LOCUS       NM_001365077            2799 bp    mRNA    linear   PRI 08-APR-2024
DEFINITION  Homo sapiens V-set and immunoglobulin domain containing 10 like 2
            (VSIG10L2), transcript variant 1, mRNA.
ACCESSION   NM_001365077
VERSION     NM_001365077.2
KEYWORDS    RefSeq; MANE Select.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 2799)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AP000842.6.
            
            On Jan 26, 2021 this sequence version replaced NM_001365077.1.
            
            ##RefSeq-Attributes-START##
            MANE Ensembl match     :: ENST00000686984.1/ ENSP00000509422.1
            RefSeq Select criteria :: based on manual assertion, conservation,
                                      longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-94                AP000842.6         108309-108402
            95-445              AP000842.6         109951-110301
            446-721             AP000842.6         110570-110845
            722-997             AP000842.6         112279-112554
            998-1246            AP000842.6         113175-113423
            1247-1507           AP000842.6         114078-114338
            1508-1798           AP000842.6         115665-115955
            1799-2095           AP000842.6         116352-116648
            2096-2218           AP000842.6         117322-117444
            2219-2243           AP000842.6         117747-117771
            2244-2296           AP000842.6         117880-117932
            2297-2799           AP000842.6         118082-118584
FEATURES             Location/Qualifiers
     source          1..2799
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /chromosome="11"
                     /map="11q24.2"
     gene            1..2799
                     /gene="VSIG10L2"
                     /note="V-set and immunoglobulin domain containing 10 like
                     2"
                     /db_xref="GeneID:338667"
                     /db_xref="HGNC:HGNC:27879"
     exon            1..94
                     /gene="VSIG10L2"
                     /inference="alignment:Splign:2.1.0"
     CDS             13..2394
                     /gene="VSIG10L2"
                     /note="isoform 1 precursor is encoded by transcript
                     variant 1; V-set and immunoglobulin domain-containing
                     protein 10-like 2"
                     /codon_start=1
                     /product="V-set and immunoglobulin domain-containing
                     protein 10-like 2 isoform 1 precursor"
                     /protein_id="NP_001352006.1"
                     /db_xref="CCDS:CCDS91619.1"
                     /db_xref="GeneID:338667"
                     /db_xref="HGNC:HGNC:27879"
                     /translation="MVGQRAQHSPVSLLLLIHLCLLHLRASGQPHPTPEAPVEEVVSV
                     QGVRGGSVELACGSGPAPLLVLWSFTPLGSLVPRPVAVTDGAMSKVEAIASALGVVSL
                     RNSSLVLGELHEGARGHFLCQVLHVAGGQLHAAYSHLTLAVLVPVSKPQVRLSNPSPV
                     EGASVVATCAVREGTEPVTFAWQHRAPRGLGEALVGVTEPLFQLDPVNRTHLGWYMCS
                     ASNSVNRLSSDGAFLDVIYGPDKPVITMEPLGLTEEGFWASEREEVTLSCLAASNPPS
                     HYVWLRDHTQVHTGPTYVIARAGRVHTGLYTCLARNSYLDTRTQTTVQLTIYYPPEGQ
                     PSCAVHPSPEAVTLLCAWPGGLPPAQLQWEGPQGPGPTAPSNVTWSHAAAQLPSGSVF
                     TCTGQHPALAPPALCTVMLWEPLGRPTCWSTATMGDQFIMLSCEWPGGEPPATLGWLD
                     EQQQPLGGSSSSMAVHLLQAQEDLAGREFTCRGTHLLRTPDPHCHLQLEAPQLDVAEP
                     RVSVLEGGEAWLECSLRGGTPPAQLLWLGPQQQKVDPGTSGFMLHPEGAQLRLGIYDA
                     DPAHHRGTYQCVARNAVGNSSQSVLLEVLRYPAPPNVTISRLTYGRHRREVQLQWAIL
                     GPGNLTGFLVQRKASALGPGAGAWETAASDIEPESRGRRLGGLDPGVLYAFRILALNH
                     HTAGHPSEVKIPADPPFSAYPAVLGAAGTGMVVATVASLLVFQYAARHPETFPRLGQL
                     LVPTEQRHQQRGSREDAEAPAGLETPTTTPGLDPAQETTDSPVNVTITVTATP"
     exon            95..445
                     /gene="VSIG10L2"
                     /inference="alignment:Splign:2.1.0"
     exon            446..721
                     /gene="VSIG10L2"
                     /inference="alignment:Splign:2.1.0"
     exon            722..997
                     /gene="VSIG10L2"
                     /inference="alignment:Splign:2.1.0"
     exon            998..1246
                     /gene="VSIG10L2"
                     /inference="alignment:Splign:2.1.0"
     exon            1247..1507
                     /gene="VSIG10L2"
                     /inference="alignment:Splign:2.1.0"
     exon            1508..1798
                     /gene="VSIG10L2"
                     /inference="alignment:Splign:2.1.0"
     exon            1799..2095
                     /gene="VSIG10L2"
                     /inference="alignment:Splign:2.1.0"
     exon            2096..2218
                     /gene="VSIG10L2"
                     /inference="alignment:Splign:2.1.0"
     exon            2219..2243
                     /gene="VSIG10L2"
                     /inference="alignment:Splign:2.1.0"
     exon            2244..2296
                     /gene="VSIG10L2"
                     /inference="alignment:Splign:2.1.0"
     exon            2297..2799
                     /gene="VSIG10L2"
                     /inference="alignment:Splign:2.1.0"
     regulatory      2772..2777
                     /regulatory_class="polyA_signal_sequence"
                     /gene="VSIG10L2"
                     /note="hexamer: AATAAA"
     polyA_site      2799
                     /gene="VSIG10L2"
                     /note="major polyA site"
ORIGIN      
        1 ggagatgggg ccatggtggg tcagagggcc cagcacagcc cagtcagcct cctgctgctg
       61 atacacctct gccttctgca cctgagggcc tcaggccagc cccacccgac ccccgaggcc
      121 cctgtagagg aggtggtgtc tgtccaggga gtgcgaggtg gctccgtgga gctggcctgt
      181 ggctcagggc ctgccccgct gctggtcctc tggagcttca cccccctggg ctccctggtt
      241 ccccggcctg tggccgtcac cgatggagcc atgtccaagg tggaggccat cgcctcggct
      301 ctgggagtcg tgagtctgag gaacagcagc ctggtgctgg gggagcttca cgagggtgcc
      361 cgtggccact tcctatgcca ggttctgcac gtggctggcg gccagctcca cgctgcctac
      421 tcccacctca cgctggctgt gctggtgccg gtgtccaagc ctcaagtgcg actgagtaac
      481 ccgtcccctg tggagggagc ctccgtggtg gccacgtgtg cagtgcggga gggcacagag
      541 cccgtgacct ttgcctggca gcatcgggca ccccgaggcc ttggagaggc cctggtgggg
      601 gtcactgagc cactattcca gctggaccct gtcaaccgga cacacctagg gtggtacatg
      661 tgcagcgcca gcaactccgt gaacaggctg agcagtgacg gggccttcct ggacgtcatt
      721 tatggtcctg acaagcctgt gatcaccatg gagccgctgg gactcactga ggagggcttc
      781 tgggccagtg agagggaaga ggtgaccctg agctgtctgg ctgcctccaa cccacctagt
      841 cactatgtgt ggctccgtga ccacacgcaa gtccacacgg ggcctaccta tgtcatcgcc
      901 agagctggcc gtgtccacac aggcctgtac acctgcctgg cccgcaacag ctacctggac
      961 acccgcaccc agactactgt ccagctcacc atctactatc cccctgaggg acagccctcc
     1021 tgtgcagtgc atcccagccc tgaggctgtg accctgctct gtgcctggcc tggggggctt
     1081 ccgcctgccc aactgcagtg ggaagggcct cagggacctg gccctactgc ccccagcaac
     1141 gtcacctgga gtcacgcagc cgcccagctc cccagtggca gcgtcttcac ctgcactggc
     1201 cagcacccag ccctggcacc gcctgccctc tgcacagtca tgctctggga gcctctcggg
     1261 aggcctacct gctggagcac agccacaatg ggggaccagt tcatcatgct gagctgcgag
     1321 tggcctggcg gcgagccccc tgccacgctg ggctggcttg acgaacagca gcagcccctg
     1381 ggcggcagca gctcctcgat ggccgttcac ctcctgcagg cccaagaaga tctggctggc
     1441 agagagttca cctgccgggg cactcacctg ctcaggaccc ctgaccccca ctgccacctc
     1501 cagctggaag ccccacagct ggacgtggct gagccccgcg tgtcagtgtt ggagggggga
     1561 gaggcctggc tggagtgctc tctccgcggg ggcacaccac ctgcccagct cctctggctg
     1621 gggcctcaac aacaaaaagt ggaccccggc acttcaggat tcatgctgca ccctgagggt
     1681 gcccagctgc gcctgggcat ctacgatgct gacccggcac accacagggg cacctaccaa
     1741 tgcgtggccc gcaacgccgt gggcaatagc agtcagagtg tgctgctgga ggtcctgaga
     1801 tatccagctc ctcccaatgt caccatcagc cgcctgacct acgggaggca ccggagagag
     1861 gtgcagcttc aatgggccat cttaggaccc gggaacctga cgggcttcct ggtgcagcgg
     1921 aaggccagtg ccctgggccc aggagctggg gcgtgggaga cagcagctag tgacatcgag
     1981 ccagagagcc gaggacggcg gctggggggc ttggaccccg gggtccttta tgccttccgc
     2041 atcctggctc tgaatcacca cactgcagga catccctctg aggtgaagat accagcggac
     2101 ccccccttca gcgcctaccc agcggtgttg ggtgcagcag gcacgggaat ggtggtagca
     2161 acggtggcct ctctactggt gttccagtat gctgcccggc acccagagac tttcccccgc
     2221 cttggtcaat tgcttgttcc cacggagcaa aggcaccaac agaggggttc cagagaagat
     2281 gctgaggcac cggcaggcct tgaaacacca accaccaccc caggtttgga tcctgcacaa
     2341 gaaaccacgg attctccagt gaatgtcacc atcacagtga ctgcaacacc ataaggccca
     2401 aagaggaaga tgcaaatagg cttagggagg gcaggtggga tttgggaaga gcccttctgt
     2461 cagactttgg tcataaaacc aacgtagcta agacaccaac taccactttc acttaatacc
     2521 cagtcttcac aactggtaca aggcccagct gcagtgtccc taagtgacat ggttacaaga
     2581 gaagccctgg cccaccttgt ggaagacaga ggtggcagga caaggaagag gacccacaat
     2641 ggggagacag ggatctctgg gtgtctgagg gcaagtgaaa gccatggtac tgggaaggat
     2701 ctgtggtgct atagaagtat gagcaagcta gctgcttcca gaaaaaaagt ctgtggatgg
     2761 agcaattcct aaataaatca gagctgatgt tcacgccaa
//
