg ggttttcttt tttttttttt ctttgataca
     1381 tagagagcca cactgaggag aagcactctg aattcagtgg cagtaggaaa gctgtgacct
     1441 gcagctcatc ctcacttggc attgaagaat tccttccaga gataaactct atgagatatg
     1501 tgggaaggcc ttttgcaagt gggcccacat cagtcaacgt cagagaactt aaactgcgaa
     1561 aagacatttt gacaaaaact agtgaagaaa atcttttggc cacaggaaat atcttcctca
     1621 gcatctgaga atttttccag gagggagacc tgttggttat tgtgcactta aaagaaccac
     1681 ccacacctct ctccatagtt tatatcacta agccacttca ggattttttt tttttaagta
     1741 agaagggaac tgtaaaagag aaaaaaagaa attcatgcat agcttctgtc agacttctct
     1801 gaaagccatg cctatcaaaa tttgaattca gttcttcatt ttgcagatgg ctgaaaggta
     1861 caaaggcctt gcctcgttat ttgtccttta tatgtattca ctcctgtcta caggagaatt
     1921 gtcctctgta aagattaact ctgtaaagat ttattgaatg cattctttgt tctaaaacat
     1981 tgtactcctg aggaatgtaa gtctttgtga gaaatatgaa cgcttaagta atggaatatg
     2041 tgaaacttgt aagaacgtag aatataaaaa tactgccata taaaatcctt tcatatctga
     2101 ggaggtaagt aaccacattg aatgggcata ttttgctaca tcatttaaga ctacttaagg
     2161 ctttaattta acaaaaaaca attcttcatg tggttttgaa cacccagtgc tcaatatact
     2221 tgtttgtttt gatttatttt ctcagggacg agagaatgat ggtgaagctg tgttgctttc
     2281 ccaggtgagc cttgattatt tcctctgtgc tttctcagct tctttggcct tctgtaagag
     2341 gggcttctcc aagagcatgt cactagtttt ctagaagtta aacaagagct aagacaaaca
     2401 aaacaaaaca cagcttatct aatctaatga gaaactcaga aaaaaatgtt ttgatgaata
     2461 caatgtatta aaatataaaa catgtagatc ctttgacatg ttaattcaat tctagaaatc
     2521 ctcagaaatg tttttatatt atgcagagat gtgcgtgcaa agaataatcg ctgcagtttt
     2581 gtttttatgt gtgaaacgtt gagaacaatc taaatgttta tcagttggaa gtaagttatg
     2641 gtacatctgt tctatgaaat actgtgaaac aataaggtat ctctgtatgt actgatatca
     2701 aaacatctct aagatacagt atttagtaaa agagaaagtt tcaggaaata aaactacatc
     2761 tagaagtata agcataaaac tgttaatagt ggttttctgc aggaaatggg atggaccagg
     2821 gttatatgca atgttcagtt tttactttta tacttaagta ttgtttatgt ttgaaaaata
     2881 aaaagcattt attgtttttg caataaatgt ttaaaatatt tcaataaaga tagcatgtta
     2941 gaataaaa
//
