LOCUS       NM_001114403            1342 bp    mRNA    linear   PRI 04-APR-2024
DEFINITION  Homo sapiens uroplakin 3B like 1 (UPK3BL1), mRNA.
ACCESSION   NM_001114403
VERSION     NM_001114403.3
KEYWORDS    RefSeq; MANE Select.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 1342)
  AUTHORS   Desalle,R., Chicote,J.U., Sun,T.T. and Garcia-Espana,A.
  TITLE     Generation of divergent uroplakin tetraspanins and their partners
            during vertebrate evolution: identification of novel uroplakins
  JOURNAL   BMC Evol Biol 14, 13 (2014)
   PUBMED   24450554
  REMARK    Publication Status: Online-Only
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            EU341824.1 and AC105052.3.
            
            On May 17, 2019 this sequence version replaced NM_001114403.2.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR7346977.957547.1,
                                           SRR7346977.820034.1 [ECO:0000332]
            RNAseq introns              :: mixed sample support SAMEA1965299,
                                           SAMEA1966682 [ECO:0006172]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            MANE Ensembl match     :: ENST00000340457.8/ ENSP00000342938.8
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-979               EU341824.1         1-979
            980-981             AC105052.3         51127-51128         c
            982-1318            EU341824.1         980-1316
            1319-1319           AC105052.3         50789-50789         c
            1320-1342           EU341824.1         1318-1340
FEATURES             Location/Qualifiers
     source          1..1342
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /chromosome="7"
                     /map="7q22.1"
     gene            1..1342
                     /gene="UPK3BL1"
                     /gene_synonym="UPK3BL; UPLP"
                     /note="uroplakin 3B like 1"
                     /db_xref="GeneID:100134938"
                     /db_xref="HGNC:HGNC:37278"
     exon            1..162
                     /gene="UPK3BL1"
                     /gene_synonym="UPK3BL; UPLP"
                     /inference="alignment:Splign:2.1.0"
     CDS             51..842
                     /gene="UPK3BL1"
                     /gene_synonym="UPK3BL; UPLP"
                     /note="uroplakin-like protein; uroplakin-3-like protein;
                     uroplakin 3C protein; uroplakin-3b-like protein 1"
                     /codon_start=1
                     /product="uroplakin-3b-like protein 1 precursor"
                     /protein_id="NP_001107875.1"
                     /db_xref="CCDS:CCDS47675.1"
                     /db_xref="GeneID:100134938"
                     /db_xref="HGNC:HGNC:37278"
                     /translation="MDNSWRLGPAIGLSAGQSQLLVSLLLLLTRVQPGTDVAAPEHIS
                     YVPQLSNDTLAGRLTLSTFTLEQPLGQFSSHNISDLDTIWLVVALSNATQSFTAPRTN
                     QDIPAPANFSQRGYYLTLRANRVLYQTRGQLHVLRVGNDTHCQPTKIGCNHPLPGPGP
                     YRVKFLVMNDEGPVAETKWSSDTRLQQAQALRAVPGPQSPGTVVIIAILSILLAVLLT
                     VLLAVLIYTCFNSCRSTSLSGPEEAGSVRRYTTHLAFSTPAEGAS"
     exon            163..324
                     /gene="UPK3BL1"
                     /gene_synonym="UPK3BL; UPLP"
                     /inference="alignment:Splign:2.1.0"
     exon            325..535
                     /gene="UPK3BL1"
                     /gene_synonym="UPK3BL; UPLP"
                     /inference="alignment:Splign:2.1.0"
     exon            536..612
                     /gene="UPK3BL1"
                     /gene_synonym="UPK3BL; UPLP"
                     /inference="alignment:Splign:2.1.0"
     exon            613..733
                     /gene="UPK3BL1"
                     /gene_synonym="UPK3BL; UPLP"
                     /inference="alignment:Splign:2.1.0"
     exon            734..1342
                     /gene="UPK3BL1"
                     /gene_synonym="UPK3BL; UPLP"
                     /inference="alignment:Splign:2.1.0"
     regulatory      1322..1327
                     /regulatory_class="polyA_signal_sequence"
                     /gene="UPK3BL1"
                     /gene_synonym="UPK3BL; UPLP"
                     /note="hexamer: AATAAA"
     polyA_site      1342
                     /gene="UPK3BL1"
                     /gene_synonym="UPK3BL; UPLP"
                     /note="major polyA site"
ORIGIN      
        1 gacaggggag cctctggggc tgcagacact gcagacggac ggacagacag atggacaaca
       61 gctggaggct tggcccggcc atagggctct ctgcgggaca gtcccagctg ctagtgtcgc
      121 tgttgctgct actgacccgt gtccagcctg ggacagacgt ggctgcccca gagcacatca
      181 gctatgtgcc ccagctctca aacgacacct tggcggggag gctcaccctg tccaccttca
      241 cgctggagca gcctctaggc cagttcagca gccacaacat ctctgacttg gataccatct
      301 ggctggtggt ggccctcagc aacgccaccc agagcttcac ggccccacgg acaaaccagg
      361 acatccctgc tcctgccaac ttctcccaga ggggctacta tctcacactg agggccaacc
      421 gggtgctgta ccagaccaga ggccagctcc atgtcctccg cgtcggcaat gatacccact
      481 gccaaccaac aaaaattggc tgcaaccatc ccctaccagg acccggcccc tacagggtga
      541 agttcctggt gatgaatgac gaaggacccg tggctgaaac caagtggtcc agcgacactc
      601 gcctgcagca agcccaggca cttcgggctg tccccggccc ccagagcccg ggcaccgtgg
      661 tcatcatcgc catcctgtct atcctcctgg ccgtcctcct cacggtcctc ctggctgtgc
      721 tcatatacac ctgcttcaac agctgcagga gcacttccct atcaggccca gaggaggcag
      781 ggagtgtgag aagatacacc acgcacctcg cgttcagcac tcctgccgag ggggcttcct
      841 gaggggttcc agaggggccc acgtgtccct ccacctcctc cctggcccag gctgcagagc
      901 ctgagctggg acacgccctg aagcttctgg accctgagag agattgtttc ttttctttac
      961 tatttttttt tttttttttt tgagacggag tctcactctg tcgccaggct ggcgcgatct
     1021 tggctcactg caacctctgc ctcacgggtt caagcgattt tcctgcttca gcctcctgag
     1081 tagctgggac tacaggcaca cgccaccatg cccagctcat ttttgtattt ttagtagaga
     1141 tggggtttca ccatgttggc caggatggcc tccatctctt gaccttgtga tccgcccgac
     1201 tcggcctccc aaaatgctgg gattacaggc gtgagccatc aagtctggcg agagagattg
     1261 tttctagatg agggtggggg cgggtgtcct tagcccaaag cttgtgccag tctctatcgg
     1321 aaataaatgc ccccaaaacc tc
//
