LOCUS       XM_047447824            5079 bp    mRNA    linear   PRI 25-AUG-2024
DEFINITION  PREDICTED: Homo sapiens VPS8 subunit of CORVET complex (VPS8),
            transcript variant X6, mRNA.
ACCESSION   XM_047447824
VERSION     XM_047447824.1
DBLINK      BioProject: PRJNA168
KEYWORDS    RefSeq.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000003.12) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001405.40-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/23/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5079
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /chromosome="3"
     gene            1..5079
                     /gene="VPS8"
                     /gene_synonym="KIAA0804"
                     /note="VPS8 subunit of CORVET complex; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 3 mRNAs, 81 ESTs, 590 long SRA reads, 8 Proteins, and
                     100% coverage of the annotated genomic feature by RNAseq
                     alignments, including 17 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:23355"
                     /db_xref="HGNC:HGNC:29122"
                     /db_xref="MIM:618366"
     CDS             210..4490
                     /gene="VPS8"
                     /gene_synonym="KIAA0804"
                     /codon_start=1
                     /product="vacuolar protein sorting-associated protein 8
                     homolog isoform X2"
                     /protein_id="XP_047303780.1"
                     /db_xref="GeneID:23355"
                     /db_xref="HGNC:HGNC:29122"
                     /db_xref="MIM:618366"
                     /translation="MENEPDHENVEQSLCAKTSEEELNKSFNLEASLSKFSYIDMDKE
                     LEFKNDLIDDKEFDIPQVDTPPTLESILNETDDEDESFILEDPTLLNIDTIDSHSYDT
                     SSVASSDSGDRTNLKRKKKLPDSFSLHGSVMRHSLLKGISAQIVSAADKVDAGLPTAI
                     AVSSLIAVGTSHGLALIFDQNQALRLCLGSTSVGGQYGAISALSINNDCSRLLCGFAK
                     GQITMWDLASGKLLRSITDAHPPGTAILHIKFTDDPTLAICNDSGGSVFELTFKRVMG
                     VRTCESRCLFSGSKGEVCCIEPLHSKPELKDHPITQFSLLAMASLTKILVIGLKPSLK
                     VWMTFPYGRMDPSSVPLLAWHFVAVQNYVNPMLAFCRGDVVHFLLVKRDESGAIHVTK
                     QKHLHLYYDLINFTWINSRTVVLLDSVEKLHVIDRQTQEELETVEISEVQLVYNSSHF
                     KSLATGGNVSQALALVGEKACYQSISSYGGQIFYLGTKSVYVMMLRSWRERVDHLLKQ
                     DCLTEALALAWSFHEGKAKAVVGLSGDASKRKAIVADRMVEILFHYADRALKKCPDQG
                     KIQVMEQHFQDMVPVIVDYCLLLQRKDLLFSQMYDKLSENSVAKGVFLECLEPYILSD
                     KLVGITPQVMKDLIVHFQDKKLMENVEALIVHMDITSLDIQQVVLMCWENRLYDAMIY
                     VYNRGMNEFISPMEKLFRVIAPPLNAGKTLTDEQVVMGNKLLVYISCCLAGRAYPLGD
                     IPEDLVPLVKNQVFEFLIRLHSAEASPEEEIYPYIRTLLHFDTREFLNVLALTFEDFK
                     NDKQAVEYQQRIVDILLKVMVENSDFTPSQVGCLFTFLARQLAKPDNTLFVNRTLFDQ
                     VLEFLCSPDDDSRHSERQQVLLELLQAGGIVQFEESRLIRMAEKAEFYQICEFMYERE
                     HQYDKIIDCYLRDPLREEEVFNYIHNILSIPGHSAEEKQSVWQKAMDHIEELVSLKPC
                     KAAELVATHFSGHIETVIKKLQNQVLLFKFLRSLLDPREGIHVNQELLQISPCITEQF
                     IELLCQFNPTQVIETLQVLECYRLEETIQITQKYQLHEVTAYLLEKKGDIHGAFLIML
                     ERLQSKLQEVTHQGENTKEDPSLKDVEDTMVETIALCQRNSHNLNQQQREALWFPLLE
                     AMMAPQKLSSSAIPHLHSEALKSLTMQVLNSMAAFIALPSILQRILQDPVYGKGKLGE
                     IQGLILGMLDTFNYEQTLLETTTSLLNQDLHWSLCNLRASVTRGLNPKQDYCSICLQQ
                     YKRRQEMADEIIVFSCGHLYHSFCLQNKECTVEFEGQTRWTCYKCSSSNKVGKLSENS
                     SEIKKGRITPSQVKMSPSYHQSKGDPTAKKGTSEPVLDPQQIQAFDQLCRLYRGSSRL
                     ALLTELSQNRSSESYRPFSGSQSAPAFNSIFQNENFQLQLIPPPVTED"
ORIGIN      
        1 agagcagtgg gtgcggtcac gtgggccggc ggtccacggc cggaatggca gcaagctcag
       61 gtaacgagtt tccagagagc gggcccgtgg aaggagacag gattgagggg ccgtattcag
      121 gagataatca ttcaggtctt cgtgagctaa ggccaaacaa acaaaaaaca cttgctttga
      181 tggactgaat actgttatta gaagtaaata tggaaaatga accagaccat gaaaatgtgg
      241 aacagagcct ctgtgccaag acgagcgaag aagagctgaa taagtctttc aatctagaag
      301 cttcactttc aaaattctct tacatagata tggacaagga actggagttc aaaaatgatc
      361 tgattgatga caaggagttt gatattcctc aagttgatac tcctccaaca ctggaaagca
      421 tactaaatga gactgatgat gaagatgagt cttttattct tgaggatcct acattgttaa
      481 acattgatac tattgattct cactcctatg atacttcatc tgtggcaagc tcagatagtg
      541 gtgacaggac caacttaaaa aggaagaaga aattacctga ttctttttca cttcatggat
      601 cagttatgcg ccattcactt ttgaagggaa tttctgccca gatagtgtct gcagctgaca
      661 aagtagatgc tggcttgcct acagcaattg cagtatccag tctgatagca gtgggtacat
      721 ctcatggatt ggctttaata tttgatcaga atcaagcttt gcgactctgt ctgggtagca
      781 ctagtgttgg aggtcagtat ggcgctatct ctgccctcag tatcaacaat gattgctcaa
      841 gacttctttg tggctttgct aaaggacaga tcaccatgtg ggatttggcc agtggaaaac
      901 ttctaagatc aataacagat gctcatcctc caggaacagc aatattgcat atcaagttta
      961 cagatgatcc aactcttgca atttgcaacg acagcggagg ctctgttttt gaattgacat
     1021 ttaagagagt gatgggagtg agaacctgtg aatctagatg tctgttcagt ggttccaagg
     1081 gtgaagtctg ctgtattgag cctctgcatt ctaagcctga gttgaaagat catcccatca
     1141 cacagttttc attattggcc atggcatcct tgacaaaaat actggtcatt ggattgaaac
     1201 catccttgaa agtatggatg acttttccct atggccggat ggatccttcc agtgtgccac
     1261 tgctggcctg gcactttgta gcagtacaaa attacgtgaa tcccatgctt gccttctgca
     1321 gaggagatgt tgttcatttt ctattggtaa agagagatga atctggagca atacatgtta
     1381 ctaagcaaaa gcatcttcac ctatactatg acctcatcaa ctttacctgg ataaattcac
     1441 gcacagttgt gctcttagac agcgtagaga agttgcatgt gattgatcgg caaacacaag
     1501 aggaattgga gacagtggag atctcagaag ttcagctggt ctacaatagc agccatttca
     1561 aatcactagc cactggagga aatgttagcc aggcactggc tttggttgga gagaaggctt
     1621 gttatcaatc catcagtagc tatggtggtc agatctttta tttggggaca aaatctgttt
     1681 atgtgatgat gctgaggagc tggagagaga gagtggatca tctcctgaaa caagattgtc
     1741 ttacagaagc gttggctctt gcgtggtctt tccatgaagg aaaagcaaaa gcagtagtgg
     1801 gattatcagg ggatgccagt aagcgaaagg ctattgttgc agaccggatg gtagaaatcc
     1861 tattccatta tgcagatcga gctctgaaaa agtgcccaga ccaaggaaaa atccaagtga
     1921 tggagcagca ttttcaggat atggtgcctg tcatagttga ttactgcctt ctgctgcagc
     1981 gaaaggatct tttatttagt cagatgtatg ataaattaag tgagaattca gtggccaaag
     2041 gagtattttt ggagtgcctt gagccatata ttttaagtga taaattggtg ggaatcacac
     2101 cccaagtaat gaaagacttg attgttcatt tccaagataa aaaattaatg gaaaatgtgg
     2161 aagcgctcat tgtacatatg gatatcacca gcctagatat tcagcaggta gttctcatgt
     2221 gttgggaaaa tcgtttatat gatgctatga tctatgtcta caacagaggc atgaatgaat
     2281 ttattagtcc aatggagaaa cttttcagag tcattgctcc tcctctgaat gcaggaaaaa
     2341 cactaacaga tgaacaagtt gttatgggca ataagctcct tgtatatatt agctgttgtc
     2401 tagcaggtcg tgcctatccc cttggtgaca tccctgaaga tctggttccc ttggttaaaa
     2461 accaggtttt tgaatttcta attcgcctgc attcagcaga ggcttctcct gaggaagaaa
     2521 tctatcctta cattcggact ttgctacatt ttgacacaag agaatttcta aatgtattgg
     2581 cactgacttt tgaagatttt aaaaatgaca agcaagctgt ggaatatcaa cagcgaattg
     2641 tggatatttt gttgaaagtt atggtggaga attcagactt taccccctca caagtaggat
     2701 gtctctttac cttccttgct cggcagcttg caaagcctga caacaccttg tttgtaaaca
     2761 gaacactttt tgatcaggtc cttgaattcc tttgtagtcc tgacgatgac tcccgacact
     2821 ctgaaagaca gcaggtcctt ttagaattgc tgcaggctgg aggcatagtt caatttgaag
     2881 agagtcgact catccggatg gcagaaaaag ctgagttcta tcaaatttgt gaatttatgt
     2941 atgaaagaga acaccaatat gataaaatta ttgattgcta cttacgtgac cctctgcgag
     3001 aggaagaagt ctttaattac attcacaata tcttatccat tcccggacac agtgcagagg
     3061 agaagcagtc tgtatggcag aaagcaatgg atcatattga ggaactcgtg tccctgaagc
     3121 cttgtaaagc tgcggagctg gttgccaccc acttttctgg acatattgaa acggtcatta
     3181 aaaaacttca gaaccaggtt ttgcttttca aatttttgag gagtcttctt gacccaaggg
     3241 aaggtattca tgtaaatcaa gaattactgc aaatatctcc ttgtatcaca gagcagttca
     3301 ttgagctgtt gtgtcagttc aacccaaccc aagttataga gactctgcaa gtccttgagt
     3361 gctaccgtct ggaagaaact attcagatta ctcagaagta tcaacttcat gaagtcaccg
     3421 cttatctatt ggaaaagaaa ggagatattc atggtgcctt cctaataatg ttagagagac
     3481 tacaaagcaa acttcaagag gtaacacatc aaggtgaaaa taccaaagag gatccctcat
     3541 tgaaggatgt tgaagatact atggtggaga ccattgctct ttgccagaga aattcacata
     3601 atttgaacca gcagcaacgt gaggcacttt ggtttccgtt attggaggca atgatggccc
     3661 ctcagaagct gtccagttca gccattcctc atctacactc tgaagctctg aagtctttga
     3721 ccatgcaagt tttaaatagc atggcagcat ttattgccct tccatcaatc ttgcaaagaa
     3781 tcttacagga tccagtttat ggaaaaggaa aacttggaga aatccaggga cttatcttgg
     3841 gaatgttaga tacctttaac tatgaacaaa ccctgctgga aacaacaacc agccttctaa
     3901 accaagatct ccattggtca ttgtgtaacc tgagagcttc ggtcaccaga ggactgaatc
     3961 ccaaacaaga ttactgctct atatgtttgc agcagtacaa gagacgccaa gaaatggctg
     4021 atgaaataat tgtctttagc tgtggccatt tgtatcactc attctgccta caaaacaaag
     4081 aatgcactgt ggaatttgag ggccaaacaa gatggacatg ctacaaatgc agttcaagta
     4141 acaaagtagg aaaactcagt gaaaattcat ctgaaattaa aaagggaagg ataaccccat
     4201 cacaggtaaa aatgtctcca tcgtatcatc agtccaaagg ggatcccact gctaaaaagg
     4261 gaacctcaga acctgttctg gatccacagc aaatccaagc atttgatcag ctttgccgtc
     4321 tctaccgagg aagctccagg ctggctctcc tcacggaact ctcccagaat cgcagcagcg
     4381 agagctatag gccattcagt ggctcgcaga gtgctcctgc tttcaacagc atcttccaga
     4441 atgagaactt ccagctgcag ctcattcctc cacctgtgac tgaggattga tgactccatg
     4501 gagcctggcc caggagaacc agagatgatc ccgaggcagc tggggagagg ccccgcctct
     4561 ggtgggcttg gcctccacca cctcccacgc ttctgagaag aggttccaaa ttgggcttct
     4621 gtgcccagag cgtccacagc accattccca gtgtagactc ccagtcttct ccacattgct
     4681 gtcatggcgt cagttcacca gactcattga ttttgttttg cttgttaagc aaaggaatgt
     4741 cacatacctc tgtccagctt tttaggaaat acatttcgcc tattgcgact ttttccattt
     4801 accctgaagc ctagaaagta ggtggaactc acacaaatgg cattccagag tctgccatac
     4861 tccgtctcct ccagctgctg gataatacag aggaacttca acttctacag ggaacagtgg
     4921 ttggccaggc tgcagtataa ctgaagcatg ccttggagag agcagacact gtgggggcca
     4981 gggccatctc cctttaatgt gttcatgtta aaacctattt gagtgtaaga cttgcccttt
     5041 ctaacaataa atgctccgtg tttaagttct gcaggtctc
//
