LOCUS       NM_203412               1505 bp    mRNA    linear   PRI 08-JUN-2024
DEFINITION  Homo sapiens ubiquitin like 4B (UBL4B), mRNA.
ACCESSION   NM_203412 XM_089415
VERSION     NM_203412.2
KEYWORDS    RefSeq; MANE Select.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 1505)
  AUTHORS   Luck,K., Kim,D.K., Lambourne,L., Spirohn,K., Begg,B.E., Bian,W.,
            Brignall,R., Cafarelli,T., Campos-Laborie,F.J., Charloteaux,B.,
            Choi,D., Cote,A.G., Daley,M., Deimling,S., Desbuleux,A., Dricot,A.,
            Gebbia,M., Hardy,M.F., Kishore,N., Knapp,J.J., Kovacs,I.A.,
            Lemmens,I., Mee,M.W., Mellor,J.C., Pollis,C., Pons,C.,
            Richardson,A.D., Schlabach,S., Teeking,B., Yadav,A., Babor,M.,
            Balcha,D., Basha,O., Bowman-Colin,C., Chin,S.F., Choi,S.G.,
            Colabella,C., Coppin,G., D'Amata,C., De Ridder,D., De Rouck,S.,
            Duran-Frigola,M., Ennajdaoui,H., Goebels,F., Goehring,L., Gopal,A.,
            Haddad,G., Hatchi,E., Helmy,M., Jacob,Y., Kassa,Y., Landini,S.,
            Li,R., van Lieshout,N., MacWilliams,A., Markey,D., Paulson,J.N.,
            Rangarajan,S., Rasla,J., Rayhan,A., Rolland,T., San-Miguel,A.,
            Shen,Y., Sheykhkarimli,D., Sheynkman,G.M., Simonovsky,E., Tasan,M.,
            Tejeda,A., Tropepe,V., Twizere,J.C., Wang,Y., Weatheritt,R.J.,
            Weile,J., Xia,Y., Yang,X., Yeger-Lotem,E., Zhong,Q., Aloy,P.,
            Bader,G.D., De Las Rivas,J., Gaudet,S., Hao,T., Rak,J.,
            Tavernier,J., Hill,D.E., Vidal,M., Roth,F.P. and Calderwood,M.A.
  TITLE     A reference map of the human binary protein interactome
  JOURNAL   Nature 580 (7803), 402-408 (2020)
   PUBMED   32296183
REFERENCE   2  (bases 1 to 1505)
  AUTHORS   Fragoza,R., Das,J., Wierbowski,S.D., Liang,J., Tran,T.N., Liang,S.,
            Beltran,J.F., Rivera-Erick,C.A., Ye,K., Wang,T.Y., Yao,L., Mort,M.,
            Stenson,P.D., Cooper,D.N., Wei,X., Keinan,A., Schimenti,J.C.,
            Clark,A.G. and Yu,H.
  TITLE     Extensive disruption of protein interactions by genetic variants
            across the allele frequency spectrum in human populations
  JOURNAL   Nat Commun 10 (1), 4141 (2019)
   PUBMED   31515488
  REMARK    Publication Status: Online-Only
REFERENCE   3  (bases 1 to 1505)
  AUTHORS   Hasson,S.A., Kane,L.A., Yamano,K., Huang,C.H., Sliter,D.A.,
            Buehler,E., Wang,C., Heman-Ackah,S.M., Hessa,T., Guha,R.,
            Martin,S.E. and Youle,R.J.
  TITLE     High-content genome-wide RNAi screens identify regulators of parkin
            upstream of mitophagy
  JOURNAL   Nature 504 (7479), 291-295 (2013)
   PUBMED   24270810
REFERENCE   4  (bases 1 to 1505)
  AUTHORS   Fox,C.S., Liu,Y., White,C.C., Feitosa,M., Smith,A.V.,
            Heard-Costa,N., Lohman,K., Johnson,A.D., Foster,M.C.,
            Greenawalt,D.M., Griffin,P., Ding,J., Newman,A.B., Tylavsky,F.,
            Miljkovic,I., Kritchevsky,S.B., Launer,L., Garcia,M.,
            Eiriksdottir,G., Carr,J.J., Gudnason,V., Harris,T.B., Cupples,L.A.
            and Borecki,I.B.
  CONSRTM   GIANT Consortium; MAGIC Consortium; GLGC Consortium
  TITLE     Genome-wide association for abdominal subcutaneous and visceral
            adipose reveals a novel locus for visceral fat in women
  JOURNAL   PLoS Genet 8 (5), e1002695 (2012)
   PUBMED   22589738
REFERENCE   5  (bases 1 to 1505)
  AUTHORS   Yang,F., Skaletsky,H. and Wang,P.J.
  TITLE     Ubl4b, an X-derived retrogene, is specifically expressed in
            post-meiotic germ cells in mammals
  JOURNAL   Gene Expr Patterns 7 (1-2), 131-136 (2007)
   PUBMED   16872915
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AK098556.1 and AA608970.1.
            
            On May 17, 2019 this sequence version replaced NM_203412.1.
            
            ##Evidence-Data-START##
            Transcript is intronless :: BC058929.1, AK098556.1 [ECO:0000345]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            MANE Ensembl match     :: ENST00000334179.5/ ENSP00000334044.3
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-1497              AK098556.1         5-1501
            1498-1505           AA608970.1         3-10                c
FEATURES             Location/Qualifiers
     source          1..1505
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /chromosome="1"
                     /map="1p13.3"
     gene            1..1505
                     /gene="UBL4B"
                     /note="ubiquitin like 4B"
                     /db_xref="GeneID:164153"
                     /db_xref="HGNC:HGNC:32309"
                     /db_xref="MIM:611127"
     exon            1..1505
                     /gene="UBL4B"
                     /inference="alignment:Splign:2.1.0"
     CDS             93..617
                     /gene="UBL4B"
                     /codon_start=1
                     /product="ubiquitin-like protein 4B"
                     /protein_id="NP_981957.1"
                     /db_xref="CCDS:CCDS820.1"
                     /db_xref="GeneID:164153"
                     /db_xref="HGNC:HGNC:32309"
                     /db_xref="MIM:611127"
                     /translation="MFLTVKLLLGQRCSLKVSGQESVATLKRLVSRRLKVPEEQQHLL
                     FRGQLLEDDKHLSDYCIGPNASINVIMQPLEKMALKEAHQPQTQPLWHQLGLVLAKHF
                     EPQDAKAVLQLLRQEHEERLQKISLEHLEQLAQYLLAEEPHVEPAGERELEAKARPQS
                     SCDMEEKEEAAADQ"
     regulatory      613..618
                     /regulatory_class="polyA_signal_sequence"
                     /gene="UBL4B"
                     /note="hexamer: AGTAAA"
     polyA_site      648
                     /gene="UBL4B"
                     /note="major polyA site"
     regulatory      1481..1486
                     /regulatory_class="polyA_signal_sequence"
                     /gene="UBL4B"
                     /note="hexamer: AGTAAA"
     polyA_site      1505
                     /gene="UBL4B"
ORIGIN      
        1 gttgataggg agaagccaac atctcccgca ggacccccta atcttcaggg cagctcccag
       61 agcatggatc cctcctgatt ccactcagcc cgatgttcct cacagtcaag ctgctcctgg
      121 gccagagatg cagtctgaag gtgtcagggc aagagagtgt agccacgctg aagagactgg
      181 tgtccaggcg gctgaaggtg cctgaggagc agcagcacct gcttttccgt ggccagctcc
      241 tggaggatga caagcacctc tctgactact gcattgggcc caatgcctct atcaatgtca
      301 tcatgcagcc cttggagaag atggcgctaa aggaggccca ccagccgcag acccagcccc
      361 tgtggcacca gctgggactg gtcctagcta aacactttga accacaggat gccaaggccg
      421 tgctgcagct gctaaggcag gagcacgagg agcgcctgca gaagataagc ctggagcacc
      481 tggagcagct ggcccagtac ctcctggcag aggagcctca cgtggagcca gctggagaga
      541 gggagcttga ggcgaaggca cggcctcaga gctcctgtga catggaggag aaggaggagg
      601 cagcagctga tcagtaaacg ggccatccta cccatttgca tgctaaaatt ctcccggcct
      661 catccttacg tgttccctgg tgacttttcc tactacttcc tgctgatgtg gatgcgtcca
      721 cacccctttt tgaaccttcc aagcagctgg agggtttttg gatccctgtc ccctcttggg
      781 cctgaggtcc tccctctgaa atgcagagtg aaccaaccct catcaccatg cttcccctag
      841 aagggttctg atcaccggag ggcagcccca aaggccacag tcccctcctg tgctggcagc
      901 tttgcccaca catacccagc agctccccag gctgaaagca gccctggccc agggtctcca
      961 tggttctagg cagaccctct ttctccttcg ggacagaaag acaatgtgag ttcattttcc
     1021 tccatcctca gaccgtgaca tctcccctag gctccccagc agccaagagg agaggaatgt
     1081 caggtagctg ccccttgcct tctgggtgag gctgcccctg ctgttctcct gcttgtgctt
     1141 ccagcttaag ggacaggcac agcagaggtg agagtgggag gagggcacgt accgggtgcc
     1201 agccctggag ccctcaggga gacagacaca gaccaagaat agcaggaaac tgagcctcag
     1261 gcagaaaaaa agttcagcaa agtcatacac tccctgtggc cagcgtgaac agagccatgc
     1321 cccaccctcc cagactgatc agtcagtagg tatcacagct cacattacct gcccagcgct
     1381 gcccaaggct ccctggaagg aaaaatggta tctgtcaatg aggatccttg ccctcacaga
     1441 gcacgcagcc tagatgcaga gagctgctat acatgtgaaa agtaaagtgg tgacatgaaa
     1501 ctaga
//
