LOCUS       NM_080660               1766 bp    mRNA    linear   PRI 16-OCT-2024
DEFINITION  Homo sapiens ZC3HAV1 like (ZC3HAV1L), mRNA.
ACCESSION   NM_080660
VERSION     NM_080660.4
KEYWORDS    RefSeq; MANE Select.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 1766)
  AUTHORS   Fang,W., Wei,Y., Kang,Y. and Landweber,L.F.
  TITLE     Detection of a common chimeric transcript between human chromosomes
            7 and 16
  JOURNAL   Biol Direct 7, 49 (2012)
   PUBMED   23273016
  REMARK    GeneRIF: Study reports the discovery of a chimeric RNA between
            ZC3HAV1L and CHMP1A in human, located on chromosome 7 and 16,
            respectively. The fusion occurs at an exon-exon boundary, and was
            detected both computationally and experimentally from different
            cells or tissue types.
            Publication Status: Online-Only
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC083868.3 and BC008842.2.
            
            On Nov 24, 2018 this sequence version replaced NM_080660.3.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC008842.2 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA2147920 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            MANE Ensembl match     :: ENST00000275766.2/ ENSP00000275766.1
            RefSeq Select criteria :: based on conservation, expression
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-13                AC083868.3         133140-133152       c
            14-756              BC008842.2         1-743
            757-757             AC083868.3         125840-125840       c
            758-1766            BC008842.2         745-1753
FEATURES             Location/Qualifiers
     source          1..1766
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /chromosome="7"
                     /map="7q34"
     gene            1..1766
                     /gene="ZC3HAV1L"
                     /gene_synonym="C7orf39"
                     /note="ZC3HAV1 like"
                     /db_xref="GeneID:92092"
                     /db_xref="HGNC:HGNC:22423"
     exon            1..390
                     /gene="ZC3HAV1L"
                     /gene_synonym="C7orf39"
                     /inference="alignment:Splign:2.1.0"
     CDS             26..928
                     /gene="ZC3HAV1L"
                     /gene_synonym="C7orf39"
                     /note="zinc finger CCCH-type, antiviral 1-like; zinc
                     finger CCCH-type containing, antiviral 1 like"
                     /codon_start=1
                     /product="zinc finger CCCH-type antiviral protein 1-like"
                     /protein_id="NP_542391.2"
                     /db_xref="CCDS:CCDS5850.1"
                     /db_xref="GeneID:92092"
                     /db_xref="HGNC:HGNC:22423"
                     /translation="MAEPTVCSFLTKVLCAHGGRMFLKDLRGHVELSEARLRDVLQRA
                     GPERFLLQEVETQEGLGDAEAEAAAGAVGGGGTSAWRVVAVSSVRLCARYQRGECQAC
                     DQLHFCRRHMLGKCPNRDCWSTCTLSHDIHTPVNMQVLKSHGLFGLNENQLRILLLQN
                     DPCLLPEVCLLYNKGEALYGYCNLKDKCNKFHVCKSFVKGECKLQTCKRSHQLIHAAS
                     LKLLQDQGLNIPSVVNFQIISTYKHMKLHKMLENTDNSSPSTEHSQGLEKQGVHAAGA
                     AEAGPLASVPAQSAKKPCPVSCEK"
     exon            391..526
                     /gene="ZC3HAV1L"
                     /gene_synonym="C7orf39"
                     /inference="alignment:Splign:2.1.0"
     exon            527..785
                     /gene="ZC3HAV1L"
                     /gene_synonym="C7orf39"
                     /inference="alignment:Splign:2.1.0"
     exon            786..911
                     /gene="ZC3HAV1L"
                     /gene_synonym="C7orf39"
                     /inference="alignment:Splign:2.1.0"
     exon            912..1766
                     /gene="ZC3HAV1L"
                     /gene_synonym="C7orf39"
                     /inference="alignment:Splign:2.1.0"
     regulatory      1744..1749
                     /regulatory_class="polyA_signal_sequence"
                     /gene="ZC3HAV1L"
                     /gene_synonym="C7orf39"
                     /note="hexamer: AATATA"
     polyA_site      1766
                     /gene="ZC3HAV1L"
                     /gene_synonym="C7orf39"
                     /note="major polyA site"
ORIGIN      
        1 gcgcacaggg cccgcgccag cgaccatggc ggagcccaca gtgtgctcct tcctcaccaa
       61 ggtgctgtgc gcccacggcg gccgcatgtt cctgaaggac ctgcgcggcc acgtggagct
      121 gtcggaggcc aggctccggg acgtgctgca gcgcgccggg cccgagcgtt tcctgctgca
      181 ggaggtggag acgcaggagg gcctcgggga cgcggaggcc gaggcggcgg ccggcgcggt
      241 gggcggtggc ggcacctccg cctggagggt ggtggccgtg tcctctgtgc gcctctgcgc
      301 ccgctaccag cgcggcgagt gccaggcctg cgaccagctg cacttctgcc gccggcacat
      361 gctgggcaag tgccccaacc gggactgctg gtctacctgt accctttccc atgatatcca
      421 cacacctgtc aacatgcagg tcctgaaaag ccatggactt tttggtctca atgaaaacca
      481 gcttcggatc ctgcttttgc agaatgaccc ctgtctttta ccagaggtct gtttgctcta
      541 caacaaaggg gaagccctgt atggctactg caacctcaag gataaatgca acaagtttca
      601 tgtgtgcaaa tcctttgtga aaggagaatg caaacttcag acctgcaaac ggtcccatca
      661 gcttatccat gctgcatctt tgaagctgct acaggaccaa ggactgaata ttccaagtgt
      721 tgttaatttt cagataatct ccacctacaa gcatatgaag ctgcacaaga tgcttgaaaa
      781 tacagataat tcatcacctt cgactgagca ttcacaaggc cttgagaagc aaggagtgca
      841 cgcagctgga gctgcagaag ctggtcctct ggcttctgtc cctgctcagt cggccaagaa
      901 gccctgccca gtgtcttgcg agaagtaaag aagatggaaa aggagaaaat gtccttttgg
      961 aagaatacat ttgggcatgg gtggttgggg atggggtggg acattgaaca ggcaaagaga
     1021 ggctaaaatt gagtgcagat ggggctagtc cagggcaagt gctgaagatg gcagctgcta
     1081 tctgcagctc ctaggtgctt tcctcaggct gggtagatgg agctctgctg acttctgtgg
     1141 tccaccattg tttttctatc aatttatatt gtggcaatcc tagagtactt tgcactcatt
     1201 tttttttttc acttaatatt gtctcataag catctttcta tatttgttca catcgtacat
     1261 aatcatgttt ttgcacagat acattaatat tatcatagtt tgtttaacta cttggctttt
     1321 tctaacagtt tttttttttg agatggtctt gctctgttgc ccaggctgga gtgcagtgac
     1381 gtgatctcgg ctcactgcag ccttgacttc ctgggctcaa gtgatcatcc cacctcagcc
     1441 tcctgagtag ctgggactac aggtatgcac cacgaccagc taattttttg tatttttttt
     1501 ttgtagagag ggtattttgc catgttgccc aggctagtct tgaactcctg ggctcaagcg
     1561 atctgcctgc ttcagcctcc cagagtgcta ggattacagg catgagccac tgcacccagc
     1621 ctcttaacaa attttgaata taactcctgt cttaaaatct gcagaatatt gaatttttcc
     1681 agctattttt tacttttgct tagcttatag atgctaaagg atactgtcat ttgcattttt
     1741 aaaaatatat gtatgagtga atagtt
//
