LOCUS       NM_014830               6268 bp    mRNA    linear   PRI 05-APR-2024
DEFINITION  Homo sapiens zinc finger and BTB domain containing 39 (ZBTB39),
            mRNA.
ACCESSION   NM_014830 XM_374985
VERSION     NM_014830.3
KEYWORDS    RefSeq; MANE Select.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 6268)
  AUTHORS   Luck,K., Kim,D.K., Lambourne,L., Spirohn,K., Begg,B.E., Bian,W.,
            Brignall,R., Cafarelli,T., Campos-Laborie,F.J., Charloteaux,B.,
            Choi,D., Cote,A.G., Daley,M., Deimling,S., Desbuleux,A., Dricot,A.,
            Gebbia,M., Hardy,M.F., Kishore,N., Knapp,J.J., Kovacs,I.A.,
            Lemmens,I., Mee,M.W., Mellor,J.C., Pollis,C., Pons,C.,
            Richardson,A.D., Schlabach,S., Teeking,B., Yadav,A., Babor,M.,
            Balcha,D., Basha,O., Bowman-Colin,C., Chin,S.F., Choi,S.G.,
            Colabella,C., Coppin,G., D'Amata,C., De Ridder,D., De Rouck,S.,
            Duran-Frigola,M., Ennajdaoui,H., Goebels,F., Goehring,L., Gopal,A.,
            Haddad,G., Hatchi,E., Helmy,M., Jacob,Y., Kassa,Y., Landini,S.,
            Li,R., van Lieshout,N., MacWilliams,A., Markey,D., Paulson,J.N.,
            Rangarajan,S., Rasla,J., Rayhan,A., Rolland,T., San-Miguel,A.,
            Shen,Y., Sheykhkarimli,D., Sheynkman,G.M., Simonovsky,E., Tasan,M.,
            Tejeda,A., Tropepe,V., Twizere,J.C., Wang,Y., Weatheritt,R.J.,
            Weile,J., Xia,Y., Yang,X., Yeger-Lotem,E., Zhong,Q., Aloy,P.,
            Bader,G.D., De Las Rivas,J., Gaudet,S., Hao,T., Rak,J.,
            Tavernier,J., Hill,D.E., Vidal,M., Roth,F.P. and Calderwood,M.A.
  TITLE     A reference map of the human binary protein interactome
  JOURNAL   Nature 580 (7803), 402-408 (2020)
   PUBMED   32296183
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC026120.33, AK292468.1 and BC152461.1.
            
            On Nov 22, 2018 this sequence version replaced NM_014830.2.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR1660805.88238.1,
                                           SRR1660805.154259.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA2151119, SAMN03267765
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            MANE Ensembl match     :: ENST00000300101.3/ ENSP00000300101.2
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-33                AC026120.33        108417-108449       c
            34-2726             AK292468.1         1-2693
            2727-4252           BC152461.1         2627-4152
            4253-4253           AC026120.33        102754-102754       c
            4254-6268           BC152461.1         4154-6168
FEATURES             Location/Qualifiers
     source          1..6268
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /chromosome="12"
                     /map="12q13.3"
     gene            1..6268
                     /gene="ZBTB39"
                     /gene_synonym="ZNF922"
                     /note="zinc finger and BTB domain containing 39"
                     /db_xref="GeneID:9880"
                     /db_xref="HGNC:HGNC:29014"
                     /db_xref="MIM:619384"
     exon            1..142
                     /gene="ZBTB39"
                     /gene_synonym="ZNF922"
                     /inference="alignment:Splign:2.1.0"
     exon            143..6268
                     /gene="ZBTB39"
                     /gene_synonym="ZNF922"
                     /inference="alignment:Splign:2.1.0"
     CDS             187..2325
                     /gene="ZBTB39"
                     /gene_synonym="ZNF922"
                     /codon_start=1
                     /product="zinc finger and BTB domain-containing protein
                     39"
                     /protein_id="NP_055645.1"
                     /db_xref="CCDS:CCDS31839.1"
                     /db_xref="GeneID:9880"
                     /db_xref="HGNC:HGNC:29014"
                     /db_xref="MIM:619384"
                     /translation="MGMRIKLQSTNHPNNLLKELNKCRLSETMCDVTIVVGSRSFPAH
                     KAVLACAAGYFQNLFLNTGLDAARTYVVDFITPANFEKVLSFVYTSELFTDLINVGVI
                     YEVAERLGMEDLLQACHSTFPDLESTARAKPLTSTSESHSGTLSCPSAEPAHPLGELR
                     GGGDYLGADRNYVLPSDAGGSYKEEEKNVASDANHSLHLPQPPPPPPKTEDHDTPAPF
                     TSIPSMMTQPLLGTVSTGIQTSTSSCQPYKVQSNGDFSKNSFLTPDNAVDITTGTNSC
                     LSNSEHSKDPGFGQMDELQLEDLGDDDLQFEDPAEDIGTTEEVIELSDDSEDELAFGE
                     NDNRENKAMPCQVCKKVLEPNIQLIRQHARDHVDLLTGNCKVCETHFQDRNSRVTHVL
                     SHIGIFLFSCDMCETKFFTQWQLTLHRRDGIFENNIIVHPNDPLPGKLGLFSGAASPE
                     LKCAACGKVLAKDFHVVRGHILDHLNLKGQACSVCDQRHLNLCSLMWHTLSHLGISVF
                     SCSVCANSFVDWHLLEKHMAVHQSLEDALFHCRLCSQSFKSEAAYRYHVSQHKCNSGL
                     DARPGFGLQHPALQKRKLPAEEFLGEELALQGQPGNSKYSCKVCGKRFAHTSEFNYHR
                     RIHTGEKPYQCKVCHKFFRGRSTIKCHLKTHSGALMYRCTVCGHYSSTLNLMSKHVGV
                     HKGSLPPDFTIEQTFMYIIHSKEADKNPDS"
     regulatory      6248..6253
                     /regulatory_class="polyA_signal_sequence"
                     /gene="ZBTB39"
                     /gene_synonym="ZNF922"
                     /note="hexamer: AATAAA"
     polyA_site      6268
                     /gene="ZBTB39"
                     /gene_synonym="ZNF922"
                     /note="major polyA site"
ORIGIN      
        1 gggccgtcgc ggcgagccgc gcggcggatg gagagtctgg ccgcggccgg cggcgccgcc
       61 tcctcgtcgg gccgggcacg gcgggccggg gcctttgtgt gaagcggcgg cggcgatggt
      121 gctcggggcg ccgcagagcc ggattaactg tgctgataag gaggtaattt cataggagct
      181 gctaagatgg gcatgaggat caaactgcaa agcaccaacc accccaacaa cctgctgaag
      241 gaactcaaca agtgccggct ctcagagacc atgtgcgacg tcaccattgt ggtggggagc
      301 cgctccttcc cggcccacaa ggctgtgctg gcctgtgcag ctggctactt ccagaacctc
      361 ttcctgaata ctgggcttga tgctgccagg acctatgtgg tggacttcat cacccctgcc
      421 aactttgaga aggttctgag ctttgtctac acttcagaac tcttcacaga cctgatcaat
      481 gttggggtca tctacgaggt agctgagcgt ctgggtatgg aggacctcct ccaggcctgt
      541 cactctacct ttcctgatct ggagagcact gccagggcca agcccctgac cagcaccagt
      601 gagagccact ctggtaccct gagttgtcct tcggcagaac ctgcccatcc ccttggagaa
      661 ctccgaggtg gtggggacta ccttggtgct gatagaaact atgtgttgcc cagtgatgct
      721 ggagggagct ataaagagga agagaagaat gttgccagtg acgctaacca tagcctgcat
      781 ctgccgcaac cgcccccacc accgccaaag acagaagacc atgacacccc tgctcccttc
      841 acgtccattc ctagcatgat gacccagcca ctcctaggca ctgtcagcac gggcatccag
      901 accagcacga gctcctgcca gccatacaaa gttcaaagca atggagactt cagtaaaaac
      961 agcttcctca cccctgacaa tgcagtagac attaccactg ggaccaactc ctgtctgagc
     1021 aatagtgagc actccaaaga tcctggcttt gggcagatgg atgagctcca gctcgaggac
     1081 ctgggggatg atgacttgca gtttgaagac cctgctgagg atataggcac aactgaggag
     1141 gtgattgagc tgagtgatga cagtgaggat gagttggctt ttggagagaa tgacaatcgg
     1201 gagaataagg ccatgccctg ccaggtgtgc aagaaagttc tagagcccaa cattcaactg
     1261 atccggcagc atgctcggga ccatgtggac ctgctgacgg gcaactgcaa ggtctgcgag
     1321 acccacttcc aggaccgaaa ctcccgggta actcatgtcc tgtcccacat tggtattttc
     1381 cttttctcct gcgacatgtg tgaaactaag ttctttaccc agtggcagct gacccttcac
     1441 cgacgggatg gaatatttga gaacaacatc attgtccacc ccaacgatcc cctgccaggg
     1501 aagctgggtc tcttttcagg ggcagcctcc ccagagctga aatgcgctgc ctgtgggaaa
     1561 gtattggcca aagatttcca tgtggtccgg ggccacatcc ttgaccatct aaacttgaag
     1621 ggccaggcct gcagtgtctg cgaccagcgt caccttaacc tctgcagcct catgtggcac
     1681 acgctgtccc atctcggcat ctcagtcttc tcctgttctg tctgtgcgaa cagctttgtg
     1741 gactggcatc ttctagagaa gcacatggct gtgcaccaaa gtctggaaga cgccctcttc
     1801 cactgccgct tgtgcagcca gagcttcaag tcagaggctg cctatcgcta ccacgtcagc
     1861 cagcacaaat gcaacagtgg ccttgatgca cggcctggtt ttgggctgca gcacccagct
     1921 ctccagaagc ggaagctgcc agcagaggag tttctgggtg aagagctggc gctgcagggc
     1981 caacctggga acagcaagta tagctgcaag gtctgtggca aaagatttgc ccacacaagc
     2041 gaattcaact accaccggcg gatccacacg ggggagaagc cataccaatg taaggtgtgc
     2101 cacaagttct ttcgaggccg ctcgaccatc aagtgccacc taaagacaca ctcgggggcc
     2161 ctcatgtacc gctgcacagt ctgtgggcac tacagttcca cccttaacct catgagcaaa
     2221 catgttggtg tgcacaaagg cagcctcccc cctgacttca ccatcgagca gaccttcatg
     2281 tacatcatcc attccaaaga ggcggataag aacccggaca gttgactggg tcccggcaga
     2341 gccacgggga gctcccaagc agcagccagg atgctgatat ctaagaggtg ttggtccctc
     2401 cccagctgaa gttataattt tgccttggta ggaattctgt tctgtgttgt gtttaaagaa
     2461 gaaaagaaga agaaatagca cataagctgt tactgttgtt gagaagcaac agccctatca
     2521 catttacctc catacctgtt cttgcccatg cagggctatg tttttcattc ttttgaggct
     2581 ggttttggga tctagtcaag cagttggtgt ccactagacc cccttcccca gcctctctag
     2641 ttttagttta ctgataggtt ttatgctgct aagaatccaa ccaacagcct cacttaacag
     2701 aggaggtaaa gggaggtttt cactgtgggt gttactgcag gcctccaact gggatgacca
     2761 gcaatgagaa agattttggg aatgtgatca ttcagaaaag acaggtcagc agggcagtcc
     2821 cctcaggttc cagccctcag cagggacaag acatcaggga tgttggtgtc tgcttatcta
     2881 cagccctaat ctgctgattg aacagtgaaa atcttttggc agctagatcc atactaggca
     2941 cagagctttc tatttaggtc agaaagcttt gggatgaacc cctgccagcc agaaggggtg
     3001 tcctgcagtg ccaccagaag tggcagcctg gatggacagg agaggtttct cttttctcct
     3061 catttccaaa gaaacaggat tttatggagt gatggcccgg gacgtccggc cttctgtggg
     3121 gcagagagga tagggaacca ctttgatata gtcatctgtt ttggccactt ctgttggcca
     3181 tgagtgtctt ggtggagagg tggggatgta tctgacagca gcagccttgc cttaatttat
     3241 atctggtctc ccgtccagaa gtgtttggcc cgtggtgtag atgagctgac tccatgaagt
     3301 ggtggagtgg cagaccgcga gcccttcagg attaaaggga cctgagtaac tggtggtgtg
     3361 tagcagggtg tgcgttctga ctgtctgtcc tagtcgggta acctgtttac tttgtgctaa
     3421 cagtgccgga gctttgtcag ctcacctttg acctgctgga atttatcctg atctgtcgtt
     3481 gccatcacct ccagggggcg ctattggatg gcagctggtt caggccctcc gtgggtggct
     3541 gcagagtgtg ccggcacagc ccacgcagct ggttagctcc actcttactt ggttttctaa
     3601 ggggctttgc ccaaagaagt cttgagggat agggccctcg atcttgcata cttgtgaggt
     3661 gccacctcag tagctcatac tacctcaccc tgctcaggtg agctctggga gtccctggcc
     3721 tcagccctgg cactgcccct ggtgggattc agcaacaccc cgggctgttt cacaagcaag
     3781 tggttttcat taactcacaa agcctttttg gacattaata tttatttatt tttgtttttg
     3841 tatacacatt acccagcatc tcttttgtat aagagacttt aggaaaatga gtttctcccc
     3901 agcaagtagc catattccag agaacagcct tgaccagaga tgtggagaac caggggtata
     3961 actaagggaa gacatgtcaa gcccttaagc aaattcttct tctccagatt gtctctagca
     4021 taataaaccc agggaacact ttaggccatg ggtgtatgtt ctataaagtt cgggacagtt
     4081 aaattccagg cctttcatcc cccttccttc ctgtgatgga gtagattggg gacagggttg
     4141 aggggaacaa gtgacatgaa tgacctattt gcacagtttg gaagcctcct gtctttattt
     4201 atattgagat gtcagacaaa ccaaagctcc atccttgttg gacctgctgc ttctccccag
     4261 ccctgaactg ataaagcctc agagttggag tgcctggctc tctggtgggg tgaccattag
     4321 atgaagggac ttgtacagtg gccagtttaa aggtccacct ttgaccatct aaacccacct
     4381 tgttcagtgt cctctgagga catcctcatc aggaaagcag tgttgagact cttcattgct
     4441 gactggcttc tccctttctt actcacactg accattagaa tttaagaagg aaatgtgtaa
     4501 cagactacag tcaagtgtct gctacatttt caagcatgag caatccctcc cagactgttg
     4561 gtgaggactg atttttgaaa tgctggtgtg agagaggtgg taattacagg aaccagccga
     4621 gtggctgaga gcagataaat gtgctggaga aacctttttc cttaacagag ggcatcatgg
     4681 atgctgggtg gtctgtgtac ttaacctgaa actgtgaagt tttccctttt tgccagtaaa
     4741 ccaaaaagca gatccttgaa acttggccct tgaaacacga aacagaaaac tgcatcccct
     4801 gatcccccgg gggctgatca gattgatcag ggtggctcag ttggtcccag tcagatacgt
     4861 cataggatca gtagctcatg agatttgttg accaaaccct ctccctgttg gtgacccctg
     4921 tattcacacc tgaacttccc gtttcccccc accccaccaa agtcatgtct gcttcctctg
     4981 cctccagctc accctcttct gaatggtttt gcttgaaaca ctatattgtg gcagagggca
     5041 ccctgggata cctggtagaa ggtattcatt ttattttgca tttttaattg ttttgacttt
     5101 ctgttcattt gattttgttg ctccctctct cctggaacct agtttactac tctcttctgt
     5161 gttactctga agttctgttt aagccttgaa catcctcttc tcccattttc ttggtatgta
     5221 ctcaggacca gctacatcat ttgtggagcc ctcttattca taaattatta aaaatttcaa
     5281 ggtggtggtc atagagcatt aaaccaaata tgaggccatt cccaacttgt tttccgaggg
     5341 gaaaatggta atacttgtgt ggcacccggg gttaaacagc agaggctcca tgtggccaga
     5401 ggcagagatt agtatcctgg cactccagtg acccactggg tgactcactg atgccacagc
     5461 acccgctagg aagctctgct gaaccttagt atttggtcct aaattttatg actccatgga
     5521 gttcccgtag tccatggcta gttaggaaga aaggaggtgg gataagggtc aggcccaggt
     5581 gacccctaag aaccaggaga tgggtaaaag ttttttttta tattctgctt ttctgatctg
     5641 tgagtacctg tttgtctcca ggccaaacct ttgggcttaa atatcttttt cctagacagg
     5701 tttttgctag tgttgaattt tcttcttcct ctggcctcct tctgtgcccc tttccccaag
     5761 cccaagactg cttaacttcc aaagcaaatt ctagatagac actgtattta ttggtatggg
     5821 agtgggctct atggggtggt ctgcacccat ctgggactct tttccctaaa tcctgcacca
     5881 aatgagtcag gaggcagggt gcacagcatt agtttcaatg tggttatgca tcataagctt
     5941 aacatcagaa tgaaaatgaa actcgatttt gatgtttctt taaaaccctt cccctgtcca
     6001 atccactcgc cgcccccacc ttgaatagct aaagtctctt atgaaacaga gaagagttgt
     6061 tgacgtctaa ctccttccat taaattaata agtactgacc tcctaatatt taagtgttta
     6121 ctatctattg ctgtaaagtt ttgtatattt tgtaaacttt tttccccaaa tagtagatgt
     6181 ctaaaatcat tgtacatctg attcttttat attccattgt tcagcacaaa gtgtggtttt
     6241 tatttagaat aaaaaaagaa atttgaaa
//
