LOCUS       NM_001382360            2782 bp    mRNA    linear   PRI 16-FEB-2024
DEFINITION  Homo sapiens zinc finger protein 311 (ZNF311), transcript variant
            6, mRNA.
ACCESSION   NM_001382360
VERSION     NM_001382360.1
KEYWORDS    RefSeq; MANE Select.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 2782)
  AUTHORS   Ge,X., Jiang,S., Wang,Z., Hu,N., Jiang,R., Cai,Z., Wu,B., Zhang,Y.
            and Gong,P.
  TITLE     Prognostic Biomarker ZNF311 and Its Correlation With Tumor
            Progression and Immune Infiltrates in Glioma
  JOURNAL   World Neurosurg 151, e37-e46 (2021)
   PUBMED   33746099
  REMARK    GeneRIF: Prognostic Biomarker ZNF311 and Its Correlation With Tumor
            Progression and Immune Infiltrates in Glioma.
REFERENCE   2  (bases 1 to 2782)
  AUTHORS   Petroni,D., Bartolini,E., Chiaramonte,R., Ottolenghi,S. and Comi,P.
  TITLE     Computer sequence analysis of human highly conserved zinc finger
            modules
  JOURNAL   DNA Seq 9 (3), 163-169 (1998)
   PUBMED   10520746
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AL662791.3.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR18074969.1493779.1,
                                           SRR14038196.1805268.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA2148874 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            MANE Ensembl match     :: ENST00000377179.4/ ENSP00000366384.3
            RefSeq Select criteria :: based on manual assertion, conservation,
                                      expression
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-308               AL662791.3         39740-40047         c
            309-577             AL662791.3         38678-38946         c
            578-659             AL662791.3         38245-38326         c
            660-751             AL662791.3         34688-34779         c
            752-878             AL662791.3         34219-34345         c
            879-983             AL662791.3         33466-33570         c
            984-2782            AL662791.3         29520-31318         c
FEATURES             Location/Qualifiers
     source          1..2782
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /chromosome="6"
                     /map="6p22.1"
     gene            1..2782
                     /gene="ZNF311"
                     /gene_synonym="zf31"
                     /note="zinc finger protein 311"
                     /db_xref="GeneID:282890"
                     /db_xref="HGNC:HGNC:13847"
     exon            1..308
                     /gene="ZNF311"
                     /gene_synonym="zf31"
                     /inference="alignment:Splign:2.1.0"
     exon            309..577
                     /gene="ZNF311"
                     /gene_synonym="zf31"
                     /inference="alignment:Splign:2.1.0"
     CDS             569..2569
                     /gene="ZNF311"
                     /gene_synonym="zf31"
                     /note="isoform a is encoded by transcript variant 6; zinc
                     finger protein zfp31"
                     /codon_start=1
                     /product="zinc finger protein 311 isoform a"
                     /protein_id="NP_001369289.1"
                     /db_xref="CCDS:CCDS34357.1"
                     /db_xref="GeneID:282890"
                     /db_xref="HGNC:HGNC:13847"
                     /translation="MQEVVLLDESSGPPSQLLWTRQDTQLPQESALLPAPYPAFTKDG
                     SQGNLPQADITLMSQAQESVTFEDVAVNFTNREWQCLTYAQRHLYKDVMLENYGNMVS
                     LGFPFPKPPLISHLEREVDPCVQDPQDRESLSCSYPVSADKMWPENEKASSQQEIFEN
                     GEAYWMKFNSLLKVDSRDPKVREVCVQDVKLENQWETSIREKLREEKEGSEEVTCKKG
                     KNQKVLSKNLNPNSKHSQCNKVLIAQKLHECARCGKNFSWHSDLILHEQIHSGEKPHV
                     CNECGKAFKTRNQLSMHRIIHTGEKPFNCTQCGKAFNSRSALCRHKKTHSGEKPHECR
                     DCGKAFKTRNRLCMHQLIHTGEKPYKCNCCGKAFQFKHSLTIHGRIHTGEKPYECEEC
                     GKAFSGSSDLTKHIRIHTGERPYECSKCGRAFSRSSDLSKHKRIHTREKHYGCPQCGK
                     DFSIKAELTKHRRIHTEEKRYRCEECGKAFRHNCKRRAHEREHTGEKPYQCRDCGKTF
                     QDKHCLTIHQRIHTGEKPYKCLECGKAFSGKSNLTNHRRIHTGEKPHKCEVCGMAFHH
                     SSVLRQHKRIHTGEKPYTCSECGTSFRQGSALIGHKRVHTGEKPYECEECGKAFRVSS
                     NLTGHKKRKHQVWSTHELDGSRKSLSPVTVSQTSVVSILTSA"
     exon            578..659
                     /gene="ZNF311"
                     /gene_synonym="zf31"
                     /inference="alignment:Splign:2.1.0"
     exon            660..751
                     /gene="ZNF311"
                     /gene_synonym="zf31"
                     /inference="alignment:Splign:2.1.0"
     exon            752..878
                     /gene="ZNF311"
                     /gene_synonym="zf31"
                     /inference="alignment:Splign:2.1.0"
     exon            879..983
                     /gene="ZNF311"
                     /gene_synonym="zf31"
                     /inference="alignment:Splign:2.1.0"
     exon            984..2782
                     /gene="ZNF311"
                     /gene_synonym="zf31"
                     /inference="alignment:Splign:2.1.0"
     regulatory      2765..2770
                     /regulatory_class="polyA_signal_sequence"
                     /gene="ZNF311"
                     /gene_synonym="zf31"
                     /note="hexamer: AATAAA"
     polyA_site      2782
                     /gene="ZNF311"
                     /gene_synonym="zf31"
                     /note="major polyA site"
ORIGIN      
        1 agaccggagt cttgctcttg tcgcctcctg acccattctt tttattcttc tctacagcat
       61 ccattcatat attcattcag tcagctaatt tttaatccag cacatactat tgcaagcgct
      121 gttttaggcg ttgagaatac aactgtgaac aagacgacaa aaattcctgc cctcatggag
      181 cctaagagcc tagattttag cgaaggtaga accaccgtaa acaatgtata tattaataag
      241 taacttatgc accatactgg aaaattataa agtgctatag aggaaaagaa gaattcatgt
      301 aaagcaaggg aaacaagatg tgagatcaca gcggtttagt gttgctaatg aaccccaaat
      361 ccagggcagt gtttgacaca ttaagccaaa cagtagcggc actgtgggtc aagaagggcc
      421 ctttggctgg caccaccaaa acatgtgttc tccaaaggag gctggcatca actggagcca
      481 cttcacagct tgtttgagaa ctggatctga ccagtaggaa gaaaccagga cagcagtgga
      541 agactgttaa agaaacctga gtaaaaagat gcaggaggtt gtgctgttgg atgagagttc
      601 aggaccacca agccagctgc tttggacccg ccaggatacc cagctccctc aggaaagcgc
      661 tctattacct gctccatatc ctgccttcac taaagatgga agccaaggaa acctgccgca
      721 agcagatatc acactaatga gccaggccca agagtcagtg acatttgagg atgtagctgt
      781 gaacttcact aacagggagt ggcagtgtct gacctacgct caaaggcatc tctataagga
      841 tgtgatgttg gaaaattatg ggaacatggt atcacttgga tttccatttc ctaaacctcc
      901 tttaatctct catctggagc gagaagtaga cccctgtgtg caggatccac aggacaggga
      961 gtccctaagc tgctcctacc cagtgtcagc tgacaagatg tggcctgaga atgaaaaggc
     1021 aagttcacaa caagagattt ttgaaaatgg agaagcctac tggatgaaat ttaacagtct
     1081 cctaaaagtt gattcccggg atcctaaggt tagagaagtt tgtgttcagg atgtcaaatt
     1141 agagaatcaa tgggaaacat ctataaggga gaaactgaga gaagagaaag aaggctctga
     1201 ggaagtgacc tgcaaaaaag gaaagaacca gaaagtgctt agtaaaaact tgaatccaaa
     1261 ctcaaaacat agtcaatgta ataaagttct tatagcacag aaactccatg aatgtgccag
     1321 gtgtggcaaa aacttcagtt ggcactcaga tctaattctc catgagcaaa ttcattctgg
     1381 tgagaaaccc catgtgtgta atgagtgtgg gaaagcattc aagaccagaa atcagctttc
     1441 tatgcaccgg ataatccaca caggggagaa accttttaat tgcacccagt gtgggaaggc
     1501 tttcaacagt agatcagctc tttgccgaca taaaaaaacc cacagtgggg agaagcctca
     1561 cgagtgcagg gactgtggga aggccttcaa gaccaggaac cgtctctgta tgcatcagct
     1621 tatccacacc ggggagaagc cttacaaatg taactgctgt gggaaggcct tccagtttaa
     1681 gcattccctt accatccatg gcagaatcca cactggggag aagccatatg aatgtgagga
     1741 gtgcgggaag gccttcagtg ggagttcaga cctcaccaaa cacataagaa tccacactgg
     1801 ggaacgacct tatgagtgca gcaagtgtgg aagggccttc agtcggagct cagacctaag
     1861 caaacacaaa cgaatccata ctcgggagaa acactatggg tgtccccagt gtggaaaaga
     1921 cttcagcatc aaggcagaac tcaccaaaca cagaaggatc cacactgaag agaaacgtta
     1981 caggtgtgag gagtgtggga aagcctttcg tcataactgt aagcgcaggg ctcatgaacg
     2041 agagcataca ggggagaagc cctatcaatg cagggattgt gggaaaacct tccaagataa
     2101 gcactgcctt accatccatc agagaatcca cactggagag aaaccttaca aatgtttaga
     2161 gtgtgggaaa gctttcagtg ggaagtcaaa cttgaccaat catcgaagaa ttcacactgg
     2221 agagaagcct cacaaatgtg aggtatgtgg aatggccttc catcatagtt cagtcctgag
     2281 gcagcacaaa agaatccaca ctggtgagaa gccatacacc tgcagtgagt gtggcacgtc
     2341 cttccgtcag ggctcagctc tgattggaca taagcgagtt catactgggg agaaacctta
     2401 tgaatgtgag gaatgtggaa aagcttttag agtgagctca aatcttactg gacataagaa
     2461 aagaaaacat caagtatgga gtacccatga acttgatggg agtaggaaat ccctctctcc
     2521 agtgactgtt tctcagacct cagtagtcag tattttgacc agtgcctgag tataacgatt
     2581 ctggtgttac tttctgtttt tcctacctct taggctggtc cttctgtctc ttatattagt
     2641 tattcctgat ttcctgaccc ttaattgtga gattccccaa agacattgtc ctttaccttc
     2701 ttattcacta ttttttcagt gagcacattt acttccaaga gtttatcaat cacttcctaa
     2761 tattaataaa cacttattag tg
//
