LOCUS       NM_001322917            2802 bp    mRNA    linear   PRI 04-APR-2024
DEFINITION  Homo sapiens zinc finger protein 567 (ZNF567), transcript variant
            9, mRNA.
ACCESSION   NM_001322917 XM_011526576
VERSION     NM_001322917.1
KEYWORDS    RefSeq; MANE Select.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 2802)
  AUTHORS   Luck,K., Kim,D.K., Lambourne,L., Spirohn,K., Begg,B.E., Bian,W.,
            Brignall,R., Cafarelli,T., Campos-Laborie,F.J., Charloteaux,B.,
            Choi,D., Cote,A.G., Daley,M., Deimling,S., Desbuleux,A., Dricot,A.,
            Gebbia,M., Hardy,M.F., Kishore,N., Knapp,J.J., Kovacs,I.A.,
            Lemmens,I., Mee,M.W., Mellor,J.C., Pollis,C., Pons,C.,
            Richardson,A.D., Schlabach,S., Teeking,B., Yadav,A., Babor,M.,
            Balcha,D., Basha,O., Bowman-Colin,C., Chin,S.F., Choi,S.G.,
            Colabella,C., Coppin,G., D'Amata,C., De Ridder,D., De Rouck,S.,
            Duran-Frigola,M., Ennajdaoui,H., Goebels,F., Goehring,L., Gopal,A.,
            Haddad,G., Hatchi,E., Helmy,M., Jacob,Y., Kassa,Y., Landini,S.,
            Li,R., van Lieshout,N., MacWilliams,A., Markey,D., Paulson,J.N.,
            Rangarajan,S., Rasla,J., Rayhan,A., Rolland,T., San-Miguel,A.,
            Shen,Y., Sheykhkarimli,D., Sheynkman,G.M., Simonovsky,E., Tasan,M.,
            Tejeda,A., Tropepe,V., Twizere,J.C., Wang,Y., Weatheritt,R.J.,
            Weile,J., Xia,Y., Yang,X., Yeger-Lotem,E., Zhong,Q., Aloy,P.,
            Bader,G.D., De Las Rivas,J., Gaudet,S., Hao,T., Rak,J.,
            Tavernier,J., Hill,D.E., Vidal,M., Roth,F.P. and Calderwood,M.A.
  TITLE     A reference map of the human binary protein interactome
  JOURNAL   Nature 580 (7803), 402-408 (2020)
   PUBMED   32296183
REFERENCE   2  (bases 1 to 2802)
  AUTHORS   Fragoza,R., Das,J., Wierbowski,S.D., Liang,J., Tran,T.N., Liang,S.,
            Beltran,J.F., Rivera-Erick,C.A., Ye,K., Wang,T.Y., Yao,L., Mort,M.,
            Stenson,P.D., Cooper,D.N., Wei,X., Keinan,A., Schimenti,J.C.,
            Clark,A.G. and Yu,H.
  TITLE     Extensive disruption of protein interactions by genetic variants
            across the allele frequency spectrum in human populations
  JOURNAL   Nat Commun 10 (1), 4141 (2019)
   PUBMED   31515488
  REMARK    Publication Status: Online-Only
REFERENCE   3  (bases 1 to 2802)
  AUTHORS   Yu,H., Tardivo,L., Tam,S., Weiner,E., Gebreab,F., Fan,C.,
            Svrzikapa,N., Hirozane-Kishikawa,T., Rietman,E., Yang,X.,
            Sahalie,J., Salehi-Ashtiani,K., Hao,T., Cusick,M.E., Hill,D.E.,
            Roth,F.P., Braun,P. and Vidal,M.
  TITLE     Next-generation sequencing to generate interactome datasets
  JOURNAL   Nat Methods 8 (6), 478-480 (2011)
   PUBMED   21516116
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC074138.5.
            
            On Apr 15, 2016 this sequence version replaced XM_011526576.1.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR1803612.156944.1,
                                           SRR1660809.42008.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA1965299, SAMEA1968968
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            MANE Ensembl match     :: ENST00000682579.1/ ENSP00000507048.1
            RefSeq Select criteria :: based on manual assertion, conservation,
                                      expression
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-23                AC074138.5         139908-139930
            24-124              AC074138.5         141693-141793
            125-199             AC074138.5         147098-147172
            200-326             AC074138.5         164682-164808
            327-413             AC074138.5         165077-165163
            414-2802            AC074138.5         171244-173632
FEATURES             Location/Qualifiers
     source          1..2802
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /chromosome="19"
                     /map="19q13.12"
     gene            1..2802
                     /gene="ZNF567"
                     /note="zinc finger protein 567"
                     /db_xref="GeneID:163081"
                     /db_xref="HGNC:HGNC:28696"
     exon            1..23
                     /gene="ZNF567"
                     /inference="alignment:Splign:2.1.0"
     exon            24..124
                     /gene="ZNF567"
                     /inference="alignment:Splign:2.1.0"
     exon            125..199
                     /gene="ZNF567"
                     /inference="alignment:Splign:2.1.0"
     CDS             191..2134
                     /gene="ZNF567"
                     /note="isoform 1 is encoded by transcript variant 9"
                     /codon_start=1
                     /product="zinc finger protein 567 isoform 1"
                     /protein_id="NP_001309846.1"
                     /db_xref="CCDS:CCDS74349.1"
                     /db_xref="GeneID:163081"
                     /db_xref="HGNC:HGNC:28696"
                     /translation="MAQGSVSFNDVTVDFTQEEWQHLDHAQKTLYMDVMLENYCHLIS
                     VGCHMTKPDVILKLERGEEPWTSFAGHTCLEENWKAEDFLVKFKEHQEKYSRSVVSIN
                     HKKLVKEKSKIYEKTFTLGKNPVNSKNLPPEYDTHGRILKNVSELIISNLNPARKRLS
                     EYNGYGKSLLSTKQETTHPEVKSHNQSARAFSHNEVLMQYQKTETPAQSFGYNDCEKS
                     FLQRGGLITHSRPYKGENPSVYNKKRRATNIEKKHTCNECGKSFCRKSVLILHQGIHS
                     EEKPYQCHQCGNAFRRKSYLIDHQRTHTGEKPFVCNECGKSFRLKTALTDHQRTHTGE
                     KSYECLQCRNAFRLKSHLIRHQRTHTGEKPYECNDCGKSFRQKTTLSLHQRIHTGEKP
                     YICKECGKSFHQKANLTVHQRTHTGEKPYICNECGKSFSQKTTLALHEKTHNEEKPYI
                     CSECGKSFRQKTTLVAHQRTHTGEKSYECPHCGKAFRMKSYLIDHHRTHTGEKPYECN
                     ECGKSFSQKTNLNLHQRIHTGEKPYVCNECGKSFRQKATLTVHQKIHTGQKSYECPQC
                     GKAFSRKSYLIHHQRTHTGEKPYKCSECGKCFRQKTNLIVHQRTHTGEKPYVCNECGK
                     SFSYKRNLIVHQRTHKGENIEMQ"
     exon            200..326
                     /gene="ZNF567"
                     /inference="alignment:Splign:2.1.0"
     exon            327..413
                     /gene="ZNF567"
                     /inference="alignment:Splign:2.1.0"
     exon            414..2802
                     /gene="ZNF567"
                     /inference="alignment:Splign:2.1.0"
     regulatory      2771..2776
                     /regulatory_class="polyA_signal_sequence"
                     /gene="ZNF567"
                     /note="hexamer: AATAAA"
     polyA_site      2802
                     /gene="ZNF567"
                     /note="major polyA site"
ORIGIN      
        1 agacgcccgg ccggcaaccg aaggcagtct ttagctctca tggattggga gctgggaaag
       61 gaatgagaag acagaagtca gagacaagaa gaggctaaca tgactgatac cactataatt
      121 tagtgaactg cctcttttct aaagaggact ccaaaggaag gactggtcat ctctttcata
      181 tctcaaaacc atggctcagg gatcagtgtc tttcaatgat gtgactgtgg acttcactca
      241 ggaggagtgg cagcacctgg atcatgctca gaagactcta tatatggatg tgatgttgga
      301 aaactattgc cacctcatct ctgtggggtg tcacatgacc aaacctgatg tgatcctcaa
      361 gttggaacga ggagaagagc catggacatc atttgcaggt catacctgct tggaagaaaa
      421 ctggaaagct gaagactttt tagtgaaatt caaggaacac caagagaagt attctagatc
      481 agttgtaagc atcaaccaca aaaaactggt gaaggagaag agtaaaatat atgaaaagac
      541 atttactcta ggcaaaaacc ctgtgaattc aaaaaatcta cctcctgaat atgatactca
      601 tggaaggatt ttgaaaaatg tttcagaatt aatcatcagt aatctaaatc ctgcaagaaa
      661 gagacttagt gagtataatg gatatgggaa atcactcctg agtactaaac aagagactac
      721 tcatcctgaa gtcaaatccc ataatcaaag tgccagagct ttcagtcata atgaagttct
      781 tatgcagtat cagaaaacgg aaactccagc acagtcattt ggatataatg actgtgagaa
      841 atcattcctt caaaggggag gcctgattac acatagtaga ccttacaaag gagaaaaccc
      901 atctgtatat aataaaaaaa gaagagcaac caatattgaa aaaaaacata catgcaatga
      961 atgtgggaaa tctttctgca ggaaatcagt attgattctg catcagggaa ttcactcaga
     1021 agaaaaaccc tatcaatgtc atcaatgtgg aaatgcattt agaaggaaat catatctcat
     1081 tgatcatcag agaactcaca caggagagaa accctttgtt tgcaatgaat gtggtaagtc
     1141 cttccgcctc aagacagccc tcactgatca tcagagaaca cacacagggg agaaatcgta
     1201 tgaatgtctg caatgtagga atgccttcag attgaagtca cacctcattc gtcatcagag
     1261 aactcacacg ggagagaaac catatgagtg taatgactgt gggaagtcct tccgccagaa
     1321 gacaacactc tctctacatc agagaatcca tacaggtgag aaaccctaca tttgtaaaga
     1381 atgtgggaag tcctttcacc agaaggcaaa tcttactgta catcagagaa ctcatacagg
     1441 ggaaaagccc tatatttgta atgaatgtgg gaaatccttc tcccagaaga caacccttgc
     1501 tcttcatgag aaaactcata atgaggagaa accctatatt tgtagtgaat gtggaaagtc
     1561 cttccgccag aagacaaccc ttgtagcaca tcagagaaca catacagggg agaaatctta
     1621 tgaatgtcct cactgtggga aggcctttag aatgaagtca tacctcattg atcatcaccg
     1681 aactcacaca ggagagaaac catatgaatg taatgaatgt ggtaaatcat tcagtcaaaa
     1741 gacaaatctc aatctacatc agagaattca tacaggggag aaaccctatg tttgtaatga
     1801 atgtgggaag tcctttcgcc agaaagcaac cctcactgta catcagaaaa tacataccgg
     1861 ccagaaatcc tatgaatgtc ctcagtgtgg gaaagccttt agcaggaagt catatctcat
     1921 tcatcatcaa agaactcata cgggagagaa accatataaa tgtagtgaat gtggaaagtg
     1981 cttccgccag aagacaaatc ttattgtaca tcagagaact cacacaggtg agaaacccta
     2041 tgtttgtaat gagtgtggta agtctttcag ttataagaga aacctcattg tccatcaaag
     2101 aactcacaag ggagaaaaca ttgaaatgca ataaatgatg tggtttctta tatgaattct
     2161 ttacaagctg ttgtaaacat ttagttttaa aaagaaaagc atgctgaaac atgttaatgt
     2221 aattttaaat cacaagtcta ataattatta aagtaccata cggaataact gtctactgtt
     2281 tactagcata taaaataagt atgatcatta ttattgaact ctatcagcta tgaagctaaa
     2341 ttttaaagtc aactgctctt cctactgact caaatagttt attttttaaa aatacttata
     2401 taatacatgc agagacaaga tacacaatga ttataagtat taatctccat aagagaaaat
     2461 atttatgaac tatatttctc attgcactct gtaataaaaa gcagttagtt gttacttacc
     2521 taagagttac cacttccgta gcctataaca tcaaaacgta gtttttgcat gttttcaatt
     2581 ttataaatat atattttatc agacatcatg aattattttg tgtcttgctt atttcactca
     2641 attttttaag atctgtacat tattgcatgt ggcagtagtg tattttcatt ttgcatacta
     2701 ttccatttta agaatatatt gctgtttatc ctattgatgg atatttgtat tttttatact
     2761 tttgtgtaat aataaaaata ctgctgtaaa tattcttgtt ta
//
