LOCUS       XM_011510215            4064 bp    mRNA    linear   PRI 25-AUG-2024
DEFINITION  PREDICTED: Homo sapiens ubiquitin associated protein 2 like
            (UBAP2L), transcript variant X2, mRNA.
ACCESSION   XM_011510215
VERSION     XM_011510215.4
DBLINK      BioProject: PRJNA168
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000001.11) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 5, 2022 this sequence version replaced XM_011510215.3.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001405.40-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/23/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 1% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..4064
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /chromosome="1"
     gene            1..4064
                     /gene="UBAP2L"
                     /gene_synonym="NEDLBF; NICE-4; NICE4"
                     /note="ubiquitin associated protein 2 like; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 106 ESTs, 597 long SRA reads, and 97% coverage of the
                     annotated genomic feature by RNAseq alignments, including
                     125 samples with support for all annotated introns"
                     /db_xref="GeneID:9898"
                     /db_xref="HGNC:HGNC:29877"
                     /db_xref="MIM:616472"
     CDS             168..3512
                     /gene="UBAP2L"
                     /gene_synonym="NEDLBF; NICE-4; NICE4"
                     /codon_start=1
                     /product="ubiquitin-associated protein 2-like isoform X1"
                     /protein_id="XP_011508517.1"
                     /db_xref="GeneID:9898"
                     /db_xref="HGNC:HGNC:29877"
                     /db_xref="MIM:616472"
                     /translation="MMTSVGTNRARGNWEQPQNQNQTQHKQRPQATAEQIRLAQMISD
                     HNDADFEEKVKQLIDITGKNQDECVIALHDCNGDVNRAINVLLEGNPDTHSWEMVGKK
                     KGVSGQKDGGQTESNEEGKENRDRDRDYSRRRGGPPRRGRGASRGRECMHGALSKPAV
                     VRGQENGLDGTKSGGPSGRGTERGRRGRGRGRGGSGRRGGRFSAQGMGTFNPADYAEP
                     ANTDDNYGNSSGNTWNNTGHFEPDDGTSAWRTATEEWGTEDWNEDLSETKIFTASNVS
                     SVPLPAENVTITAGQRIDLAVLLGKTPSTMENDSSNLDPSQAPSLAQPLVFSNSKQTA
                     ISQPASGNTFSHHSMVSMLGKGFGDVGEAKGGSTTGSQFLEQFKTAQALAQLAAQHSQ
                     SGSTTTSSWDMGSTTQSPSLVQYDLKNPSDSAVHSPFTKRQAFTPSSTMMEVFLQEKS
                     PAVATSTAAPPPPSSPLPSKSTSAPQMSPGSSDNQSSSPQPAQQKLKQQKKKASLTSK
                     IPALAVEMPGSADISGLNLQFGALQFGSEPVLSDYESTPTTSASSSQAPSSLYTSTAS
                     ESSSTISSNQSQESGYQSGPIQSTTYTSQNNAQGPLYEQRSTQTRRYPSSISSSPQKD
                     LTQAKNGFSSVQATQLQTTQSVEGATGSAVKSDSPSTSSIPPLNETVSAASLLTTTNQ
                     HSSSLGGLSHSEEIPNTTTTQHSSTLSTQQNTLSSSTSSGRTSTSTLLHTSVESEANL
                     HSSSSTFSTTSSTVSAPPPVVSVSSSLNSGSSLGLSLGSNSTVTASTRSSVATTSGKA
                     PPNLPPGVPPLLPNPYIMAPGLLHAYPPQVYGYDDLQMLQTRFPLDYYSIPFPTPTTP
                     LTGRDGSLASNPYSGDLTKFGRGDASSPAPATTLAQPQQNQTQTHHTTQQTFLNPALP
                     PGYSYTSLPYYTGVPGLPSTFQYGPAVFPVAPTSSKQHGVNVSVNASATPFQQPSGYG
                     SHGYNTGVSVTSSNTGVPDISGSVYSKTQSFEKQGFHSGTPAASFNLPSALGSGGPIN
                     PATAAAYPPAPFMHILTPHQQPHSQILHHHLQQDGQLPYLQMILCCQRQQEEQTGSGQ
                     RSQTSSIPQKPQTNKSAYNSYSWGAN"
ORIGIN      
        1 aagtgggcgg gggaaggcgc gagagcgagc gcgagaggga aaaggaggga gggggtgggg
       61 aagagggaat cttatatcac gtgacagggg cggcgcggcc cggggtgtca gtgtggagga
      121 gactgagtat tctaccttgt aaatactgtt atttgtatat actgtaaatg atgacatcgg
      181 tgggcactaa ccgagcccgg ggaaactggg aacaacctca aaaccaaaac cagacacagc
      241 acaagcagcg gccacaggcc actgcagaac aaattagact tgcacagatg atttcggacc
      301 ataatgatgc tgactttgag gagaaggtga aacaattgat tgatattaca ggcaagaacc
      361 aggatgaatg tgtgattgct ttgcatgact gcaatggaga tgtcaacaga gctatcaatg
      421 ttcttctgga aggaaaccca gacacgcatt cctgggagat ggtcgggaag aagaagggag
      481 tctcaggcca gaaggatggt ggccagacgg aatccaatga ggaaggcaaa gaaaatcgag
      541 accgggacag agactatagt cggcgacgtg gtgggccacc aagacggggg agaggtgcca
      601 gccgtggacg agagtgtatg catggggctt tatcaaaacc agctgtggtt cgaggtcagg
      661 aaaatggatt ggatggcacc aagagtggag ggccttctgg aagaggaaca gaaagaggca
      721 gaaggggccg tggccgaggc agaggtggct ctggtaggcg aggaggaagg ttttctgctc
      781 aaggaatggg aacctttaac ccagctgatt atgcagagcc agccaatact gatgataact
      841 atggcaatag cagcggcaat acgtggaaca acactggcca ctttgaacca gatgatggga
      901 cgagtgcatg gaggactgca acagaggagt gggggactga agattggaat gaagatcttt
      961 ctgagaccaa gatcttcact gcctctaatg tgtcttcagt gcctctgcct gcggagaatg
     1021 tgacaatcac tgctggtcag agaattgacc ttgctgttct gctggggaag acaccatcta
     1081 caatggagaa tgattcatct aatctggatc cgtctcaggc tccttctctg gcccagcctc
     1141 tggtgttcag taattcgaag cagactgcca tatcacagcc tgcttcaggg aacacatttt
     1201 ctcatcacag tatggtgagc atgttaggga aaggatttgg tgatgtcggt gaagctaaag
     1261 gcggcagtac tacaggctcc cagttcttgg agcaattcaa gactgcccaa gccctggctc
     1321 agttggcagc tcagcattct cagtctggaa gcaccaccac ctcctcttgg gacatgggct
     1381 cgacgacaca atccccatca ctggtgcagt atgatttgaa gaacccaagt gattcagcag
     1441 tgcacagccc ctttacaaag cgccaggctt ttaccccatc ttcaaccatg atggaggtgt
     1501 tccttcagga gaagtcacct gcagtggcta cctccacagc tgcacctcca cctccgtctt
     1561 ctcctctgcc aagcaaatcc acatcggctc cacagatgtc gcctggatct tcagacaacc
     1621 agtcctctag ccctcagccg gctcagcaga aactgaaaca gcagaagaaa aaagcctcct
     1681 tgacttctaa gattcctgct ctggctgtgg agatgcctgg ctcagcagat atctcagggc
     1741 taaacctgca gtttggggca ttgcagtttg ggtcagagcc tgtcctttct gattatgagt
     1801 ccacccccac cacgagcgcc tcttcaagcc aggctccaag tagcctgtat accagcacgg
     1861 ccagtgaatc atcctctaca atttcatcta accagagtca ggagtctggt tatcagagcg
     1921 gcccaattca gtcgacaacc tatacctccc aaaataatgc tcagggccct ctttatgaac
     1981 agagatccac acagactcgg cggtacccca gctccatctc ttcatcaccc caaaaggacc
     2041 tgactcaggc aaagaatggc ttcagttctg tgcaggccac gcagttacag accacacaat
     2101 ctgttgaagg tgctacaggc tctgcagtga aatctgattc accttccact tctagcatcc
     2161 cccctctcaa tgaaacggta tctgcagctt ccttactgac gacaaccaat cagcattcat
     2221 cctccttggg tggcttgagc cacagtgagg agattccaaa tactaccacc acacaacaca
     2281 gcagcacgtt atctacgcag cagaataccc tttcatcatc aacatcttct gggcgcactt
     2341 cgacatccac tcttttgcac acaagtgtgg agagtgaggc gaatctccat tcttcctcca
     2401 gcactttttc caccacatcc agcacagtct ctgcacctcc cccagtggtc agtgtctcct
     2461 ccagtctcaa tagtggcagt agcctgggcc tcagcctagg cagcaactcc actgtcacag
     2521 cctcgactcg aagctcagtt gctacgactt caggaaaagc tcctcccaac ctccctcctg
     2581 gggtcccgcc gttgttgcct aatccgtata ttatggctcc agggctgtta catgcctacc
     2641 cgccacaagt atatggttat gatgacttgc agatgcttca gacaagattt ccattggatt
     2701 actacagcat cccatttccc acacccacta ctccgctgac tgggagggat ggtagcctgg
     2761 ccagcaaccc ttattctggt gacctcacaa agttcggccg tggggatgcc tcctccccag
     2821 ccccggccac aaccttggcc caaccccaac agaaccagac gcagactcac cataccacgc
     2881 agcagacatt cctgaacccg gcgctgcctc ctggctacag ttacaccagc ctgccatact
     2941 atacaggggt cccgggcctc cccagcacct tccagtatgg gcctgctgtg ttccctgtgg
     3001 ctcctacctc ttccaagcag catggtgtga atgtcagtgt gaatgcatcg gccacccctt
     3061 tccaacagcc gagtggatat gggtctcatg gatacaacac tggtgtttca gtcacctcca
     3121 gtaacacggg cgtgccagat atctcgggtt ctgtgtactc caaaacccag tcctttgaga
     3181 aacaaggttt tcattccggt actcctgctg cttccttcaa cttgccttca gccctaggaa
     3241 gtgggggccc catcaatccg gccacagctg ctgcctaccc acctgccccc tttatgcaca
     3301 ttctgacccc ccatcagcag ccgcattctc agatccttca ccatcacctg cagcaggatg
     3361 gccagctacc atatttgcag atgattctct gttgccagcg ccagcaggag gagcagacgg
     3421 gcagcgggca acgtagccag accagctcca tcccgcagaa gccccagacc aacaagtctg
     3481 cctacaacag ctacagctgg ggggccaact gaggccctga ccctcttctc ccggtcccat
     3541 cttctgagag ggcttctcag cctggaaact atggaaacag catcaaagag aaaggaatgt
     3601 ggggggtttc cgctgccccc cacccccagc ggcccacccc atgcctcagc ttcatgtctg
     3661 tcccattcct ataccatccc caccctgttg tatgtattat aggatttgta ttttctcctt
     3721 ttttttcccc cttccattcc ttctcccctc ttgcattcaa gattatgaaa ctttgctatg
     3781 ggccctgcac ttcctttgct tcctcctgtt caccctggtg gtgtacggat gaggcgggga
     3841 ggtgggaccc ccaaacatat atcagcccaa cagccctaag tctccttctt tattattagg
     3901 aaaacaacaa caacaacaaa caaaaaaatg gcgtcatgaa tatgaacagc attgtcagat
     3961 gaattagttg aagtggtttt ttttttgttt tttttttttt tttgtactgt gtcctcaaat
     4021 ttaatggatt aatgtgtctt gtatatataa aaagaaaacc tcta
//
