LOCUS       XM_006722392            1388 bp    mRNA    linear   PRI 25-AUG-2024
DEFINITION  PREDICTED: Homo sapiens tetratricopeptide repeat domain 39C
            (TTC39C), transcript variant X5, mRNA.
ACCESSION   XM_006722392
VERSION     XM_006722392.4
DBLINK      BioProject: PRJNA168
KEYWORDS    RefSeq.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000018.10) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 5, 2022 this sequence version replaced XM_006722392.3.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001405.40-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/23/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1388
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /chromosome="18"
     gene            1..1388
                     /gene="TTC39C"
                     /gene_synonym="C18orf17; HsT2697"
                     /note="tetratricopeptide repeat domain 39C; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 5 ESTs, 32 long SRA reads, and 100% coverage of the
                     annotated genomic feature by RNAseq alignments, including
                     9 samples with support for all annotated introns"
                     /db_xref="GeneID:125488"
                     /db_xref="HGNC:HGNC:26595"
     CDS             119..1108
                     /gene="TTC39C"
                     /gene_synonym="C18orf17; HsT2697"
                     /codon_start=1
                     /product="tetratricopeptide repeat protein 39C isoform X4"
                     /protein_id="XP_006722455.1"
                     /db_xref="GeneID:125488"
                     /db_xref="HGNC:HGNC:26595"
                     /translation="MAGSEQQRPRRRDDGDSDAAAAAAAPLQDAELALAGINMLLNNG
                     FRESDQLFKQYRNHSPLMSFGASFVSFLNAMMTFEEEKMQLACDDLKTTEKLCESEEA
                     GVIETIKNKIKKNVDVRKSAPSMVDRLQRQIIIADCQVYLAVLSFVKQELSAYIKGGW
                     ILRKAWKIYNKCYLDINALQELYQKKLTEESLTSDAANDNHIVAEGVSEESLNRLKGA
                     VSFGYGLFHLCISMVPPNLLKIINLLGFPGDRLQGLSSLMYASESKDMKAPLATLALL
                     WYHTVVRPFFALDGSDNKAGLDEAKEILLKKEAAYPNSSLFMFFKGRIQRLEK"
     polyA_site      1388
                     /gene="TTC39C"
                     /gene_synonym="C18orf17; HsT2697"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 cccctcccct cccggctccg cttggctccg ggcaggtaga gccgggctcc gggcgcgcgc
       61 ggggccgcag cagctgctcc cgatctcgcc tcggcccagc gcagggcctc gcacgcccat
      121 ggccggctcg gagcagcagc ggccgcggcg gcgggacgac ggagactcgg acgcggcagc
      181 ggcggcggcg gcgcccctgc aggacgcgga gctggccctg gccggcatca acatgctgct
      241 caacaacggc ttcagggagt cggaccagct tttcaaacaa tacagaaatc atagcccact
      301 aatgagtttt ggagccagct ttgtcagttt tttgaatgcc atgatgacat ttgaggaaga
      361 aaaaatgcag ttggcatgtg atgacttaaa aaccacagaa aaactgtgtg aaagtgaaga
      421 ggctggagta attgaaacaa tcaagaataa aattaagaag aacgttgatg tccgaaaatc
      481 cgccccctct atggttgatc ggcttcagag gcagataatc atagctgact gccaggttta
      541 cctggctgtg ctttcatttg taaaacaaga attgtcagct tatatcaaag gtgggtggat
      601 ccttaggaaa gcctggaaga tttacaataa atgctatctg gacatcaatg cccttcagga
      661 gctgtatcag aagaagctaa ctgaagagtc cttgacttct gatgctgcaa atgataatca
      721 cattgtggct gaaggggtgt ctgaggagtc tctgaacaga ctgaaaggtg ctgttagctt
      781 tggatatggc ctttttcacc tttgcatatc catggtgccc ccaaacctgc tcaaaatcat
      841 caacctgctg ggttttcctg gagaccgcct acaggggctt tcttcactga tgtatgcaag
      901 cgaaagtaag gacatgaagg cccctttagc tacattagct ctgctctggt atcatactgt
      961 agtccgcccg ttttttgcct tggatggcag tgataacaag gcaggcctgg atgaagctaa
     1021 ggaaattctc cttaaaaaag aagctgctta tccaaattct tccctcttta tgtttttcaa
     1081 gggacggata caacgactag agaaatgatg ttggttatca aggactattt acttttcttg
     1141 tggcacctaa atgtgtttct gaagtcagtt ccaaagaaga agttgtaaaa atgtcttgat
     1201 aattgaaata agaagatgat ctcctaagaa ggggaccaaa tcagctattt aaattccagt
     1261 atgctggcta aacaatcagt ttcatttctt gagagtcaca tttttatttc aaagatggga
     1321 ttataaagaa ctgaattaaa tttaattgaa gtaaaaaagt aaatacatta aatgaacttt
     1381 atctgtta
//
