LOCUS       XM_017011841           10169 bp    mRNA    linear   PRI 25-AUG-2024
DEFINITION  PREDICTED: Homo sapiens V-set and transmembrane domain containing
            2A (VSTM2A), transcript variant X1, mRNA.
ACCESSION   XM_017011841
VERSION     XM_017011841.2
DBLINK      BioProject: PRJNA168
KEYWORDS    RefSeq.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000007.14) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 5, 2022 this sequence version replaced XM_017011841.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001405.40-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/23/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10169
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /chromosome="7"
     gene            1..10169
                     /gene="VSTM2A"
                     /gene_synonym="VSTM2"
                     /note="V-set and transmembrane domain containing 2A;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 5 ESTs, 72 long SRA reads, and 95% coverage
                     of the annotated genomic feature by RNAseq alignments,
                     including 5 samples with support for all annotated
                     introns"
                     /db_xref="GeneID:222008"
                     /db_xref="HGNC:HGNC:28499"
     CDS             357..1388
                     /gene="VSTM2A"
                     /gene_synonym="VSTM2"
                     /codon_start=1
                     /product="V-set and transmembrane domain-containing
                     protein 2A isoform X1"
                     /protein_id="XP_016867330.1"
                     /db_xref="GeneID:222008"
                     /db_xref="HGNC:HGNC:28499"
                     /translation="MMGIFLVYVGFVFFSVLYVQQGLSSQAKFTEFPRNVTATEGQNV
                     EMSCAFQSGSASVYLEIQWWFLRGPEDLDPGAEGAGAQVELLPDRDPDSDGTKISTVK
                     VQGNDISHKLQISKVRKKDEGLYECRVTDANYGELQEHKAQAYLKVNANSHARRMQAF
                     EASPMWLQDMKPRKNVSAAIPSSIHGSANQRTHSTSSPQVVAKIPKQSPQSVSPILPE
                     VKHLHRPPLLVLPFFSLSSLFSTDPLPTFPTSHRTVKRLPAPLPQPGHGSTPGVQSCV
                     LAPPGKLPRSLALPKLSCKSLVSPASNSPPSHISSFPVSRQPFSLDHSFLTLLPLFSL
                     QAGHLFTGS"
     polyA_site      10169
                     /gene="VSTM2A"
                     /gene_synonym="VSTM2"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 acttcccgag ccggctccgt gtttagggag ggcagtgatc acgcaagccg gagcggcggg
       61 ctgacgttgg acgagctgcc aggtagctga aagcaggcag ccaggcagcc gagacacttc
      121 ccagcgattc cagcctgggc tccgcaggaa gcctcgctga atcccagcca gctggttcta
      181 accttccaga atcgcaatcc cttctcccca cagccagccc tcgccaagca agcagcagga
      241 tgtttgcagt gtcgcgccca gggctctgag actgagcctg ccatccactc gcacgccttt
      301 ctttcagggc ttttcggctg ttggctacac tgatgtgacc cccctccctt tttggaatga
      361 tggggatctt tttggtgtat gttggatttg ttttcttttc cgttttatat gtacaacaag
      421 ggctttcttc tcaagcaaaa tttaccgagt ttccgcggaa cgtgacggcg accgaggggc
      481 agaatgtgga gatgtcctgc gccttccaga gcggctccgc ctcggtgtat ctggagatcc
      541 aatggtggtt cctgcggggg ccggaggacc tggatcccgg ggccgagggg gccggcgcgc
      601 aggtggagct cttgcccgac agagacccgg acagcgacgg gaccaagatc agcacagtga
      661 aagtccaagg caatgacatc tcccacaagc ttcagatttc caaagtgagg aaaaaggatg
      721 aaggcttata tgagtgcagg gtgactgatg ccaactacgg ggagcttcag gaacacaagg
      781 cccaggccta tctgaaagtc aatgccaaca gccatgcccg cagaatgcag gccttcgaag
      841 cctcgcccat gtggctgcag gatatgaagc cccgcaagaa cgtctccgca gccatcccca
      901 gcagcatcca tggctctgcc aaccaacgaa cgcactccac ctccagccct caagtggtag
      961 ccaaaatccc caaacaaagt ccacaatcag tgtctccaat ccttccagaa gtcaaacatc
     1021 tccacagacc acctctacta gtccttcctt tcttctctct gtcttcactt ttttctactg
     1081 acccccttcc caccttccca acgtcacaca gaactgtgaa gcggcttcct gctcctcttc
     1141 cccaacctgg ccatggatca acccctggtg tgcagagctg cgtgctggct cctccaggta
     1201 aattgcccag gtcgctcgca ctcccaaagc tgtcatgcaa gtcactggtg tctcctgctt
     1261 ccaattcccc accctctcac atctcgtcct tcccagtctc taggcagcct ttctccctcg
     1321 atcactcctt cctgacactc ttacctctct tctctttgca ggctggtcac ctatttactg
     1381 gctcctagca ttctcctctc tcctttattg gcctcctccc caactaaatt cctctcttaa
     1441 atatagttct tttcccattg tcaactgcct gatcttctca tccacttcca tggttttgac
     1501 tgctaaattt tcttaggaaa ttgttcgagt cacctttgta cttctgactc atttctgtag
     1561 atccagactc atgttcactc ttgtccccaa agtatctaca tatatatcct gcaaaaactg
     1621 tggcagagta aggatgtctg cacacttgtc tccatcccat gcattgaagc ctattttcct
     1681 tcccctgagc ataggctggc ctgtgaccac tctgcccaat aaagtatgaa gaagtgagct
     1741 gtgccaattc tagacctatc ctttacaggg gctggcagca cctgctgagc cctcctggaa
     1801 gccagccact gtggaagcag tgcagccacc ttactgagtg aagcccagcc aaggaccttg
     1861 gtgtgcgagc ctggaagcag ccttgggcag ccagtcaccc cagccttcct ccagccacag
     1921 ctccagtggc tgtctcattg cagcatgagg gagcccaagc aaacactgcc cagctaagta
     1981 cagacaacac gcagaacaga gacagatgat gatctcctgt cattttaagg cactaggttg
     2041 tagtgaggtt tgtttcatga tagataccca gatcagacat ctaaaactca aatattcaag
     2101 actgaattta tcttagcttt ctcaccaaaa agaaatgttc ttcctcctat gatcccaaac
     2161 tcttttaata gcatttatca cagtcattgg tcttgaggaa gccttgaaaa tgttctcatc
     2221 tcttctgtca gctgccacac tgaattgtcc tagtaattgt ctccctaaaa catccttgag
     2281 aagctgcgtc ttttctgttc taaccaatac tggtttcatt gtcaacacag gccctcttca
     2341 ctttcctcat ctaatccaat ctattccaaa aagaatttct tgttttaact ctaatacaag
     2401 ggacgtatca caacagagca tgtgtgaaat gattattttt ttcaaagtgc caacattagt
     2461 ttttgtagtc taactccagc cttgtttctt ctgagttcct aatctcattc agtctttcca
     2521 tttggtattg cctgaatgtt ttcagatatt ttgttacctc tatggctttg caaatgctgt
     2581 ttcctttgta tgagtctttt cctatttgct gagttcctac aaaaatgcaa actcctttgt
     2641 taaagctttc tccttttctc ttagtcagaa ttggttactc atcaagttct cagcaatttg
     2701 tttatactta ctttgaagcc ctaactgtgc cttgtattgt tgaaccttta gtgctcaaag
     2761 tcacacattc tggaaaacct cttagtttta agcaaactag gacagtttat caccctaact
     2821 ataacttctt ggctacaaat actatagctt gtttctgcaa ttcctctatg tgccctgaac
     2881 aagtggggct catgttatta ttattttgta taattatgtt ttcataatta gataatttta
     2941 ccactactct agaactgatc aagactccca aacagtgttt ctcaaagtga gttgtgcagc
     3001 ctacctatgc cagactcatc agggagctta ttaaaaattc atattccaga actccaccca
     3061 gtgcctactg aatcagcatc tctgagtgta gaaccagaaa taagtattct atgttccaaa
     3121 agttaaaaga atcattggct ttttgaagtt tttcagggta aaaaaatttt cttcttatca
     3181 tttactatga gatatatatc tgtatgtgta tctgtgtcat gctacaaaat acttttttta
     3241 gaggctctgt tctgttgctc ttattgtttc caatgttggg atggactttt gtgaagctgt
     3301 tcactgctgt gatcaacagc tggtatttgt aaggaaactg gctgcagtga aggtggtact
     3361 tgtgtctccg tgtgtggagt ctgtagtagc tcagcaggaa tgctgattct ctgaactatg
     3421 aaatacaatt attgtgtgtt caccatgatg tgaacctgac tgttaagagg cagctgctgc
     3481 aacagctgcc aggagccaag agtggccact ttcagcagga ttgatcttaa cacaggatgt
     3541 caaagtcatt gggaggaggg agatgaggga ctgagggtct ttgcagggag agtgcttgtc
     3601 tcatttaata tgtgagtaaa tggtgcactg ctttgaggta gagtcagtca tataattcag
     3661 cccttaccgc tgatttttgt ttaaatgatc caacttggct gcttacacag gttaaattaa
     3721 tttaatcatt gtaattctat catataaatg gcaactatgt aaatcaagtg tctatgaata
     3781 agacaaaaat agatataagg gaatgatttg gataatacag gccaaggaat ctgctagggc
     3841 tatatttgaa ccagaattat gtagattaag agtctatact ggttaaattc tcctgcaaac
     3901 catatttaat tttactcatt gaagttcaga actatttggg cctatgatat caaggttgga
     3961 tgggtttttc cattcataac tggccacatg aaggcttgct tgtgactact agttcctctg
     4021 taattaagaa gacatgaaac ggaatttgcc agtgttctaa gttcttgtct caagtgattc
     4081 catgatgtct gccacttcag gaagccacca gaggagcagc ttcctggcta gatggccaaa
     4141 gtgttgaaaa cttgctagaa aggcttcact ctgttggtca caataacaca caccctaaaa
     4201 gagcaagaaa ggtcaagagc tccttcttcc aaggaccact tctgccactg ataggctgaa
     4261 ccagtgcctt catctgagca gcgaaggggc gtaaatgagc agggacacac tcctcagacc
     4321 ttctgcctct ggctctgcct actcatttgt agaggcacta gtgcacagcg gttaaagagg
     4381 aaggctgctt cacatctcag ctccatcact cacagcacag tatgtctgtt ccctcatttc
     4441 tttctttttt tttttttttt gttgttgttt tgagatggag ttttgctctg tctgtcaccc
     4501 aggctagagt gcagtggtgt gatcccggct cactacagcc tccacctccc gggttcaagc
     4561 aattctcctg cctcagcctc ctgagtagct tggattacag gtgcgcacca ccacgcccgg
     4621 ctaatttttg tatttccagt agagacaggg tttcaccatg ttggccaggc tggtctcaaa
     4681 ctcctgacct caagtgatcc cctctctttg gcctcccaaa gtgctgagat tgcaggcatg
     4741 agccactgtc cccggcctgt ttcctcattc cttaaatgag aactatacta taatcctcac
     4801 agggttttga caattgaagg aaatgatgta catatgaaga ttgacactta ataatccctg
     4861 aatgaatggt gactagttgc tgtaataata tgactattat tgcatatgct tatatacaat
     4921 tatcagcaat gaaatgatta gagttaatgg tctttaccac ctggttcttc taggcaaata
     4981 tcttccttgc tggttgtgtg gaagtgatgg gttgaggaag gaagactaga tctccatttc
     5041 tggcttatgt tttatgattt ataatttcag agcttgcttt tttttcttct gtcacaatgc
     5101 cattaattga tgataaattt tcctctaaat aagcacaaca tattagccac cagctgtctt
     5161 gcccaaggtt gtaactagat ctgtattata aaacatgata aaattccaaa ggatttttaa
     5221 gaatttaaac tgcaacctga ataaataaca ggtattctaa agccataatt atacaaattg
     5281 gtgttcatct taattaaatt caagctttca aaaaagattt tctgagtttt taaaatcaca
     5341 aagtaattag caatacatct gaaaacataa acaagttaga atattatata aagccttaaa
     5401 aagagacaaa aataaaatag gaatataaat taataatgaa aatttcatag tttatggtac
     5461 caggtagata cagatttgat tcttagattt gctatctacc agcttgttac tttgggtgag
     5521 ctgctcacaa aatctctctg aagcttaaag tcttatgtat aaaactgata tggtaatact
     5581 tatctgccaa gggtcatttt tagcattaaa tgagataatg gattttaaaa atctaggaga
     5641 gtaaacctag catgtgagtg agctcagcaa tgcctagttc tctacctctt tacctaccag
     5701 ataggaaaat atgctacaaa ataactatta tttaagagga caataaagaa acagaaatat
     5761 gaatagatat taaagaaaat aaaaacaagc ctggaaagct cgaaaattat acaaaataat
     5821 atctaatgaa tttaaaaatg taacagttaa agaaggacct atttaattaa taatgccaaa
     5881 aggagacata tgatcacagt ttacaatata tatccaaatg aaggccagtt aaagaactaa
     5941 gcaggaaaga aaaatcaaat ataggaagat tagcataaaa taagatactt gtggctttga
     6001 aggttaaaag ttacaaaata atttgcaagt gaaaatattt tgctataact ttaaaatttt
     6061 atttaagtaa ataatatgta actaaaaagt aaagcatcaa acaaggaaat atttgtgtct
     6121 aatacttagg aaaataataa atgtcaatat ttacagatgc tgtgattatg taacccactc
     6181 ctaatcactc ctaatcagtc gtaatagaga tattaaaagt gatcatataa tatgaataaa
     6241 attaagataa aagtataaac ttaggtcaac cttctacata actccaatac caaaatagaa
     6301 aatattttag gaataatatt gaatcctcaa tagtagcaac aagtaaaaga tataaaatat
     6361 ataatctttt ttttacaaag tatggttgca aataagtagt atgaatatga agaccactaa
     6421 aacacttcat tgagagagtt taggtttgaa taaatgagtt acaatgctat gtttttggat
     6481 ggcccatctc agaattgcaa atctgtcagg tttttcagaa gtatttatag atttgatgca
     6541 gtcccagtca aaacaccttc tcattaaaaa aaaattgata ggtataatct tggcaaaagt
     6601 tttctaaatc aacaagcatc ataaaggtta cagtgaatca gacattctgc tacattgcca
     6661 ctggcatggt gaatcagtac ttcccttgtg aaggaaaatt tgtcagggaa gagtactcac
     6721 aagcctttag attgtgcagc ccatatgtcc ctgaaatcat acttctgaga agaaattcca
     6781 aggatatcat agcgagtcat gaattgcaat acttaccatg gagtttttca tacacctgga
     6841 aatacacaga tgaccaaaag gaaagttacc tagtgaatgt gttaaagcat acagtgaaca
     6901 tcaagcagct tctagaatca tcttctcaaa gaatgtttgg agacattaga aaggattcag
     6961 tacatgacat cacgtgaaaa aacataggat acaaaacttt aaagtgaaaa aatatatagc
     7021 atacagaact ttaaatcagt ctgagccatg tgcatagaaa aataaaagaa aaaaagaaaa
     7081 tgtacagcag tcaatgtaag ttatgatttt taatttttta ttgttttgct tgtttataac
     7141 ttttgtacaa tgataatgta ttactttgtt ataagcagaa aaagaaaatt taaatttttt
     7201 ccaattaaaa aatggtaaac agttgtctca tgagagagaa aataaattag caaacacata
     7261 aaatatttca acaaataaag agaagcaaag taaaataatg gtgtataatt atagagttca
     7321 ggacaaaatc ttaaaaatat ctacacatgt acatatatgt acccaaagta ctgttgtgaa
     7381 aatggtcggt actcagaaat tgctagtagc attgaaatta ggaactttgt attttattat
     7441 atcttatttc ctggaggctg ggtggagaac atgaccatca agttagtctt gtttttctaa
     7501 gcaaataggt gtgatcttga tgaattcata ttgattaaat aaatcaaaca catacaagca
     7561 aataaaatat catgcaatca tttttcctgt caatgagatg actcacacaa cccccaattc
     7621 caagggagat gaaagtgagg agcaatgcat tgtcattggg agtatcaagg gaaatcggac
     7681 acaggaagat ttataaatga gaattatgtt ttacttaatg caactgcttc acaacagact
     7741 ctgagagagc atttttgcat gaattcagaa tcctataggt ataaaacata cctaatatag
     7801 gtgaaacagt gcttgaatta aagcaaatag taaaatccag gagttgtgat ttcttattcc
     7861 atgaagctga caaatatgaa gctgtagaga aaattttaaa gatgaaatta agttaagcaa
     7921 ttttattatc ttcacagaca aacattttaa tgaagttaaa taatgcagtg aaatacttca
     7981 aattttaaaa tgtaaaggta tcaagcactg tgcagtgaag ggctctgtta tgagtcaatg
     8041 tttttcttgc ttcattttga tggcttctgt tacagacaca ccctgaggag cctgttcgtc
     8101 agccttgtat ataatctttt atctttagtt tttctgatta aacaaatcca tatgctatga
     8161 aggcaatttt ctaacttcta gcgttgtaaa tagttaattt gaaaaatcct acatttaggg
     8221 attaagctgt agaatcacaa ccactaaata gaaaaaaaaa gtttagaatt taaaacctca
     8281 ctctatttca aactacctga aaatattata agggttgtga agataggaat tgtgtcctga
     8341 actttgggtg tcattgcagc acctagcatt gtgtttagca tgtacttaga gttaaatgtt
     8401 tagggataga aagttacgtt ttggtttatg tatagtgcaa aacacttctg aggataatac
     8461 cactgctaag aatatacatg aagtttaatg taatttggtg aacgtttaag aaaacaactc
     8521 cagactgcct atgtagcaat ggtcagaaaa gattaaaaaa cagcccttgg accatccttc
     8581 attatgtatt tgtgatgata atattaattt atttaaaatg atatttaatg acaaattatg
     8641 tctgggaagt ttgatgaaca aattccaggc aatggcttac ttctgtcctt ttatttgtat
     8701 atcttgataa atgagatgtg aattttaaaa atcttgcgtc aaatatttct agttacttaa
     8761 tgctgatagc taagaagata acttctacta atgaagataa ttaataaagc attctaatta
     8821 agaaaacttg aaatagctaa attaaggaaa agggtaaggc cactggctca aacttggaaa
     8881 atatatgggt aaaatcttaa gacattttcc ttgtattaaa acaggtgagt tttctgaagc
     8941 catgtaattt atgcttttgt aggtcctatt gacattaggt cctccaataa ttccttcctc
     9001 aaagtcagac attaatgaac cataaaaatt agttttttag ttttttgttt gttttttttt
     9061 gtttttgaga cagagtctca ctctgtcacc caggctggag tgcagtggcg tgatctcggc
     9121 tcactgcaag ctccacctcc cgggttcaaa cagttctctg catcagcctc gcaagtagct
     9181 gggactacag gcatgcacca ccacgcccag ctaattttta tgtttttagt agaaacaggg
     9241 tttcaccatg ttggccagga tgatcttgat ctctcgacct cgtgatctgt ctgcctcggc
     9301 ctcccaaagt gctgggatta caggcgtgag ccaccgctcc cagcctttag tttttatatt
     9361 tataaatcat ggctatatct ttatttttca atttacataa gaagatatgt ggaaaatgaa
     9421 atcacatatt tggagccatg tttcttccct tctttctttt tcttctattt ttttcactct
     9481 gagttcctca gttgccattt ctttaaaatt atgagttgtt tttcctgctt tgatgagaga
     9541 tttttctctg acagtattgg tgatggaggt ctatagaaac attcaaagag ggcgtggata
     9601 aggagaggta ttctttattt caccaactga tgagcgattt ctcagatatt cagccaaact
     9661 gacctctgtt tcctcaactc acgagttatt cttttctctg cccttttcag ttagtagtca
     9721 ataatactag ctgtgatgca cttctgttgg cttcctaatt cagggcaagc tgtcctgact
     9781 gagccgggga agggctctgg gtgcatgatc gctgaaagga caccagtgca catggatgcc
     9841 atttgtctcc attgcattcc ccaacttcaa tacactttct gaaaccctta gtcaaattta
     9901 gcaccattca tgatcagggc aacaaaacca catgtggaat tcctaatatg gaatttgtga
     9961 ttattcaaat aaattttgga ttaaaactac ctatgcgtga ttaataaaga gaatgctaac
    10021 gaataatgaa agcagacagt caggaagcat ttttaaactc tgtgactaaa tagtttcaag
    10081 cattttagca acacttgtct atatatcagt aaatgtagtg ctaattataa agcattctta
    10141 tttatgcatt aaagcagtta ttaaatata
//
