LOCUS       NM_206894               3040 bp    mRNA    linear   PRI 05-APR-2024
DEFINITION  Homo sapiens zinc finger protein 790 (ZNF790), transcript variant
            1, mRNA.
ACCESSION   NM_206894 XM_371163
VERSION     NM_206894.4
KEYWORDS    RefSeq; MANE Select.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 3040)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
REFERENCE   2  (bases 1 to 3040)
  AUTHORS   Lamesch,P., Li,N., Milstein,S., Fan,C., Hao,T., Szabo,G., Hu,Z.,
            Venkatesan,K., Bethel,G., Martin,P., Rogers,J., Lawlor,S.,
            McLaren,S., Dricot,A., Borick,H., Cusick,M.E., Vandenhaute,J.,
            Dunham,I., Hill,D.E. and Vidal,M.
  TITLE     hORFeome v3.1: a resource of human open reading frames representing
            over 10,000 human genes
  JOURNAL   Genomics 89 (3), 307-315 (2007)
   PUBMED   17207965
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC020928.7, AK297474.1 and BM473790.1.
            
            On Nov 22, 2018 this sequence version replaced NM_206894.3.
            
            Transcript Variant: This variant (1) represents a distinct first
            exon.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK297474.1, SRR11853561.14830.1
                                           [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMEA1965299,
                                           SAMEA1966682 [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            MANE Ensembl match     :: ENST00000356725.9/ ENSP00000349161.3
            RefSeq Select criteria :: based on conservation, expression
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-3                 AC020928.7         97675-97677         c
            4-504               AK297474.1         10-510
            505-901             BM473790.1         342-738
            902-2146            AK297474.1         908-2152
            2147-3040           AC020928.7         76718-77611         c
FEATURES             Location/Qualifiers
     source          1..3040
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /chromosome="19"
                     /map="19q13.12"
     gene            1..3040
                     /gene="ZNF790"
                     /note="zinc finger protein 790"
                     /db_xref="GeneID:388536"
                     /db_xref="HGNC:HGNC:33114"
     exon            1..51
                     /gene="ZNF790"
                     /inference="alignment:Splign:2.1.0"
     exon            52..133
                     /gene="ZNF790"
                     /inference="alignment:Splign:2.1.0"
     CDS             125..2035
                     /gene="ZNF790"
                     /codon_start=1
                     /product="zinc finger protein 790"
                     /protein_id="NP_996777.2"
                     /db_xref="CCDS:CCDS12496.1"
                     /db_xref="GeneID:388536"
                     /db_xref="HGNC:HGNC:33114"
                     /translation="MAHLMMFRDVAVDFSQEEWECLDLEQRDLYRDVMLENYSNMVSL
                     GFCIYQPEAFSLLEKGKEPWKILRDETRGPCPDMQSRCQTKKLLPKNGIFEREIAQLE
                     IMRICKNHSLDCLCFRGDWEGNTQFQTLQDNQEECFKQVIRTCEKRPTFNQHTVFNLH
                     QRLNTGDKLNEFKELGKAFISGSDHTQHQLIHTSEKFCGDKECGNTFLPDSEVIQYQT
                     VHTVKKTYECKECGKSFSLRSSLTGHKRIHTGEKPFKCKDCGKAFRFHSQLSVHKRIH
                     TGEKSYECKECGKAFSCGSDLTRHQRIHTGEKPYECNECRKAFSQRSHLIKHQRIHTG
                     EKPYECKECGKAFTRGSHLTQHQRIHTGEKSHECKECGKAFIRGSNLAQHQNVHVGRK
                     PYKCEKCGKAYIWSSHLARHQRIHTGRKPYECKQCGKTFTWASYLAQHEKIHNERKSY
                     ECKECGKTFLHGSEFNRHQKIHTGERNYECKECGKTFFRGSELNRHQKIHTGKRPYEC
                     EECGKAFLWGSQLTRHQRMHTGEEPYVCKECGKSFIWGSQLTRHKKIHTDAEPYGCKK
                     SSHIFSHHSYFTEQKIHNSANLCEWTDYGNTFSHESNFAQHQNIYTFEKSYEFKDFEK
                     AFSSSSHFISLL"
     exon            134..257
                     /gene="ZNF790"
                     /inference="alignment:Splign:2.1.0"
     exon            258..353
                     /gene="ZNF790"
                     /inference="alignment:Splign:2.1.0"
     exon            354..3040
                     /gene="ZNF790"
                     /inference="alignment:Splign:2.1.0"
     regulatory      3021..3026
                     /regulatory_class="polyA_signal_sequence"
                     /gene="ZNF790"
                     /note="hexamer: AGTAAA"
     polyA_site      3040
                     /gene="ZNF790"
                     /note="major polyA site"
ORIGIN      
        1 gttaatagaa agatcgcgga accttccacc atcaagggac cgcagggccg gctctgcttt
       61 cccagcacgc tgcctcacca agaaagaatc cagagaagga ctggtggact tggaatgtta
      121 agtcatggcc catttgatga tgttcaggga tgtggctgta gatttctctc aggaggagtg
      181 ggagtgcctg gacctggaac agagggattt atatagagat gtgatgttgg agaactacag
      241 caacatggtc tcactgggtt tttgcattta tcagccagaa gcgttctctt tattggagaa
      301 agggaaagag ccctggaaga ttttgaggga tgagacaaga ggaccttgcc cagacatgca
      361 gtcgaggtgt cagaccaaga agttattacc aaaaaatggc atttttgaga gagaaatagc
      421 ccaattggaa ataatgagaa tttgtaaaaa ccacagcctt gactgtttat gttttagagg
      481 tgactgggaa ggcaacactc agtttcaaac acttcaagat aatcaagagg aatgcttcaa
      541 gcaggtgata cgcacctgtg aaaaaaggcc cacttttaac cagcatacag tgtttaatct
      601 acaccagaga cttaatacag gagacaaact gaatgaattt aaagaactgg ggaaagcctt
      661 tatttctggt tcagatcata ctcaacatca gttaattcac acaagtgaga aattctgtgg
      721 agataaagaa tgtgggaata cctttcttcc tgattcagaa gttattcaat atcagacagt
      781 tcacactgtt aagaaaacat atgaatgtaa agaatgtggg aagtctttta gtttacgttc
      841 gagtcttact ggtcataaga gaattcatac cggtgagaaa ccttttaaat gtaaggattg
      901 tgggaaagcc tttagatttc attcacaact tagtgtccat aagcgaattc atactggtga
      961 gaaatcttat gaatgtaagg aatgtgggaa ggcctttagt tgtggctcag atcttactcg
     1021 acatcagaga attcatactg gtgaaaaacc ctatgaatgt aatgaatgta gaaaggcctt
     1081 tagtcagcga tcacatctta ttaaacatca gagaattcac actggtgaaa aaccttatga
     1141 atgtaaggag tgtgggaaag cttttactcg tggatcacac ctaactcagc atcagagaat
     1201 tcatactggt gagaaatctc atgagtgtaa ggaatgtgga aaagccttta ttcgtggttc
     1261 aaatcttgct caacatcaga atgttcatgt tggtaggaaa ccttataaat gtgagaaatg
     1321 tgggaaagcc tatatttgga gctcacacct tgctcgacat cagcgaattc atactggcag
     1381 gaaaccttat gaatgtaagc aatgcgggaa gacttttact tgggcttcgt atcttgctca
     1441 acatgagaaa attcacaatg agaggaaatc ctatgaatgt aaggaatgtg gaaagacctt
     1501 tcttcatggc tcagagttta atcgacatca gaaaattcat actggtgaga gaaactatga
     1561 atgtaaggaa tgtggaaaga ccttttttcg tggttcagaa cttaatcgac accagaaaat
     1621 tcatactgga aagaggccat atgaatgtga agaatgtgga aaagcctttc tctggggttc
     1681 acaacttact cgacatcaga gaatgcatac tggtgaggaa ccttacgtat gtaaagaatg
     1741 tgggaaatct tttatctggg gttcacagct tacacgacat aagaaaattc atactgatgc
     1801 agaaccttat ggatgcaaga aaagtagcca catctttagt caccattcat attttactga
     1861 acaaaaaatt cataatagtg caaatctctg tgaatggaca gactatggga acacctttag
     1921 tcatgagtca aactttgctc aacaccagaa tatttacact tttgagaaat cctatgaatt
     1981 taaagatttt gagaaagcat tttcttcaag ctctcacttc atttcactct tgtgaaatat
     2041 tatataaaag tgtaggaagg gctttattca tgactcatta attgatgtca tttatttttt
     2101 tctcttgagg aacaccacaa atgtaagtaa tattggaagg cattttaaca gagcacacat
     2161 ccagcagcag cagcagcagc agcagcagag aattcatcat gcaatcaata taggaaagaa
     2221 attactgatc agttatcaat tgcagaatat cagggtaaaa ttttatgaga tagcatgaat
     2281 tctttttgaa tcattctcaa aacattctca tcagagatgt tgcataaaga atttatatat
     2341 aatttggcca agcatggtgg ctcacacctg ttatcctagc actttgggaa acagaggtgg
     2401 gtggatcacc tgaggtcagg ggttcgagac cagcctgacc aacatggtga aaccctgtct
     2461 ctactaaata tacaaaaatt agccgggcgt ggtagcacac gcctgtagtc ccagctactc
     2521 gggaggccga ggcatgagaa ttccttgaac ctgggaggtg gaggttgcag tgagccaaga
     2581 tcacatcact gcactccagc ctgggtgata gaacaagact ccatctcaaa aacaaaaacc
     2641 cacaagaatt tatatataat tcattttgga aatctttcat cattagcaaa attctgttgt
     2701 atttccacaa aaatcatgta attaatctag aaaagccttg aactatgtca tacaatttat
     2761 ttggcatgtc ttgtttcaat acatcctgcc tctatttttt ttttttggaa agtatcttaa
     2821 atctatgtct gtttaatcgt attcattaga ttataagggt tgaatgattt gagatttaca
     2881 tgacttagtg actgtcattt gtattggtat taagccattt tatgagagga ggacttttaa
     2941 gactataatg attatagaca aatatgtcat ctctatttat gtcttactga acatcagaat
     3001 gttaattctg aaaaaaaatc agtaaaatac aatgaagaaa
//
