LOCUS       NM_152601               4897 bp    mRNA    linear   PRI 04-APR-2024
DEFINITION  Homo sapiens zinc finger protein 709 (ZNF709), mRNA.
ACCESSION   NM_152601
VERSION     NM_152601.4
KEYWORDS    RefSeq; MANE Select.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 4897)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
REFERENCE   2  (bases 1 to 4897)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc Natl Acad Sci U S A 99 (26), 16899-16903 (2002)
   PUBMED   12477932
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            BX954970.1, DA493682.1, AC008758.7 and BQ027911.1.
            
            On Nov 22, 2018 this sequence version replaced NM_152601.3.
            
            Sequence Note: This RefSeq was created from transcript and genomic
            sequence data to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on transcript alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: DC351830.1, SRR1803615.87868.1
                                           [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMN03267750, SAMN03267752
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            MANE Ensembl match     :: ENST00000397732.8/ ENSP00000380840.3
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-269               BX954970.1         4-272
            270-573             DA493682.1         253-556
            574-4895            AC008758.7         168719-173040       c
            4896-4897           BQ027911.1         18-19               c
FEATURES             Location/Qualifiers
     source          1..4897
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /chromosome="19"
                     /map="19p13.2"
     gene            1..4897
                     /gene="ZNF709"
                     /note="zinc finger protein 709"
                     /db_xref="GeneID:163051"
                     /db_xref="HGNC:HGNC:20629"
     exon            1..162
                     /gene="ZNF709"
                     /inference="alignment:Splign:2.1.0"
     CDS             160..2085
                     /gene="ZNF709"
                     /codon_start=1
                     /product="zinc finger protein 709"
                     /protein_id="NP_689814.1"
                     /db_xref="CCDS:CCDS42504.1"
                     /db_xref="GeneID:163051"
                     /db_xref="HGNC:HGNC:20629"
                     /translation="MDSVVFEDVAVNFTQEEWALLGPSQKKLYRDVMQETFVNLASIG
                     ENWEEKNIEDHKNQGRKLRSHMVERLCERKEGSQFGETISQTPNPKPNKKTFTRVKPY
                     ECSVCGKDYMCHSSLNRHMRSHTEHRSYEYHKYGEKSYECKECGKRFSFRSSFRIHER
                     THTGEKPYKCKQCGKAFSWPSSFQIHERTHTGEKPYECKECGKAFIYHTTFRGHMRMH
                     TGEKPYKCKECGKTFSHPSSFRNHERTHSGEKPYECKQCGKAFRYYQTFQIHERTHTG
                     EKPYQCKQCGKALSCPTSFRSHERIHTGEKPYKCKKCGKAFSFPSSFRKHERIHTGEK
                     PYDCKECGKAFISLPSYRRHMIMHTGNGPYKCKECGKAFDCPSSFQIHERTHTGEKPY
                     ECKQCGKAFSCSSSFRMHERTHTGEKPHECKQCGKAFSCSSSVRIHERTHTGEKPYEC
                     KQCGKAFSCSSSFRMHERIHTGEKPYECKQCGKAFSFSSSFRMHERTHTGEKPYECKQ
                     CGKAFSCSSSFRMHERTHTGEKPYECKQCGKAFSCSSSIRIHERTHTGEKPYECKQCG
                     KAFSCSSSVRMHERTHTGVKPYECKQCDKAFSCSRSFRIHERTHTGEKPYACQQCGKA
                     FKCSRSFRIHERVHSGE"
     exon            163..289
                     /gene="ZNF709"
                     /inference="alignment:Splign:2.1.0"
     exon            290..347
                     /gene="ZNF709"
                     /inference="alignment:Splign:2.1.0"
     exon            348..4897
                     /gene="ZNF709"
                     /inference="alignment:Splign:2.1.0"
     regulatory      4497..4502
                     /regulatory_class="polyA_signal_sequence"
                     /gene="ZNF709"
                     /note="hexamer: AATAAA"
     polyA_site      4523
                     /gene="ZNF709"
                     /note="major polyA site"
     regulatory      4873..4878
                     /regulatory_class="polyA_signal_sequence"
                     /gene="ZNF709"
                     /note="hexamer: ATTAAA"
     polyA_site      4897
                     /gene="ZNF709"
ORIGIN      
        1 gcaaacggcg agggcgtggc taccagccgc tgcgctccgc tctggggtct cctcacccca
       61 gaaggccctc aggtggagga agggcctcag gtggaggtag gacctgtgct ggccgcggga
      121 gaggtaaaca gaacaccagg acatcccaga gtctgggaaa tggactcagt ggtctttgag
      181 gatgtggctg tgaacttcac ccaggaggag tgggctttgc tgggtccctc tcagaagaaa
      241 ctctacagag atgtgatgca agaaaccttt gttaacttgg cctctatagg ggaaaactgg
      301 gaggagaaga acattgaaga tcacaaaaat caggggagaa agctaagaag tcatatggta
      361 gagaggctct gtgaaaggaa agaaggtagt cagtttggag aaaccatcag tcagactcca
      421 aatcctaaac caaacaagaa aacttttact agagtaaaac catatgaatg tagtgtgtgt
      481 ggaaaggact atatgtgtca ttcatctctt aataggcaca tgagatctca tactgaacat
      541 agatcatatg aatatcacaa atatggagag aaatcatatg aatgtaagga atgtgggaaa
      601 agattcagct ttcgaagttc atttcgaata catgaaagaa ctcacactgg agagaaaccc
      661 tataaatgta aacagtgtgg taaggctttc agttggccca gttcctttca aatacatgaa
      721 agaactcata ctggagagaa accttatgaa tgtaaggaat gtgggaaggc cttcatttat
      781 cacacaacct ttcgaggaca catgagaatg cacacagggg agaaacccta taaatgtaaa
      841 gaatgcggga aaacgttcag tcatcccagt tcttttcgaa atcatgaaag aactcactct
      901 ggagagaaac cctatgaatg taaacaatgt ggaaaagctt tcagatatta ccaaactttt
      961 caaatacatg aaaggactca cactggggaa aaaccctatc agtgtaagca atgtggtaaa
     1021 gctcttagtt gtcccacatc ctttcgaagt catgaaagga ttcacactgg agaaaaaccc
     1081 tataaatgta aaaaatgtgg gaaagccttc agttttccta gttcctttag aaaacatgaa
     1141 agaattcata caggagagaa accctatgat tgtaaggaat gtgggaaagc attcatttct
     1201 cttccaagct atcgaagaca tatgataatg cacactggaa atggacctta taaatgcaag
     1261 gaatgtggga aagcctttga ttgtcctagt tcttttcaaa tccatgaacg aactcacact
     1321 ggagagaaac cctatgaatg taaacagtgt ggtaaagcct tcagttgttc cagttccttt
     1381 cgaatgcatg aaagaactca cactggagag aaaccccatg aatgtaaaca atgtggtaaa
     1441 gccttcagtt gttccagttc tgttcgaata catgaaagga ctcacactgg agagaaaccc
     1501 tatgaatgta aacagtgtgg taaagccttc agttgttcca gttcctttcg aatgcatgaa
     1561 agaattcaca ctggagagaa accctatgaa tgtaaacagt gtggtaaagc ctttagtttt
     1621 tctagttcct ttcggatgca tgaaaggact cacactggag agaaacccta tgaatgtaaa
     1681 caatgtggta aagccttcag ttgttccagt tcctttcgaa tgcatgaaag gactcacact
     1741 ggggagaaac cctatgaatg taaacagtgt ggtaaggcgt ttagttgttc cagttccatt
     1801 cgaatacatg aaaggactca cactggagag aaaccttatg agtgtaaaca atgtggtaag
     1861 gccttcagtt gttctagttc tgttcgaatg catgaaagga ctcacactgg agtgaaaccc
     1921 tatgaatgta aacaatgtga caaagccttc agttgctcac gttcctttcg aatccatgaa
     1981 cgaactcaca ctggagagaa accctatgca tgtcaacaat gtggtaaagc cttcaagtgt
     2041 tcccgttcct ttcgaataca tgaaagagtt catagtggag agtaacccta tgtatataag
     2101 caatatggca aagttttcag ttgtcctatt tccttttttt tttttttttt ttttgagttg
     2161 aattctcact ctgttgccct ggctggagtg cagtagagtg atctcagctc actgcaacct
     2221 ctgtctcctg ggttcaagcg attctcctgc ctcagcttcc tgagtagctg ggacaacagg
     2281 tgtgaacgac catgcccact taatttttgt atttttagta gagatggggt ttcgccatgt
     2341 tggccaggct ggtctcgaac tcctgacctc agacgatcca cctgccttgg cctcccaaag
     2401 tgttggatta caggtgtgag ccaccacacc cggcccccat ttccttttga agacatgaaa
     2461 ttattcatat ttcagagaaa ccctataaga catgggaata ccttcagtta tttacatgtg
     2521 aatatgagga agcattcata ctggacagga aaccctgcga atgtaggcag tgtgggaaaa
     2581 ccttcaatgg tcatatgacc ttttaaggac catgagaagg catatgaagt gtaaagaatt
     2641 ttcatatgcc ctataaatgt aaagaattta taaccttaaa aatgtaaaga atgtggaaaa
     2701 ccctataaat gtaaaaaatg tagaaaaacc tttatttgtc ttagtttact tggaaaccat
     2761 gaacaaactc acactggaaa gcgacttctt aaatatagac attgtgagaa agccttcagt
     2821 tggcccacat actaatatgt gagaatgcag actggataga aatcctataa aagtgagata
     2881 tagcaatgtt ttccatttta acaaatgctc atgtgatact cccttatgtg tgaaacttca
     2941 atctcatgtt gaaactccca ctagggaggt actgtataaa tgtagataat atgggaaagc
     3001 ctgatgcaaa ttaattcatg tatattgttc tagaaaattc acaacatgtc agaaatgtga
     3061 taaaacatat tatcagttac tgattcttaa aatggatctc tgaattatgg atttctatta
     3121 ctttcacaaa agaacactga gatgagataa ttctgtaagc tcttatacag ttgtacacaa
     3181 gttgaattga tagtattttt tcattaaatc agtttctgaa attttgtctt tccatattga
     3241 agtctgttag attcatgagt gaattgaagt gtatttataa taagctagca gttttgattt
     3301 ttatgtattt tttagttgtg ctgtaatggg ccatcaaaaa atgacaattt ggtaattttt
     3361 aggatttcct actggcctta tgtggcaggt actagatatc attatatgta tttcatcttt
     3421 ctgaccaaaa gaggcttttt tagaggaaga cagagtaccc ttttttctat tttttatgct
     3481 aaaaaataat cataataaat ttttgagtct gcaaagttta tcatacagta tactctctca
     3541 ttggaattat tattttcatc ttctgtttgc tgtttgtaat tccttctggc tgtgatttga
     3601 ataatagact ttgtattaat aagagagatc tgagatagaa ccatataacc tatagctgga
     3661 aatggctgtc ctggattgtg ttaacatggg ttatgttgtg acctatgttt tctataatct
     3721 aaccttttat ggctccacgg tataattcac caatagccta cttgcaggag atatggaagg
     3781 cagaagtgaa gaaagcatta gtcaggtttt atagccacca tatgtggaga cagatggatg
     3841 cataggagct tcagggacac ctgcttccac cacattgtcc tgatcctttg ctctgccaat
     3901 tgagagtatt cttagaacca ccactaactg cttgactgcc atattttcct tccttccttc
     3961 cttctttctt tccctttccc tttcttttct ttctttactt tctttttccg agatggagtc
     4021 ttgctctgtc gcccaggctg gagtgcagtg gtacgatctt ggctcactgc aacctctgcc
     4081 ttctgggttc aagcaattgt cctgccccag cctcccaagt agctgggatt ataggtgccc
     4141 accaccaagc ccagctaaat tttttttgta tttttagtag agacagggtt tcatcattgt
     4201 tggccaggct ggtctcaaac tcctgacctc atgatctgcc caccttggcc ttccaaagtg
     4261 ctgagattac aggcgtgagc cactgtgcat ggccccagct gccatatttt caaagatgta
     4321 gttttccaca aattgtcttc aaaagttcta ctcaaagatg cactgcagtt tggattttcc
     4381 tagaaactct aatgtgtcca ccaggcaacc atttagactc ttaaggttgg gaatattctc
     4441 tgatgctctg actcacctca tctctaggtt gaatttatcc aaggtattat ttatgtaata
     4501 aacaccatgt tttgttaaca gtaccagtga ctatgtgttt ctgattccac cgtgacaact
     4561 acagtggtgc agtcaaaaag aactacatgg gtgtctgctt ctccactgca ctgtgcaggg
     4621 aatgcactta cccagtccta cagtgtaaga ataagcacct tcctaatatc aagcagattg
     4681 tcggtgtttc ctattacagt tgaatgtcat ctctcagtac attttcaatt ttgtttcatt
     4741 atatgtgatt aaaaaccatg tgtatgtttt tgttgaacaa aagcttctgt agatgtttct
     4801 tagaaatatt ttattaactt ttcaaataac ttgtatgcta tcacttgtct atttaatttt
     4861 ctgcaaggat atattaaaat attccattgc aattata
//
