LOCUS       NM_001005851            8687 bp    mRNA    linear   PRI 09-FEB-2024
DEFINITION  Homo sapiens zinc finger protein 780B (ZNF780B), mRNA.
ACCESSION   NM_001005851 XM_092019
VERSION     NM_001005851.3
KEYWORDS    RefSeq; MANE Select.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 8687)
  AUTHORS   Grimwood,J., Gordon,L.A., Olsen,A., Terry,A., Schmutz,J.,
            Lamerdin,J., Hellsten,U., Goodstein,D., Couronne,O.,
            Tran-Gyamfi,M., Aerts,A., Altherr,M., Ashworth,L., Bajorek,E.,
            Black,S., Branscomb,E., Caenepeel,S., Carrano,A., Caoile,C.,
            Chan,Y.M., Christensen,M., Cleland,C.A., Copeland,A., Dalin,E.,
            Dehal,P., Denys,M., Detter,J.C., Escobar,J., Flowers,D.,
            Fotopulos,D., Garcia,C., Georgescu,A.M., Glavina,T., Gomez,M.,
            Gonzales,E., Groza,M., Hammon,N., Hawkins,T., Haydu,L., Ho,I.,
            Huang,W., Israni,S., Jett,J., Kadner,K., Kimball,H., Kobayashi,A.,
            Larionov,V., Leem,S.H., Lopez,F., Lou,Y., Lowry,S., Malfatti,S.,
            Martinez,D., McCready,P., Medina,C., Morgan,J., Nelson,K.,
            Nolan,M., Ovcharenko,I., Pitluck,S., Pollard,M., Popkie,A.P.,
            Predki,P., Quan,G., Ramirez,L., Rash,S., Retterer,J., Rodriguez,A.,
            Rogers,S., Salamov,A., Salazar,A., She,X., Smith,D., Slezak,T.,
            Solovyev,V., Thayer,N., Tice,H., Tsai,M., Ustaszewska,A., Vo,N.,
            Wagner,M., Wheeler,J., Wu,K., Xie,G., Yang,J., Dubchak,I.,
            Furey,T.S., DeJong,P., Dickson,M., Gordon,D., Eichler,E.E.,
            Pennacchio,L.A., Richardson,P., Stubbs,L., Rokhsar,D.S.,
            Myers,R.M., Rubin,E.M. and Lucas,S.M.
  TITLE     The DNA sequence and biology of human chromosome 19
  JOURNAL   Nature 428 (6982), 529-535 (2004)
   PUBMED   15057824
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC005614.1, CB053507.1, BC136960.1 and AC007842.1.
            
            On Nov 22, 2018 this sequence version replaced NM_001005851.2.
            
            Sequence Note: This RefSeq record was created from transcript and
            genomic sequence data to make the sequence consistent with the
            reference genome assembly. The genomic coordinates used for the
            transcript record were based on transcript alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: CB053506.1, CB053507.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA1965299, SAMEA1966682
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            MANE Ensembl match     :: ENST00000434248.6/ ENSP00000391641.1
            RefSeq Select criteria :: based on conservation, expression
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-23                AC005614.1         7483-7505           c
            24-43               CB053507.1         9-28
            44-2626             BC136960.1         1-2583
            2627-8687           AC007842.1         146502-152562       c
FEATURES             Location/Qualifiers
     source          1..8687
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /chromosome="19"
                     /map="19q13.2"
     gene            1..8687
                     /gene="ZNF780B"
                     /gene_synonym="ZNF779"
                     /note="zinc finger protein 780B"
                     /db_xref="GeneID:163131"
                     /db_xref="HGNC:HGNC:33109"
     exon            1..43
                     /gene="ZNF780B"
                     /gene_synonym="ZNF779"
                     /inference="alignment:Splign:2.1.0"
     exon            44..97
                     /gene="ZNF780B"
                     /gene_synonym="ZNF779"
                     /inference="alignment:Splign:2.1.0"
     CDS             89..2590
                     /gene="ZNF780B"
                     /gene_synonym="ZNF779"
                     /note="zinc finger protein 779"
                     /codon_start=1
                     /product="zinc finger protein 780B"
                     /protein_id="NP_001005851.1"
                     /db_xref="CCDS:CCDS46077.1"
                     /db_xref="GeneID:163131"
                     /db_xref="HGNC:HGNC:33109"
                     /translation="MVHGSVTFRDVAIDFSQEEWECLQPDQRTLYRDVMLENYSHLIS
                     LGSSISKPDVITLLEQEKEPWIVVSKETSRWYPDLESKYGPEKISPENDIFEINLPKH
                     VIKQISKTLGLEAFYFRNDSEYRSRFEGRQGHQEGYINQKIISYEEMPAYTHASPIHN
                     THKPYECKECGKYFSCGSNLIQHQSIHTGEKPYKCKECGKAFQLHIQLTRHQKFHTGE
                     KTFECKECGKAFNLPTQLNRHKNIHTVKKLFECKECGKSFNRSSNLTQHQSIHAGVKP
                     YQCKECGKAFNRGSNLIQHQKIHSNEKPFVCRECEMAFRYHYQLIEHCRIHTGEKPFE
                     CKECRKAFTLLTKLVRHQKIHMGEKPFECRECGKAFSLLNQLNRHKNIHTGEKPFECK
                     ECGKSFNRSSNLIQHQSIHADVKPYECKECGKGFNRGANLIQHQKIHSNEKPFVCREC
                     EMAFRYHYQLIQHCQIHTGGKPFECKECGKAFSLLTQLARHKNIHTGEKPFECKDCGK
                     AFNRGSNLVQHQSIHTGEKPYECKECGKAFRLHLQLSQHEKTHTGEKPFECKECGKFF
                     RRGSNLNQHRSIHTGKKPFECKECGKAFRLHMHLIRHQKFHTGEKPFECKECGKAFSL
                     HTQLNHHKNIHTGEKPFKCKECGKSFNRVSNLVQHQSIHAGVKPYECKECGKGFSRVS
                     NLIQHQKTHSSAKPFVCKECRKTFRYHYQLTEHYRIHTGEKPFECKECGKAFGLLTQL
                     AQHQIIHTGEKPFKCKECGKAFNRGSNLVQPQSIHTGEKPYECKECGKAFRLHLQLSL
                     HQKLVQVRNPLNVRNVGQPSDISSNLLNIRKFILG"
     exon            98..224
                     /gene="ZNF780B"
                     /gene_synonym="ZNF779"
                     /inference="alignment:Splign:2.1.0"
     exon            225..320
                     /gene="ZNF780B"
                     /gene_synonym="ZNF779"
                     /inference="alignment:Splign:2.1.0"
     exon            321..8687
                     /gene="ZNF780B"
                     /gene_synonym="ZNF779"
                     /inference="alignment:Splign:2.1.0"
     regulatory      6020..6025
                     /regulatory_class="polyA_signal_sequence"
                     /gene="ZNF780B"
                     /gene_synonym="ZNF779"
                     /note="hexamer: TATAAA"
     polyA_site      6044
                     /gene="ZNF780B"
                     /gene_synonym="ZNF779"
                     /note="major polyA site"
     regulatory      6786..6791
                     /regulatory_class="polyA_signal_sequence"
                     /gene="ZNF780B"
                     /gene_synonym="ZNF779"
                     /note="hexamer: AATAAA"
     polyA_site      6810
                     /gene="ZNF780B"
                     /gene_synonym="ZNF779"
     regulatory      7856..7861
                     /regulatory_class="polyA_signal_sequence"
                     /gene="ZNF780B"
                     /gene_synonym="ZNF779"
                     /note="hexamer: AATGAA"
     polyA_site      7874
                     /gene="ZNF780B"
                     /gene_synonym="ZNF779"
     regulatory      8663..8668
                     /regulatory_class="polyA_signal_sequence"
                     /gene="ZNF780B"
                     /gene_synonym="ZNF779"
                     /note="hexamer: AATAAA"
     polyA_site      8687
                     /gene="ZNF780B"
                     /gene_synonym="ZNF779"
ORIGIN      
        1 agcggttcca cttcctgtct cctggggttg acgacctagc tgggggagaa gcccgaggaa
       61 gattgaccaa ttttgtaatt ctagaaacat ggtccatgga tcagtgacat tcagggatgt
      121 ggccattgac ttctctcagg aggagtggga gtgcctgcag cctgatcaga ggaccttgta
      181 cagggatgtg atgttggaga actacagcca cctgatatca ctgggaagtt ccatttctaa
      241 gccagatgtg attacattac tagagcaaga gaaagagccc tggattgttg taagtaaaga
      301 aacaagcaga tggtatccag atttggagtc aaaatatgga cctgagaaaa tatctccaga
      361 aaatgatatt tttgaaataa atttacccaa acatgttata aagcaaataa gtaaaacact
      421 tggcctcgag gccttttatt ttagaaatga ctcagaatat agaagtagat ttgagggacg
      481 acagggacat caagaaggat atatcaacca gaagatcatc agctatgaag aaatgcctgc
      541 ttatactcat gcttctccta ttcataatac acataaacca tatgaatgta aggaatgtgg
      601 gaaatacttt agttgtggtt caaatcttat tcagcatcag agtattcata ctggagagaa
      661 accctataaa tgcaaagaat gtgggaaagc ctttcaactt cacatacaac ttactcgaca
      721 tcagaaattt catactggtg agaaaacttt tgaatgtaag gaatgtggaa aagcctttaa
      781 tcttcccacc cagcttaatc gccataagaa cattcacaca gttaagaaac tgtttgaatg
      841 taaggaatgt gggaagtctt ttaatcgtag ctcaaacctt actcagcatc aaagtattca
      901 tgctggtgta aaaccatatc aatgtaagga gtgtgggaaa gcctttaatc gtggttcaaa
      961 tcttattcag catcaaaaaa ttcattccaa tgagaaaccc tttgtatgta gggaatgtga
     1021 gatggccttt cgatatcatt accaactcat tgaacattgc cgaattcata ctggcgagaa
     1081 accctttgaa tgtaaagaat gcagaaaggc ctttactctt ctgacaaagc ttgttcgaca
     1141 tcagaagatt catatgggtg agaagccctt tgaatgcagg gaatgcggga aggcctttag
     1201 tctcctcaat cagcttaatc gccataagaa tattcacaca ggtgaaaaac catttgaatg
     1261 taaagaatgt gggaagtcct ttaatcgtag ttcaaacctt attcaacacc agagtattca
     1321 tgctgatgta aaaccatatg aatgtaagga gtgtgggaaa ggctttaatc gtggtgcaaa
     1381 tcttattcag catcaaaaaa ttcattccaa tgagaaaccc tttgtatgta gggaatgtga
     1441 gatggccttt cgatatcatt accaacttat tcaacattgc caaattcata ctggtgggaa
     1501 accctttgaa tgtaaagaat gtggaaaggc ctttagtctt ctgacacagc ttgctcgaca
     1561 taagaacatt catactggtg agaaaccatt tgaatgtaaa gactgtggga aggccttcaa
     1621 tcgtggctcg aaccttgttc aacatcagag tattcacact ggtgagaagc cctatgaatg
     1681 taaggagtgt gggaaggctt ttagacttca cctacaactt tctcaacatg agaaaactca
     1741 tacaggtgag aaaccctttg aatgtaagga atgtgggaaa ttctttcgtc gtggttcaaa
     1801 tcttaatcaa catcgaagta ttcataccgg aaagaaaccc tttgaatgta aggaatgtgg
     1861 gaaagccttt cgacttcata tgcaccttat tcgacatcag aaatttcata ctggtgagaa
     1921 gccctttgaa tgtaaggaat gtggcaaggc cttcagtctt cacacccagc ttaatcacca
     1981 taagaacatt cacacaggtg agaagccatt taaatgtaaa gaatgtggga agtcctttaa
     2041 tcgtgtctca aaccttgttc aacatcagag tattcatgct ggtgtaaaac catatgaatg
     2101 taaggagtgt gggaaaggct ttagtcgtgt ttcaaacctt attcagcatc agaaaactca
     2161 ttccagtgcg aaaccctttg tatgtaagga gtgtaggaag acctttagat atcattacca
     2221 gcttactgaa cattaccgaa ttcatactgg tgagaaaccc tttgaatgta aagaatgcgg
     2281 aaaggccttt ggtcttctga cacagcttgc tcaacatcag atcattcata ctggtgagaa
     2341 gccatttaaa tgtaaggagt gtgggaaggc ctttaatcgt ggctcaaacc ttgttcaacc
     2401 tcagagtatt catactggtg agaaacccta tgaatgtaag gagtgtggga aggcttttag
     2461 acttcaccta caactttctc tgcatcaaaa acttgtacag gtgagaaacc ctttgaatgt
     2521 aagaaatgtg ggacagcctt cagacatcag tagcaactta ctgaacatca gaaaattcat
     2581 acttgggtga aaacctttga atgtaaggaa tgtgggaagg cctttcaata tcattaccaa
     2641 tttcatggac attatagatt tcatattcgt gagaaccctt atgaatgtca aggatgtggg
     2701 aaatgcttta ccagtggtag aaaccttaga gtacatcaga gaattcatac tggtgagaaa
     2761 ccatatcaat gtgaagaatg tgggaaagcc tttagtcata gttcaaacct gttaaacatg
     2821 ttaaaattca tactgatgag aaaccctatg aatgtaagga atgtgaaaag gcctttagca
     2881 gtaattatga tcttactgta catctgagaa tccgtactgc tgagaaaccc tgtgagtgta
     2941 aagaatgtgg aaaacttttg gatttagctt agtctttact gcacatcaaa gaattcatac
     3001 tggtatgaac cgtatgaatg taaagaatgt ggaaagacct ttacttgtag ctcgagcctt
     3061 gttcaacatg ttaaaattca tactggtgag caaccctgtg aatgtaaagg atgtgggaag
     3121 acctttagac ttagttcagt cctttctgca catcacagaa ttcatactgg catgaaaccc
     3181 tatgaatgta aagaatgtga gcaaaccctt actgtgaatg atctgcttac gcaacatcag
     3241 aaaattcatt atagttagaa gttttatgaa tataaggagt gtagacaagc cttcactgtg
     3301 tatgaaaaat ttactcaaca ccagagaatt catattgatg agaaatcctg tgaacataaa
     3361 agaatgtgtg aagaactttc atcgtggcct gggatttgct caacatcaga gtattcatac
     3421 tgctgagaac tcctttgagt gtaaagaatg tgggatattt tatagccaca ctaaatgcct
     3481 tagagttcag agaagataat tttggtgaga aagttactga tgtgaggaat gtagagtagc
     3541 tgccatgttc acagtttact gcccgtgaaa tattttactg gatacaggcg taccttgctt
     3601 aattgtgcat tgcagttact gcattttata cacactgaag gtttgcagca accttgcagt
     3661 gaataagtct atcagcacca ttttccaaac agcatatgca catttcatgt ctttgtgtca
     3721 cactttgcta gttttcataa tatttcaaac tttttcattg ttaaatctgt tatggtgatc
     3781 tgtgaccagt gttttttgat tactagtgta attgttacta gtgtaattgt ttggggatac
     3841 cacaaatcct gcccataaaa gatggtgaac ctagttgata attgttgtgg gttttgaaag
     3901 aatagtaaaa tatatacaca tatccccccc acctagattc aaaattgtta acaatttgcc
     3961 acatttattt tttgtatatt tgttgtacca ttgagaataa gttttagacc attgagaata
     4021 agttttagat atcatgacac tttactcctt gttacatcag catgtgtgtt acccaaacat
     4081 aaagacaata tcatataacc atagtaccat aattaccctt aaggaaaata ttcataattc
     4141 tgtaatatca ttccatcttc agatttcttc cttggcctgc aaaccatctt ttacagctat
     4201 tcattttctc tttttttttt tttttttttg agatggagtc tcgctctgtc gcccagactg
     4261 gagtgcagtg gtgcgatctg ggctcactgc aagctctgcc tcctgggttc acgccattct
     4321 cccgcctcag cctcctgagt agctgggact agaggcaccc gccaccatgc ccagctaatt
     4381 ttttgtattt ttagtagaga cagggtttca ctctgttagc caggatggtc tcgatctcct
     4441 gacctcgtga tccacccgcc ttggcctccc aaagtgctgg gattacaggc atgagccagc
     4501 atgcctggcc tacagctatt cattttctaa ggagagtcca ttgcagattc tgcattgcat
     4561 ttggttatct ctctttagtg tattgtagca tggaaacccc atgaaagtat gctctcaaat
     4621 tatggtgggt atcagaatcc cctgtggaac ttagtaaacc tacagaagtg tagccctagt
     4681 ttataagcct gggcctctgt tttttattat ttctccaggt tttgtgtctg tgataccaac
     4741 cagagttaga gagccactgg tctagaacat ttctcatttt aaaaaaatga cattgaattt
     4801 tgagtagccc agaaatgttg ttggctatgt gtttagattt ctttctttat agtgtcattt
     4861 agccttgttc ttggttgtat tttctttaca agggaaagta agtccagagg ctttcttagg
     4921 tctagattaa acgttttggg gaagaatact ttgtaggtta tttctatgtc atattgtact
     4981 gtcagaaaac atttaagtac aggtccttgc attagtgaaa ctaaggatga tcatttgggt
     5041 aagctggtaa ccgccgtaag tccattgtaa agatttagtt tgtagtgggt aagtaatcta
     5101 tggagagacg ttgtcatctc tgaaaagtta tagtcacgtg tacttaagcc ctggattgaa
     5161 tacaaaatga aaattgaaat agactattga gaaatgaatg ccattaaagc gtcaacataa
     5221 ttcaacttgt gtgatatggc tgacactgta ctcagtacaa aactggcacc ctttggattg
     5281 tatagggagc caagattgtc cggaacctct tttttgttca gcatttatca ccagcaccta
     5341 taccatggct ggtacatgag ctgttgataa aaatttgaaa aaatattaac cctttaaatc
     5401 aagctgtaaa acatgatacc attaagccgg gagcagtggc ctcatgcctg taatcccagc
     5461 actttgggag gccaaggtgg gcagatcacc tgaggtcagg agtttgagac caacttggcc
     5521 aacatggcaa aactccatct ctcctaaaaa taaaaaaatt agctggacat ggtggtgcat
     5581 tcctgtaatc ccagctactt gggaggctga ggcaggagaa tcactcgaaa ttggaaggtg
     5641 gaggtggcag tgagccaaga tcgtgccact gcactccagc ctgggcgaca aagtgagact
     5701 tcatctcaaa aaaaccccaa aacaaaacat gataccgatg tggcatcatg aattagatta
     5761 aatttttttt aagattaaga ataatccttt gtgattttat tccattgtgt tgaaaaatct
     5821 ataaagtgat aatttatatt gatagctttc ttctttttat gaatataccc tggtcagatg
     5881 attattcttt caatagacta cttaattcta tcttttacca tttaattgca tctataatca
     5941 taagtaaagt tataattttc caagtatttt tcaggtattg atattgcaat gatgttatac
     6001 aacttataaa acaagattat ataaaacttg gctttcaaat cttatgttcc tattttttat
     6061 ttccagtttc atcttttttc tatccattct cttgaacttt cttctttgaa atcagcagag
     6121 tccctgggta ttaacctagc acaactcctt tctgggtcat tgcacatccc ggtagtatca
     6181 ttaagagttg tcagaaagat ccctggcagc ctttcggtga aactctatca tcatgcaatc
     6241 atggcagtac tatgttggaa gtcagagtcc ctttgcaaac ataataaaac actttaatat
     6301 atttgttaaa gttacaaacc aagtatgtac aaatttaaaa atcacggcca ggcacggtgg
     6361 ctcacgcctg taatccccaa cttaaaatgg tttgacttat aattttcagc tttataatag
     6421 tacaaaagtg atatgctgct atagtttgga tatttatccc ctccaaatct catattgaag
     6481 tttgatccca atgttggagg tggggcctaa tgggaggtgt gtgggtcatg ggagaagatc
     6541 cctcatgaat aaattaatgt cctctctgga ttggggggtg aattatcact ctgttagttc
     6601 ctatgagagc tggttgtaca aaagagcctg gcacctcctt cctcaccctc ttgcttcctc
     6661 tcttgccatg tgatgtctgc atacactgcc ccctttcatc tgccatgagt ggaagcagcc
     6721 tgaggccctt accagaagca gatgttgcac catgattctt gtaaatccta cagaacactg
     6781 agccaaataa acctctttct ttattaataa cccaacctca gacattcctt tatagcaaca
     6841 caaaactaag acatactcag tcagagtatg ctccttgact taaaatgggg ctatatctag
     6901 ataaacccat tgttaaattg aaaatattgt agaccataaa tgcacatatg gtgtatgatg
     6961 ttttcaattt atgatgggtt tatttggaca taactccccg taagttgaga agcacctgta
     7021 gtaattatta ttatttatgc tcaaattgac ataatgtggc cagtaggaat ccatttacat
     7081 ttttttttta ctacttattt ttttcttttg atgttttaaa ggaatattgt tttcaggccg
     7141 taagaggatg tttaagactg accctgtttg ttggttcatg tcccccatgc ctcttgtcct
     7201 gagtcatgga atcaactcat gatttaatac cctcttatct tagggagtcc tggttccttt
     7261 tagaggaaaa aagaattaga gaccaaaaaa tctggctgct gtgagtgcac atggcagtta
     7321 caggtatgga aaaaaagatg ctgcttttgt tagaattctt ttaatagttt cagagttgaa
     7381 aatgtcatcc taaggtcaga agttccctct gaattttctc aacttacatt tctatgatct
     7441 gctcttgttt gcatttggta ttttattgaa ttatgtttta tgtatggtga tagctgagaa
     7501 gtttatctcc ttttaaggcc tggctgaaat gatacattaa tctgcctccc atttttggag
     7561 atattgctct gatttaaatt tgtcatggtg tttctgagca gcgttgtaaa gaaacttgtt
     7621 ttagaatatt cagtcatgga tgttatcttg aatgttcata gactccccag aaaagaagaa
     7681 aaagtagaca caagatttct gtcatccttt tacagggtat tgtgatcatc cagcttgggg
     7741 tatgagggat aacggacctg tgtgtcttaa tttccagaat accattccat ttcaatgagt
     7801 cttctgcaca agttgtggtc tcagggattc actgtcttca tttgtaattg atcaaaatga
     7861 aaccatctcc aggattcctc agtgggtcag gatctgttat ttattaggcc cgcatatcca
     7921 ttctaccctg ctttcatgat tatagaacca gtaattttta ttgatagttg gctgtgacta
     7981 tctagaataa ggactgcagt tatttctcca aggtgttgtc atgtgacata acttatggca
     8041 agtaggatgt aagtgaatat tttggcaatt ctggaaacct cttaaaacaa actagcttaa
     8101 tatattaata tttgagaaat ctgggtgaag ggtaaccaga attatttact attcttccaa
     8161 gttctgtata agtctgagtg ctcattccat tctgatgcca gaatggtaaa attcatgatt
     8221 ggtttagagc aaggccacag tatcaggctt acatccatat tatatgacag agaaattaac
     8281 ttttattata ttttatccac tttaatttgg ggcagtttta ctattttact cacaaccaaa
     8341 tttaatctta aacgctacaa ctagattgtc acatgtaaaa agtaataacc atcattatat
     8401 cttttatgtt ctgtaattcc aaagcacgga tctgtagaga acagagtgtc tatcccatgc
     8461 atgttgtcat gtacttatcc cacaccctat tgaaatcaca gtacccataa gggagacatt
     8521 ttttttcttc aagaatatgt atttctgcca catctatgat tctccagaat gagatgacag
     8581 aaaatgctaa actattgtta aatgactata tgtagttcca cttctggatg gtagatgggg
     8641 gggctctgca aactcatttt ctaataaaac tggcaaaaaa aaatgta
//
