LOCUS       NM_033196               3244 bp    mRNA    linear   PRI 09-FEB-2024
DEFINITION  Homo sapiens zinc finger protein 682 (ZNF682), transcript variant
            1, mRNA.
ACCESSION   NM_033196
VERSION     NM_033196.3
KEYWORDS    RefSeq; MANE Select.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 3244)
  AUTHORS   Grimwood,J., Gordon,L.A., Olsen,A., Terry,A., Schmutz,J.,
            Lamerdin,J., Hellsten,U., Goodstein,D., Couronne,O.,
            Tran-Gyamfi,M., Aerts,A., Altherr,M., Ashworth,L., Bajorek,E.,
            Black,S., Branscomb,E., Caenepeel,S., Carrano,A., Caoile,C.,
            Chan,Y.M., Christensen,M., Cleland,C.A., Copeland,A., Dalin,E.,
            Dehal,P., Denys,M., Detter,J.C., Escobar,J., Flowers,D.,
            Fotopulos,D., Garcia,C., Georgescu,A.M., Glavina,T., Gomez,M.,
            Gonzales,E., Groza,M., Hammon,N., Hawkins,T., Haydu,L., Ho,I.,
            Huang,W., Israni,S., Jett,J., Kadner,K., Kimball,H., Kobayashi,A.,
            Larionov,V., Leem,S.H., Lopez,F., Lou,Y., Lowry,S., Malfatti,S.,
            Martinez,D., McCready,P., Medina,C., Morgan,J., Nelson,K.,
            Nolan,M., Ovcharenko,I., Pitluck,S., Pollard,M., Popkie,A.P.,
            Predki,P., Quan,G., Ramirez,L., Rash,S., Retterer,J., Rodriguez,A.,
            Rogers,S., Salamov,A., Salazar,A., She,X., Smith,D., Slezak,T.,
            Solovyev,V., Thayer,N., Tice,H., Tsai,M., Ustaszewska,A., Vo,N.,
            Wagner,M., Wheeler,J., Wu,K., Xie,G., Yang,J., Dubchak,I.,
            Furey,T.S., DeJong,P., Dickson,M., Gordon,D., Eichler,E.E.,
            Pennacchio,L.A., Richardson,P., Stubbs,L., Rokhsar,D.S.,
            Myers,R.M., Rubin,E.M. and Lucas,S.M.
  TITLE     The DNA sequence and biology of human chromosome 19
  JOURNAL   Nature 428 (6982), 529-535 (2004)
   PUBMED   15057824
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC006539.1, DA612976.1, DA788529.1 and DR002650.1.
            
            On Nov 22, 2018 this sequence version replaced NM_033196.2.
            
            Transcript Variant: This variant (1) represents the longer
            transcript and it encodes the longer protein (isoform 1).
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR1660809.239505.1,
                                           SRR1803612.10160.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA2154405 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            MANE Ensembl match     :: ENST00000397165.7/ ENSP00000380351.1
            RefSeq Select criteria :: based on expression
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-37                AC006539.1         68225-68261         c
            38-67               DA612976.1         2-31
            68-163              DA788529.1         26-121
            164-773             DR002650.1         97-706
            774-3244            AC006539.1         33174-35644         c
FEATURES             Location/Qualifiers
     source          1..3244
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /chromosome="19"
                     /map="19p12"
     gene            1..3244
                     /gene="ZNF682"
                     /gene_synonym="BC39498_3"
                     /note="zinc finger protein 682"
                     /db_xref="GeneID:91120"
                     /db_xref="HGNC:HGNC:28857"
     exon            1..163
                     /gene="ZNF682"
                     /gene_synonym="BC39498_3"
                     /inference="alignment:Splign:2.1.0"
     CDS             161..1657
                     /gene="ZNF682"
                     /gene_synonym="BC39498_3"
                     /note="isoform 1 is encoded by transcript variant 1"
                     /codon_start=1
                     /product="zinc finger protein 682 isoform 1"
                     /protein_id="NP_149973.1"
                     /db_xref="CCDS:CCDS42533.1"
                     /db_xref="GeneID:91120"
                     /db_xref="HGNC:HGNC:28857"
                     /translation="MELLTFRDVTIEFSLEEWEFLNPAQQSLYRKVMLENYRNLVSLG
                     LTVSKPELISRLEQRQEPWNVKRHETIAKPPAMSSHYTEDLLPEQCMQDSFQKVILRR
                     YGSCGLEDLHLRKDGENVGECKDQKEIYNGLNQCLSTLPSKIFPYNKCVKVFSKSSNL
                     NRENIRHTTEKLFKCMQCGKVFKSHSGLSYHKIIHTEEKLCICEECGKTFKWFSYLTK
                     HKRIHTGEKPYKCEECGKAFNWCSSLTKHKRIHTGEKPYKCEECGKAFHWCSPFVRHK
                     KIHTGEKPYTCEDCGRAFNRHSHLTKHKTIHTGKKPYKCKECGKAFNHCSLLTIHERT
                     HTGEKPYKCEECGKAFNSSSILTEHKVIHSGEKPYKCEKCDKVFKRFSYLTKHKRIHT
                     GEKPYKCEECGKAFNWSSILTEHKRIHTGEKPYNCEECGKAFNRCSHLTRHKKIHTAV
                     KRYKCEECGKAFKRCSHLNEHKRVQRGEKSCKYKKCGEAFNHCSNLTT"
     exon            164..290
                     /gene="ZNF682"
                     /gene_synonym="BC39498_3"
                     /inference="alignment:Splign:2.1.0"
     exon            291..386
                     /gene="ZNF682"
                     /gene_synonym="BC39498_3"
                     /inference="alignment:Splign:2.1.0"
     exon            387..3244
                     /gene="ZNF682"
                     /gene_synonym="BC39498_3"
                     /inference="alignment:Splign:2.1.0"
     regulatory      3217..3222
                     /regulatory_class="polyA_signal_sequence"
                     /gene="ZNF682"
                     /gene_synonym="BC39498_3"
                     /note="hexamer: AATAAA"
     polyA_site      3244
                     /gene="ZNF682"
                     /gene_synonym="BC39498_3"
                     /note="major polyA site"
ORIGIN      
        1 gcctttgtct cgctccagcc agagctcagg gtccatcttc attgcttagt atcctctgct
       61 ctagtagttc ccggtgactg tcgcagcctc tgttgccctc tgacttgcag atgctgtgag
      121 atccagagct aagactccac gacatcccgg aagccgaaaa atggaactgt tgacattcag
      181 ggatgtgacc atagaattct ctctggagga gtgggagttt ctgaaccctg ctcagcagag
      241 tttgtatagg aaagtgatgc tagagaacta cagaaacctg gtctctctgg gtcttactgt
      301 ttctaagcca gaactgatta gccgtctgga gcaaagacag gagccctgga atgtgaagag
      361 acatgagacc atagccaaac ccccagctat gtcttctcat tacactgaag accttttgcc
      421 agaacagtgc atgcaagatt cattccaaaa agtgatactg agaagatatg gaagctgtgg
      481 acttgaggat ttacacttaa ggaaggatgg ggaaaatgtg ggtgagtgta aggatcaaaa
      541 agaaatttat aatggactta accaatgttt gtcaactcta cctagcaaaa ttttcccata
      601 taataaatgt gtgaaagtct ttagtaaatc atcaaatcta aatagagaaa acataagaca
      661 tactacagag aaacttttca aatgtatgca atgtggcaaa gtctttaaat ctcactcagg
      721 cctttcttat cataagataa ttcacactga agagaaactc tgcatatgtg aggaatgtgg
      781 caaaaccttt aagtggttct cataccttac taaacataag agaattcaca ctggagagaa
      841 accatacaaa tgtgaagaat gtggcaaagc ttttaactgg tgctcgagtc ttactaaaca
      901 taagagaatc catactggtg agaaacccta caaatgtgaa gaatgtggaa aagcctttca
      961 ctggtgttca ccctttgtta gacataagaa aattcataca ggagaaaaac cctatacatg
     1021 tgaagactgt ggcagagcgt ttaaccggca ctcacatctc accaaacata agacaattca
     1081 cactggaaag aaaccctaca aatgtaaaga atgtgggaaa gcctttaacc actgctcact
     1141 acttactata catgagagaa cccatacggg agagaaaccc tataaatgtg aagaatgtgg
     1201 caaagctttt aactcatcat caattcttac tgaacataag gtaattcata gcggagagaa
     1261 accctacaaa tgtgaaaaat gtgacaaagt ctttaagagg ttctcatacc ttactaaaca
     1321 caagagaatt cacactggag agaaacccta caaatgtgaa gaatgtggca aagcttttaa
     1381 ctggtcctca atccttactg aacataagag aattcatact ggagagaaac cctacaactg
     1441 tgaagaatgt ggaaaagcct ttaatcggtg ctcacacctt actagacata agaaaattca
     1501 tactgccgtc aaacgctata aatgtgaaga atgtggcaaa gcttttaaac ggtgctcaca
     1561 tcttaatgaa cataagagag ttcaaagagg agagaaatcc tgcaagtata aaaaatgtgg
     1621 ggaagctttt aatcactgct caaaccttac tacgtaagaa tttttactaa agagaaatcc
     1681 tacaaatgta aagaatgtgg caaattccat aaatcttgct caaggcattg aaatcacaag
     1741 ataattcata ctggagagaa acactacaaa tgtgaagaat gtggggaaag tcttcaacca
     1801 ttgctgacag cttattgcac agaagaaaat tcatgctgag aaaaattctg attttaaaga
     1861 atgtggcaaa gcatttaata actactatga acttactcat cagaggtttt gtgctagata
     1921 aaagcaatgt aagtgtaatg atacacatta catttatctg tggaaagatg tcaccaaata
     1981 aaagccttag agtacacaag gtgtaatgat agtgatacat tacatttgta catggaaaga
     2041 cttcaaaaat ataagcctta gagtacacaa gagtttttat actgaagaaa aacattacaa
     2101 atataaagat tgttgcaata cttttactta tgttacagat tttgttgtac ataggagaat
     2161 ttatactgaa aggtaaccct ctaacagttg ctcaaatttt attccatttt agataattta
     2221 cattggaaag aaaccctaca actgtaatga atatgaaaaa aattgtttaa aaagtacacc
     2281 ttagaaaaca ctagtttaag gccgggcgcg gtggctcaca cttataatcc cagcactttg
     2341 ggaggccgag gcaggcggat cacgaggtca ggagatcgag accacgatga aaccctgtct
     2401 ctactaaaaa tacaaaaaat tagctgggca tgttgtcggg tgcctgtagt cccagctact
     2461 gggagaggct gaggcaggag aatggcgtga acccgagagg cggagcttgc agtgagccga
     2521 gatcgcgcca ctgaactcca acctgggcga cagagactct gtctcaaaaa aaaagaaaga
     2581 acgctagttt atatgaaagc atttaacaga tgcagtaaat ataaaaaatt aataaaaaat
     2641 taagtctaaa tgaacatcag aagattcaca gtagaaacca ctaagacgct aacactttca
     2701 atgttattct aaatcagggc attgattata aagagtaatt caaggttaac ataatttagt
     2761 tagcctaaac agaaatagga gattaatatt ttgagactta aacaattata ttcaaagtac
     2821 actttttgca ttgaaagaat tttagatttt tacaaaggca aattttgatg taattgaact
     2881 ctcaaattac ttgatgctgt gtctttattc ctagtgtctg tatgaaagca tgtggtcaat
     2941 ttctgctgct cggggtttga gaagttctat attaggatgt catttacata cttttcaaca
     3001 gaagattgag gacactgaaa tatgaggtgt gtgaagaaag tacacagaga aacttttgtg
     3061 gttgacttat aaaacttgta agtgctgcat gagatagatg ttcagagtaa tagtcttgtg
     3121 cattattcaa attttagtaa attgttttac caattgcaca ttagatagta tagtggattt
     3181 tgtaatgctt ttcttagact gtgtgaactt agtttcaata aaacaattat ttttaatgtg
     3241 ttaa
//
