LOCUS       NM_001013623             951 bp    mRNA    linear   PRI 04-APR-2024
DEFINITION  Homo sapiens zinc finger C2HC-type containing 1B (ZC2HC1B), mRNA.
ACCESSION   NM_001013623 XM_087800
VERSION     NM_001013623.3
KEYWORDS    RefSeq; MANE Select.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 951)
  AUTHORS   Luck,K., Kim,D.K., Lambourne,L., Spirohn,K., Begg,B.E., Bian,W.,
            Brignall,R., Cafarelli,T., Campos-Laborie,F.J., Charloteaux,B.,
            Choi,D., Cote,A.G., Daley,M., Deimling,S., Desbuleux,A., Dricot,A.,
            Gebbia,M., Hardy,M.F., Kishore,N., Knapp,J.J., Kovacs,I.A.,
            Lemmens,I., Mee,M.W., Mellor,J.C., Pollis,C., Pons,C.,
            Richardson,A.D., Schlabach,S., Teeking,B., Yadav,A., Babor,M.,
            Balcha,D., Basha,O., Bowman-Colin,C., Chin,S.F., Choi,S.G.,
            Colabella,C., Coppin,G., D'Amata,C., De Ridder,D., De Rouck,S.,
            Duran-Frigola,M., Ennajdaoui,H., Goebels,F., Goehring,L., Gopal,A.,
            Haddad,G., Hatchi,E., Helmy,M., Jacob,Y., Kassa,Y., Landini,S.,
            Li,R., van Lieshout,N., MacWilliams,A., Markey,D., Paulson,J.N.,
            Rangarajan,S., Rasla,J., Rayhan,A., Rolland,T., San-Miguel,A.,
            Shen,Y., Sheykhkarimli,D., Sheynkman,G.M., Simonovsky,E., Tasan,M.,
            Tejeda,A., Tropepe,V., Twizere,J.C., Wang,Y., Weatheritt,R.J.,
            Weile,J., Xia,Y., Yang,X., Yeger-Lotem,E., Zhong,Q., Aloy,P.,
            Bader,G.D., De Las Rivas,J., Gaudet,S., Hao,T., Rak,J.,
            Tavernier,J., Hill,D.E., Vidal,M., Roth,F.P. and Calderwood,M.A.
  TITLE     A reference map of the human binary protein interactome
  JOURNAL   Nature 580 (7803), 402-408 (2020)
   PUBMED   32296183
REFERENCE   2  (bases 1 to 951)
  AUTHORS   Mungall,A.J., Palmer,S.A., Sims,S.K., Edwards,C.A., Ashurst,J.L.,
            Wilming,L., Jones,M.C., Horton,R., Hunt,S.E., Scott,C.E.,
            Gilbert,J.G., Clamp,M.E., Bethel,G., Milne,S., Ainscough,R.,
            Almeida,J.P., Ambrose,K.D., Andrews,T.D., Ashwell,R.I.,
            Babbage,A.K., Bagguley,C.L., Bailey,J., Banerjee,R., Barker,D.J.,
            Barlow,K.F., Bates,K., Beare,D.M., Beasley,H., Beasley,O.,
            Bird,C.P., Blakey,S., Bray-Allen,S., Brook,J., Brown,A.J.,
            Brown,J.Y., Burford,D.C., Burrill,W., Burton,J., Carder,C.,
            Carter,N.P., Chapman,J.C., Clark,S.Y., Clark,G., Clee,C.M.,
            Clegg,S., Cobley,V., Collier,R.E., Collins,J.E., Colman,L.K.,
            Corby,N.R., Coville,G.J., Culley,K.M., Dhami,P., Davies,J.,
            Dunn,M., Earthrowl,M.E., Ellington,A.E., Evans,K.A., Faulkner,L.,
            Francis,M.D., Frankish,A., Frankland,J., French,L., Garner,P.,
            Garnett,J., Ghori,M.J., Gilby,L.M., Gillson,C.J., Glithero,R.J.,
            Grafham,D.V., Grant,M., Gribble,S., Griffiths,C., Griffiths,M.,
            Hall,R., Halls,K.S., Hammond,S., Harley,J.L., Hart,E.A.,
            Heath,P.D., Heathcott,R., Holmes,S.J., Howden,P.J., Howe,K.L.,
            Howell,G.R., Huckle,E., Humphray,S.J., Humphries,M.D., Hunt,A.R.,
            Johnson,C.M., Joy,A.A., Kay,M., Keenan,S.J., Kimberley,A.M.,
            King,A., Laird,G.K., Langford,C., Lawlor,S., Leongamornlert,D.A.,
            Leversha,M., Lloyd,C.R., Lloyd,D.M., Loveland,J.E., Lovell,J.,
            Martin,S., Mashreghi-Mohammadi,M., Maslen,G.L., Matthews,L.,
            McCann,O.T., McLaren,S.J., McLay,K., McMurray,A., Moore,M.J.,
            Mullikin,J.C., Niblett,D., Nickerson,T., Novik,K.L., Oliver,K.,
            Overton-Larty,E.K., Parker,A., Patel,R., Pearce,A.V., Peck,A.I.,
            Phillimore,B., Phillips,S., Plumb,R.W., Porter,K.M., Ramsey,Y.,
            Ranby,S.A., Rice,C.M., Ross,M.T., Searle,S.M., Sehra,H.K.,
            Sheridan,E., Skuce,C.D., Smith,S., Smith,M., Spraggon,L.,
            Squares,S.L., Steward,C.A., Sycamore,N., Tamlyn-Hall,G., Tester,J.,
            Theaker,A.J., Thomas,D.W., Thorpe,A., Tracey,A., Tromans,A.,
            Tubby,B., Wall,M., Wallis,J.M., West,A.P., White,S.S.,
            Whitehead,S.L., Whittaker,H., Wild,A., Willey,D.J., Wilmer,T.E.,
            Wood,J.M., Wray,P.W., Wyatt,J.C., Young,L., Younger,R.M.,
            Bentley,D.R., Coulson,A., Durbin,R., Hubbard,T., Sulston,J.E.,
            Dunham,I., Rogers,J. and Beck,S.
  TITLE     The DNA sequence and analysis of human chromosome 6
  JOURNAL   Nature 425 (6960), 805-811 (2003)
   PUBMED   14574404
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            BC146950.1 and DB515645.1.
            
            On May 17, 2019 this sequence version replaced NM_001013623.2.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR5189667.141648.1,
                                           SRR5189667.14277.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA1968968, SAMEA2148093
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            MANE Ensembl match     :: ENST00000237275.9/ ENSP00000237275.6
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-809               BC146950.1         39-847
            810-951             DB515645.1         270-411
FEATURES             Location/Qualifiers
     source          1..951
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /chromosome="6"
                     /map="6q24.2"
     gene            1..951
                     /gene="ZC2HC1B"
                     /gene_synonym="C6orf94; dJ468K18.5; FAM164B"
                     /note="zinc finger C2HC-type containing 1B"
                     /db_xref="GeneID:153918"
                     /db_xref="HGNC:HGNC:21174"
     exon            1..94
                     /gene="ZC2HC1B"
                     /gene_synonym="C6orf94; dJ468K18.5; FAM164B"
                     /inference="alignment:Splign:2.1.0"
     CDS             67..735
                     /gene="ZC2HC1B"
                     /gene_synonym="C6orf94; dJ468K18.5; FAM164B"
                     /note="family with sequence similarity 164, member B;
                     protein FAM164B"
                     /codon_start=1
                     /product="zinc finger C2HC domain-containing protein 1B"
                     /protein_id="NP_001013645.1"
                     /db_xref="CCDS:CCDS47495.1"
                     /db_xref="GeneID:153918"
                     /db_xref="HGNC:HGNC:21174"
                     /translation="MAGAEPFLADGNQELFPCEVCGRRFAADVLERHGPICKKLFNRK
                     RKPFSSLKQRLQGTDIPTVKKTPQSKSPPVRKSNWRQQHEDFINAIRSAKQCMLAIKE
                     GRPLPPPPPPSLNPDYIQRPYCMRRFNESAAERHTNFCKDQSSRRVFNPAQTAAKLAS
                     RAQGRAQMGPKKEPTVTSAVGALLQNRVLVATNEVPTKSGLAMDPASGAKLRQGFSKS
                     SKKD"
     exon            95..156
                     /gene="ZC2HC1B"
                     /gene_synonym="C6orf94; dJ468K18.5; FAM164B"
                     /inference="alignment:Splign:2.1.0"
     exon            157..276
                     /gene="ZC2HC1B"
                     /gene_synonym="C6orf94; dJ468K18.5; FAM164B"
                     /inference="alignment:Splign:2.1.0"
     exon            277..415
                     /gene="ZC2HC1B"
                     /gene_synonym="C6orf94; dJ468K18.5; FAM164B"
                     /inference="alignment:Splign:2.1.0"
     exon            416..555
                     /gene="ZC2HC1B"
                     /gene_synonym="C6orf94; dJ468K18.5; FAM164B"
                     /inference="alignment:Splign:2.1.0"
     exon            556..664
                     /gene="ZC2HC1B"
                     /gene_synonym="C6orf94; dJ468K18.5; FAM164B"
                     /inference="alignment:Splign:2.1.0"
     exon            665..749
                     /gene="ZC2HC1B"
                     /gene_synonym="C6orf94; dJ468K18.5; FAM164B"
                     /inference="alignment:Splign:2.1.0"
     exon            750..951
                     /gene="ZC2HC1B"
                     /gene_synonym="C6orf94; dJ468K18.5; FAM164B"
                     /inference="alignment:Splign:2.1.0"
     regulatory      932..937
                     /regulatory_class="polyA_signal_sequence"
                     /gene="ZC2HC1B"
                     /gene_synonym="C6orf94; dJ468K18.5; FAM164B"
                     /note="hexamer: ATTAAA"
     polyA_site      951
                     /gene="ZC2HC1B"
                     /gene_synonym="C6orf94; dJ468K18.5; FAM164B"
                     /note="major polyA site"
ORIGIN      
        1 agtatgatgt tatctggact gggctgtaaa aatctgtgaa cactgttgct ctgagttagg
       61 aacagaatgg ctggggcaga accatttttg gcagatggca atcaggaatt gtttccctgt
      121 gaagtctgtg gaagacgttt tgcagcagat gttctggaaa ggcatggacc aatatgtaag
      181 aaactcttca acagaaagcg taaacctttc agttctttga agcaaagatt acagggcact
      241 gacattccta ctgtgaagaa gactccacaa tccaagtctc cacctgtgag gaagtctaac
      301 tggagacaac aacatgaaga ctttattaat gcaatccgat cagcaaagca gtgtatgcta
      361 gccattaaag aaggccgacc cctcccacct ccaccccctc catccttgaa cccagattat
      421 attcaacgtc catattgtat gagaaggttt aatgaaagcg cagctgagcg acatactaat
      481 ttctgcaagg atcagtcttc tcgccgagtc tttaatccag ctcagacagc agccaaattg
      541 gcatccagag ctcagggtag ggctcagatg ggtccaaaaa aagaaccaac tgttaccagt
      601 gctgtgggag ctttgctgca gaacagggtc ctggtggcca cgaatgaagt cccaaccaag
      661 tcaggattag ctatggaccc tgcttctgga gcaaaactca gacaaggatt tagtaaatct
      721 tctaaaaaag attaactcct agaagccaga ctgcctccct gaaacccatc agcctggatg
      781 gttgcgtacc cgagaatgcc acctaagggg aaggaacggt agatgtgatg tctgttttta
      841 cacccttgat tcttcttgaa gcatcactta gaacaagtaa aacttgcttc agatttttat
      901 ttactccctt tgaagttttc aaaacaaaag cattaaacac atcaacctgt a
//
