LOCUS       NM_001278559            7243 bp    mRNA    linear   PRI 04-APR-2024
DEFINITION  Homo sapiens zinc finger protein 316 (ZNF316), mRNA.
ACCESSION   NM_001278559 XM_003959916 XM_003959998 XM_003960375 XM_003960928
            XR_171040
VERSION     NM_001278559.2
KEYWORDS    RefSeq; MANE Select.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 7243)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC073343.6.
            
            On Nov 22, 2018 this sequence version replaced NM_001278559.1.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            RNAseq introns :: single sample supports all introns SAMEA1968540,
                              SAMEA1970526 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            inferred exon combination :: based on alignments, homology
            MANE Ensembl match        :: ENST00000382252.6/ ENSP00000477706.1
            RefSeq Select criteria    :: based on conservation, expression,
                                         longest protein
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-130               AC073343.6         22558-22687
            131-294             AC073343.6         23086-23249
            295-394             AC073343.6         24282-24381
            395-532             AC073343.6         27065-27202
            533-915             AC073343.6         27622-28004
            916-1025            AC073343.6         28204-28313
            1026-1152           AC073343.6         29062-29188
            1153-1266           AC073343.6         29720-29833
            1267-7243           AC073343.6         37543-43519
FEATURES             Location/Qualifiers
     source          1..7243
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /chromosome="7"
                     /map="7p22.1"
     gene            1..7243
                     /gene="ZNF316"
                     /gene_synonym="MZF-3"
                     /note="zinc finger protein 316"
                     /db_xref="GeneID:100131017"
                     /db_xref="HGNC:HGNC:13843"
     exon            1..130
                     /gene="ZNF316"
                     /gene_synonym="MZF-3"
                     /inference="alignment:Splign:2.1.0"
     exon            131..294
                     /gene="ZNF316"
                     /gene_synonym="MZF-3"
                     /inference="alignment:Splign:2.1.0"
     exon            295..394
                     /gene="ZNF316"
                     /gene_synonym="MZF-3"
                     /inference="alignment:Splign:2.1.0"
     exon            395..532
                     /gene="ZNF316"
                     /gene_synonym="MZF-3"
                     /inference="alignment:Splign:2.1.0"
     exon            533..915
                     /gene="ZNF316"
                     /gene_synonym="MZF-3"
                     /inference="alignment:Splign:2.1.0"
     CDS             561..3575
                     /gene="ZNF316"
                     /gene_synonym="MZF-3"
                     /codon_start=1
                     /product="zinc finger protein 316"
                     /protein_id="NP_001265488.1"
                     /db_xref="CCDS:CCDS75563.1"
                     /db_xref="GeneID:100131017"
                     /db_xref="HGNC:HGNC:13843"
                     /translation="MAALHTTPDSPAAQLERAEDGSECDPDQEEEEEEEEKGEEVQEV
                     EEEEEEIVVEEEEEGVAEVVQDAQVEAVAEVEVEADVEEEDVKEVLAEEECPALGTQE
                     RLSRGGDAKSPVLQEKGLQASRAPATPRDEDLEEEEEEEEDEDEDDLLTAGCQELVTF
                     EDVAVYFSLEEWERLEADQRGLYQEVMQENYGILVSLGYPIPKPDLIFRLEQGEEPWV
                     PDSPRPEEGDIVTGVYTGAWFWTDDIEDHEEEDDEDFLAEVAEEENEPPGLWSAAYGV
                     GDVPGTWGPDDSDSAQTPEGWGPDPGGLGVLADGSEAKPFLPGREPGANLLSPWAFPA
                     AVAPPAGRPETTCDVCGKVFPHRSRLAKHQRYHAAVKPFGCEECGKGFVYRSHLAIHQ
                     RTHTGEKPFPCPDCGKRFVYKSHLVTHRRIHTGERPYRCAFCGAGFGRRSYLVTHQRT
                     HTGERPYPCSHCGRSFSQSSALARHQAVHTADRPHCCPDCGQAFRLRADFQRHRRGGG
                     CAEAGGDGPRREPGETAAAAGPEDTDPGPEGSEVGEADGEAEAAAEEREEAAVAAPTP
                     SGKVDPAPERRFLELGNGLGEGEGPSSHPLGFHFPVHPKSWLHPDSFPILGLPDFRER
                     LPVDGRPLPAPLGGPLSLVEGTGLACDPFGGGGAAGGGGGLRAFGPAIGGLLAEPAPA
                     ALAEEESPWICSDCGKTFGRRAALAKHQRYHAGERPHRCADCGKSFVYGSHLARHRRT
                     HTGERPFPCPECGARFARGSHLAAHVRGHTGEKPFVCGVCGAGFSRRAHLTAHGRAHT
                     GERPYACGECGRRFGQSAALTRHQWAHAEEKPHRCPDCGKGFGHSSDFKRHRRTHTGE
                     KPFRCADCGRGFAQRSNLAKHRRGHTGERPFPCPECGKRFSQRSVLVTHQRTHTGERP
                     YACANCGRRFSQSSHLLTHMKTHRGATAAPGSGSAPAPAPKPEAAAKGPSSAGPGERG
                     SALLEFAGGTSFGSEHQAAFAGPSGAYREGVL"
     exon            916..1025
                     /gene="ZNF316"
                     /gene_synonym="MZF-3"
                     /inference="alignment:Splign:2.1.0"
     exon            1026..1152
                     /gene="ZNF316"
                     /gene_synonym="MZF-3"
                     /inference="alignment:Splign:2.1.0"
     exon            1153..1266
                     /gene="ZNF316"
                     /gene_synonym="MZF-3"
                     /inference="alignment:Splign:2.1.0"
     exon            1267..7243
                     /gene="ZNF316"
                     /gene_synonym="MZF-3"
                     /inference="alignment:Splign:2.1.0"
     regulatory      5375..5380
                     /regulatory_class="polyA_signal_sequence"
                     /gene="ZNF316"
                     /gene_synonym="MZF-3"
                     /note="hexamer: AATAAA"
     polyA_site      5396
                     /gene="ZNF316"
                     /gene_synonym="MZF-3"
                     /note="major polyA site"
     regulatory      7224..7229
                     /regulatory_class="polyA_signal_sequence"
                     /gene="ZNF316"
                     /gene_synonym="MZF-3"
                     /note="hexamer: AATAAA"
     polyA_site      7243
                     /gene="ZNF316"
                     /gene_synonym="MZF-3"
ORIGIN      
        1 acttccggtg cccacgcgcc gccgtcgcgc agctcccggg ccgtcacttt gtgtagcgcg
       61 gggtccgccg ccggcccgca ggccccggcc ccggtgtccg gcccgtggct cggccagccc
      121 ggcccgcgcg gtctctgcag gaggaggcgg ctccggacgc cccctggggg gcgggaggcg
      181 ctcggcccgt cgccccagga gcccgctttg tgaccttggg ggccttatcc gggctttccc
      241 tcatctgcag aaggagcccc ggtgggctgc tcggctgtct tctgctgccg gcaggagctg
      301 gtcctccacc ttctctggtc atccgtgggt ggacttcttg ggagaaagaa ctcagtgtcg
      361 tctttggagg cagagactct ccactgcttc tggggaagaa gcctgacctg ccggcttcct
      421 ggcacctgtc tctcctccta gccccgttgt gccttgcaag tgcctgcatc ctgtctgtgc
      481 tgagacctct tggcgttccc tgctggcctg gttcatgtgt gttgaggacc aggccacgtg
      541 gaggctcgct cccagggagg atggcggcgc tccacacgac tcccgactcc ccagctgccc
      601 agctggagcg ggcagaggac gggtcagagt gcgaccctga ccaggaagaa gaggaggagg
      661 aggaggaaaa gggggaagag gtgcaggagg tggaagaaga ggaggaggag atagtggtgg
      721 aggaggagga ggagggtgtg gcagaggtag tgcaggatgc gcaggtggag gcggtggccg
      781 aggtggaggt ggaggcggac gtggaggagg aggatgtgaa ggaggtgctg gcagaggagg
      841 agtgtccggc gttggggacc caggagcgac ttagccgtgg tggtgatgcc aagtccccag
      901 ttcttcagga aaagggcctg caggcctccc gggctccagc cactcctagg gatgaggacc
      961 tggaggagga ggaagaggag gaggaggatg aggacgagga tgatttgctg acggctgggt
     1021 gtcaggagct ggtgacgttt gaagatgtgg ctgtgtactt ctccctggag gagtgggaaa
     1081 ggctggaagc agaccagcgg ggcctctacc aggaagtcat gcaggagaac tatgggattc
     1141 tcgtgtcctt gggataccca attcccaagc ccgatctgat cttccggctg gaacaagggg
     1201 aagaaccttg ggtcccagat agtccccgac ctgaggaagg agacatcgtc actggcgtct
     1261 acacaggagc ctggttctgg acggacgaca tagaggacca cgaggaggaa gacgacgagg
     1321 acttcctggc ggaggtggcc gaggaggaga acgagccccc agggctctgg tcggcggcct
     1381 acggcgtggg ggacgtgcct gggacgtggg ggcccgacga ctcggattcg gcgcagactc
     1441 cagaggggtg gggacccgac ccaggcggcc tgggggtcct ggccgacggc tctgaagcga
     1501 agcctttcct gcccggccgg gagccgggtg cgaacctgct gtcgccctgg gcgttccccg
     1561 ccgcagtggc cccgccggcc gggaggccgg agaccacgtg cgacgtgtgc ggcaaggtct
     1621 tcccgcaccg ctcgcggctg gccaagcacc agcgctacca cgcggccgtc aagcccttcg
     1681 gctgcgagga gtgcggcaag ggcttcgtgt accgctcgca cttggccatc caccagcgca
     1741 cgcacaccgg cgagaagccc ttcccgtgcc cggactgcgg caagcgcttc gtctacaagt
     1801 cgcacctggt tacgcaccga cgcatccata ctggcgagcg gccctaccgc tgcgccttct
     1861 gcggcgcggg cttcgggcgc cgctcctacc tggtcacgca ccagcgcacg cacaccggcg
     1921 agcgacccta cccgtgttcg cactgcggcc gcagcttcag ccagagctcg gcgctggcac
     1981 ggcaccaggc ggtgcacacg gccgaccgcc cgcactgctg tcccgactgc ggccaggcct
     2041 tccgcctgcg cgccgacttc cagcgccacc gacgcggcgg gggctgcgcg gaggcgggtg
     2101 gtgacggccc ccggcgggag cccggcgaga cggcggccgc cgcggggccc gaggacacgg
     2161 accctgggcc agagggatct gaagttggcg aggcggacgg agaggcggag gccgcggccg
     2221 aggagagaga ggaggcggcg gtggcggcgc ccacccccag cggcaaggtg gaccccgcgc
     2281 cggaacggcg cttcctggag ctgggcaacg gcctggggga gggcgaaggc ccctcctccc
     2341 acccgctggg cttccacttc cccgtgcacc ccaagtcctg gctgcacccg gacagcttcc
     2401 cgatcctggg cctacccgac ttccgagagc ggctgccggt cgacgggcgc ccgctcccgg
     2461 cgcccctggg gggcccgctc tccctggtgg agggtaccgg gctggcgtgc gaccctttcg
     2521 gcggcggcgg ggccgcgggc ggcggaggcg gcctgcgcgc gttcgggccc gccatcgggg
     2581 gtctgctggc ggagcccgcg ccggccgcgc tggcggagga ggagagcccg tggatctgct
     2641 cggactgcgg caagacgttt gggcgccggg ccgcgctggc caagcaccag cgctaccacg
     2701 cgggcgagcg gccgcatcgc tgcgccgact gcggcaagag cttcgtgtac ggctcgcacc
     2761 tggcgcgcca ccggcgcaca cacaccggcg agcggccctt cccgtgcccc gagtgcggcg
     2821 cgcggttcgc ccgcggctcg cacttggcgg cgcacgtgcg cggccacacg ggcgagaagc
     2881 cgttcgtgtg cggcgtgtgc ggtgcggggt tcagccgtcg cgcgcacttg acggcgcacg
     2941 ggcgcgcgca caccggggag cggccttacg cgtgtggaga gtgcggccgg cgcttcgggc
     3001 agagcgcggc gctgacgcgg catcagtggg cgcacgccga ggagaagccg caccgctgcc
     3061 ccgactgcgg caagggcttc ggccacagct cggacttcaa gcggcatcgg cgcacgcaca
     3121 cgggcgagaa gcccttccgc tgcgccgact gcggccgcgg cttcgcgcag cgctccaacc
     3181 tggccaagca ccggcgcggc cacacgggcg aacgcccctt cccgtgccct gagtgcggca
     3241 agcgcttttc gcagcgctcg gtgctggtca cgcaccagcg cacacatacg ggcgagcggc
     3301 cctacgcctg cgccaactgc ggccgccgct tctcgcagag ctcgcacttg ctcacccaca
     3361 tgaagacgca ccgcggagcc accgcagcgc cgggctcggg ttcggcccca gcccccgcgc
     3421 ccaagcccga ggcggccgcc aaggggccgt ccagtgccgg ccccggtgag cgcggcagcg
     3481 ccctgctgga gttcgcgggc ggcacaagct tcggctccga gcaccaggcc gcgttcgccg
     3541 ggccctcggg cgcctaccgg gagggcgtcc tgtgaggggc ccggggccga cagcagcgca
     3601 gcctgcaggg ccaccggccc ctcccttgga cggccggccc cccgctcctc gggccccggg
     3661 aggctgaggg tcccagtcct gggtgcggtg ccttccctca gccctcgccc tgcggccccg
     3721 ggtctcatgc ccgccgggtc cgtgtgctca gccggagacg tgggggagct ctggggagaa
     3781 gagcagcgcg gaggcagcga ggccaggacg tcacccccac ggagactgcg atatcccctg
     3841 ggtgggcccg ggctgtgaag cagggcggta gttggcgggc gatgctattt atttcactcg
     3901 gattccgact tgggtggtct ggggagcaag ggatttgtgt gtttgcaacc gggtgtggcg
     3961 gcgagggagg ggcccggcca cccaggtggg ccagcgggat gcctgggagg ccggtgggtt
     4021 tggctgacca cttcttccca ttcctcagtg agagacttgg gccctcccgg tcatccgagt
     4081 ctgtcccgaa ggtttaactg cgcgcggcga ggggaggcct tgtaggtttc caaagggcgg
     4141 agctccagtg ggaaaacttg aaacttgtcg tctgcggata tttatttcca cttcttgtat
     4201 ggcctgaaga atctaggagg agaaaaagcc agataccaaa cttacggcca ggcagacggg
     4261 tcgcgggtgt tgacagggtc ctgagggagt ttgaagcctt attctcgagc cgcctcctct
     4321 tctctaccca cacttgcacc gaggtcaccc cggcaccctc cgcaccggtt cggttttggt
     4381 ctctgcttgt cctctcagtc cttggtactt tcgtctccct cagccggagg tggcaaactc
     4441 agacatctac gggcgcccga ggccctcgca gccctgagcc ccagctttca cttccctggg
     4501 ctgcccctct ccgggagcag gcagacgccc cgttctcgga gcccagcgct cacttagagc
     4561 gactgaggtt ggtcgaagga tctttcccca catcccataa tcagggccct aggacactcg
     4621 caggtccctt taactctgct tctgtcatta cactagaaca agtagtgttt ctgtttagag
     4681 tcccatttca caaattggtt agtggaggca cccgtggcct ggcagcttgc acagtggctg
     4741 tccacctcgg gggggtgtgg acctgagccg tggctcagtg acaaaccagg cacccaacta
     4801 tgcaaggccc ctgcctggtg ggcatcctac cctctggact gggcccatgg aagccactgg
     4861 gcgggcagct ggggtgtagt tcatgtgaag ccccattccc ctcacgcttt tggggccact
     4921 gtgaatgggg ccaggaaacg gatttttggt gcagctgcat tccctaatag acctagttcc
     4981 ctccacgtta gtgtagacat ggccttgggg gctgagcgca gcagccaggc tgccagggct
     5041 gggggcgggt aggaggcacg gtagttggtg ggtgggaaga gggcctgggt ggtggcggtc
     5101 agttagcctg gctgggtgag gttggtgagg ttgcggggcg gggtggtgag gagagcaggg
     5161 gtcccaggga ggcattgggg tgctgggtaa tgacctcggc cctgggtttc tcctctccct
     5221 gcgggacagg agcctcagaa agggccaagg gcaaggtggg cttggggggc tctgggaatc
     5281 tcagctctag ccctgtatgg ccaggatctg ctgtctccgt ccctcctggg ccccagcagc
     5341 tgtcctgcag ctgtcagcag gagggcctgg ctttaataaa gagtggacaa actgaacttc
     5401 tgactggact ccatgctgtc gccactcctg ggaacccgtc ggggaggctc tgcgcggcct
     5461 caggtccaac ttgtttctgc aaacattttt taaaagattt tctcttttaa gaaattagaa
     5521 tgggtcctag gatggcccat gaggagttgg ccccaggcca gtgtggcccc gtgctgccca
     5581 tgcccaccgt attccttggt ggcccccacg ctgccccaca cttgatgtag tgtaaacacc
     5641 tgacttgggg cattactttt tgtgaatatg ttggccaggc ttccagaggc cagagtgagg
     5701 ggccaggtac ccttcgtggt ggtccaaaca catccccagc cctttcttca gaggccccag
     5761 caccatgtgg ctcatccagg gctcacctac tccagtacca gggcaaggtg tacagcccca
     5821 ggacccaaaa tgcctccctt aaagctgatt ggttgatttc tttattctta tcacatggta
     5881 gcccacgatc agatctgact ctcctgtcct ttctttgtgg gtctgaaaaa taagaactgc
     5941 tgtaatcaaa tgtgatctgg aggcatcaga acagagcaat ctaatgcttc ttttcttgcc
     6001 caggctggag tgcagggcgt gatctcggct cactgcaacc tctgcctccc aggttcaagc
     6061 gattctcctg cctcagactg ccgagtagct gggattacag gcatgtgcca ccatgcccag
     6121 cgagtttttt tgtattttta gtagagatgg gatttcagca tattggccag gctggtcttg
     6181 agctcctgat cttgtgatct gcctgtcttg gccttccaaa gtgctgggat tgcaggtgtg
     6241 agtcaccgcg cccggccaga gcaacctaat atttcaaaaa aaaaaaaaaa aaaaaaaaaa
     6301 aagccgggca tagtggtatg catctgtagt cccatctact tgggaggctg aggtgggagg
     6361 atcgcctgag accagaaatt caaggccaac ctgggcaacg tatcaagact ccatgtctga
     6421 aacagacgtt tgagtggcag acaaatacaa agacctagtt aaaaaatgga gccccttgag
     6481 gatcttacag tctattcaga aaagttaaat gaggctgggt gcgatggctc atgcctgtaa
     6541 tcccagcact atgggaggcc aaggcggatc ccttgagctc agatggattc cttgagctca
     6601 ggagttcgag gccagctggg acaacacggc aaaactcttg tctctataaa aaatacaaaa
     6661 attagctggg tgtggtggcg cacgtctata gtcccagcta ctctggaggc tgagcctggg
     6721 aggcagaggc tgcagtgaac tatgattttt ccattgcact ccagcctggg tgacagaaca
     6781 agaccctatc tcaccaaaaa aaaaaaaaaa aaaaaaaaaa aggttccccg atagaactta
     6841 tagttgactg tccagccaaa tacttaaaaa aaaagtttat agggagaaaa ataccctccc
     6901 ccatccaatg gtcataggaa aaaaagtaga caccctttat tgccaaggag gaattaaacc
     6961 ctagtgactt gtgaaatgtg agtcacgaaa ggtggcactt agagggtccc tcagccctga
     7021 gcgtcacttt cccctccatc tacctttgtt atttcctttc tcttttgccg gtttccccaa
     7081 cctccttcct tttctgattc attcctttta tcctgatctt ttcacttaat ctcgtccaac
     7141 atttccttct atctcccttt tttctttctc taattggcta catatggaat aaagtatttt
     7201 gaattactgg gttatatcta ttaaataaag ctttatgatc ttt
//
