LOCUS       XM_047441479            5170 bp    mRNA    linear   PRI 25-AUG-2024
DEFINITION  PREDICTED: Homo sapiens translocator protein (TSPO), transcript
            variant X1, mRNA.
ACCESSION   XM_047441479
VERSION     XM_047441479.1
DBLINK      BioProject: PRJNA168
KEYWORDS    RefSeq.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000022.11) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001405.40-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/23/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5170
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /chromosome="22"
     gene            1..5170
                     /gene="TSPO"
                     /gene_synonym="BPBS; BZRP; DBI; IBP; MBR; mDRC; PBR; PBS;
                     pk18; PKBS; PTBR; TSPO1"
                     /note="translocator protein; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 7
                     mRNAs, 44 ESTs, 897 long SRA reads, 7 Proteins, and 83%
                     coverage of the annotated genomic feature by RNAseq
                     alignments, including 22 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:706"
                     /db_xref="HGNC:HGNC:1158"
                     /db_xref="MIM:109610"
     CDS             4410..4919
                     /gene="TSPO"
                     /gene_synonym="BPBS; BZRP; DBI; IBP; MBR; mDRC; PBR; PBS;
                     pk18; PKBS; PTBR; TSPO1"
                     /codon_start=1
                     /product="translocator protein isoform X1"
                     /protein_id="XP_047297435.1"
                     /db_xref="GeneID:706"
                     /db_xref="HGNC:HGNC:1158"
                     /db_xref="MIM:109610"
                     /translation="MAPPWVPAMGFTLAPSLGCFVGSRFVHGEGLRWYAGLQKPSWHP
                     PHWVLGPVWGTLYSAMGYGSYLVWKELGGFTEKAVVPLGLYTGQLALNWAWPPIFFGA
                     RQMGWALVDLLLVSGAAAATTVAWYQVSPLAARLLYPYLAWLAFTTTLNYCVWRDNHG
                     WRGGRRLPE"
ORIGIN      
        1 aactcctgcc aggcagtgcc cttcccggag cgtgccctcg ccgctggtga gtgaggacgg
       61 gacgcggagg gggcagcggg aagtgggggc ccgcatggct gcgactcttg gcagcgccgc
      121 gggacagagg gaaactgagg ccggagccgc agactggaca cccgaggggg cgacccgggg
      181 cagcacttgg ggctcggcta ccgggtcagg gggcggcggg cagcagagtc tgggcctccg
      241 cggccggggt tccagcgcgg gccgcctccg gctgggggtt cgggagggaa aacttggaca
      301 accctgccac gcccagccct tggccgcgtg gcttctcctg caggaagcgc ggtcccagga
      361 gtggccgacg ctccctctcc tgcccattcc gcggatgggc aatcccaggc ggaactccct
      421 tgagggtctc agaatatctg ggagacctcg ggctcttgat ctccgagaca ccccgtttcg
      481 tagtggagaa cagtccagat cggggaagtt tattttgccc aaagccggtt agaggccccc
      541 tggccctcga ttcccagtgc ggggctcagg tgcgttgcag cctagacggg tcttactgtg
      601 agccgagcag cctctgggac ctgtctgctt cccctacccc ttgcaaagaa gccggagccc
      661 aggtaggaga agcgggggct tcctgctgtg aacgcgctgc tggccagggc agctgccaga
      721 ggccatggcc tggcgtgggc ctggagcccc tctggccagc ctgccagggg ccagggctac
      781 gggataccag cagcgtgccc tgggctggat ggcaggagag acaggacttg aggctgtccc
      841 agaatgggct caggcagggc gaggatatca ggggaggtgg tgtacaggaa gcagccgccc
      901 agcttgcctg gcacacagca agccctgccc atgaaggcct actgccagaa cagtgggcga
      961 ggcccggcgt ctctgtggag tcggtggggc ccgggacagg gcagcctgag gcaggtttcc
     1021 actggcggtg aaaggggccg tgtggcaagg acaggagagc cagcctcagc ccagcagggg
     1081 aaggcggccc ctgagtctcc acctggctgc tggcagcccc acagggaggt tcggcgaaac
     1141 tgaggcttgc caaagaagcc tttgtccaga gtcacgcagc tggcgcggtg gagccagggc
     1201 cagaacccgt gcaggctgat cccagcctgc cttctccact gtgccccgag gaccactttc
     1261 tttcctggga gtgtgtgtgt gcacatgtgc tgtgtcctgt cgtctgtaca cacttgtgcc
     1321 tggcgtgagg caggatgtct ggctggatct accagaaagt attcacagcg ggttctccag
     1381 ctggggtgag gggcttgggc tcgcagggag ggagcctact tttcacttta gcttgctttc
     1441 ttcctttctt ccgtccttcc ttcctccctc cctcccctcc ccttcccacc ccttctttct
     1501 ctttcttctt tctctttctt tctttctttc cttccttcct tctttccttt ctctttctct
     1561 ttttttcttt cttccccttc cttccttcct ttcttgtttt tgtttgtttg tttgagacag
     1621 ggtctcactc tggtatgcag gctggagtgc agtgatgcaa tcatagctca ctgcagtctc
     1681 ctgcagaact cctgggctca agcgatcctc ccacctcagc ctcccaaagt gctgggatta
     1741 caggcatgag ccactgttcc tggcttattt gtgttttctt tttttttttt tttttttttt
     1801 ttttgagacg gagtctcgct ctgtcgccca ggccggactg cggactgcag tggcgcaatc
     1861 tcggctcact gcaagctccg cttcccgggt tcacgccatt ctcctgcctc agcctcccga
     1921 gtagctggga ctacaggcgc ctgccaccgc gcccggctaa ttttttgtat ttttagtaga
     1981 gacggggttt caccttgtta gccaggatgg tctcgatctc ctgacctcat gatccacccg
     2041 cctcggcctc ccaaagtgct gggattacag gcgtgagcca ccgcgcccgg cttatttgtg
     2101 ttttctttac ttttgatggt gcaaacaatg cttggatgtg ctctctgttt aaaacggtag
     2161 tcttttttat tttttttttt aaccactaga ccactaggga agtcattctt aatttcttat
     2221 ttttatttat atatatattt tttgagacgg tgtctcgctc cattgcccag gctggagtgc
     2281 agtggctcca gctgggctca ctgcaacctc cgcctccaga gttgaagtga ttctcctgcc
     2341 tcagcctggc taatttttat atttttagta gagatgggtt tcaccatgtc ggccaggctg
     2401 tttctttatt ttttactaaa aaaaagttta acccccgaac ctcgaaggaa agggaagtag
     2461 tctttcttaa cagaaccaat tccccctgga taccccaccc tcaccctacc ctctcccagg
     2521 ccactcgatg gccaggttcg ctgtggattt ttccagacct gtgggctgtt tcactggtta
     2581 cttttgtaat gaaaaatgca cacaaaggtt acgatgagga cgattagcca tgaatcattt
     2641 ttaaaaagcc tgaaaacaag tccctgggac agtgctggct tcgttggaga gacaaggctc
     2701 aggggagtgg gtgcagctgg gggtcggggt ggggatcaga gaagggacac attccttatt
     2761 gtgtttctgg gtcgccttct ttttttttgt ttgctttatt tatttattta tttattttga
     2821 gacagagtct tgctctgttg cccaggctgg agtgcagtgg cgtaatcttg gctcactgca
     2881 acctcctcct ctcgggttca agcaattctc ttgccttagc cttctgagta gctgggatta
     2941 cagacgtgcg ccaccacacc aggctagttt tttattttta gtagagacgg ggtctcacca
     3001 tgttggccag gctggtctcg aactcctgac ctgaggtgat ctgcctgcct cagcctccca
     3061 aagtgctgag attacaggtg tgagccaccg ttcctggcct tctgggtcac ctatagggag
     3121 gtctccaaga acagaaagac accctgaaac ccactggctc gaccaccacc tcatagatgg
     3181 ggacacagag gctcaggaga tgagatacct tggggcagcg atgggtctgg ggtcttcggg
     3241 ccaggagtga agcctcacaa gacctggaga ccctgggtcc caccctcagt ggggaagggc
     3301 tcagattctg cagggcccga tgctctgtgg gggctgggat gttgccgcgg caggtggaga
     3361 gagtgatgct actggccctg agagaacctt ctggcaccgt tcagaggtgg ggtggagtgg
     3421 cctgcgggtc caatcctggc gccgcaggct ctatgagccc tgtttcagat gaggaaggag
     3481 gctgagacgg gcggtgacac aactcctggc aagtggtcac gcggcccaga gcagcccggc
     3541 agacacccag ctcaaaggga ggggtggggt gggttttgga gtcactcgga cctagaaagt
     3601 tctgtgactt ctcatgtctc agtttcctca tctggaaaat gggaccagtc acgagtccac
     3661 catggaggcc gagtgggccg tgtggctcag ggagaagcag ctggtcccct gtggctgctg
     3721 tggggactga acaaggcggt gaccgtcggg atgagcacgg actccaccac gcaggcccct
     3781 gcctaccaga ggcctgtgca caaccagagc tgagcaaggc ttggaacctt ctcctgcctc
     3841 tacgtcctgc gccctctacc ctgccccgat cttgcccctg ttttgggggc gctgctccgt
     3901 gcagggcatt ttcacctgtg gagtgtccag gggctctcgt ggctgataag gtctcgtcac
     3961 aggtccaagc cttgaggccc tgtcttcccc tggaggaaat ggggctagtg gccccacact
     4021 gatacccaca acccctctct tctctggagt tttcagggaa acgttgttgt cccacccctt
     4081 cctcccttga gctaccccag ccccccaaga agcagacaca gcgggtttac ccacctgacg
     4141 ttggaggaag ccaggcccag agacgagcct tggatggagg cagagccgag gtctggatcc
     4201 cgattcgctt tctgaaggag acaaataaag ggtgtatagg tggcttcacc cctctgcctg
     4261 agcctgagtc ctgtccctgc catgtgtgcc ccctggcctg gcccacccca gctttccctg
     4321 gactcatccc agagcagata tctggatcct gcctagcctg gctcagcatg actcatcatg
     4381 agctcccctg aacagcagct gcagcagcca tggccccgcc ctgggtgccc gccatgggct
     4441 tcacgctggc gcccagcctg gggtgcttcg tgggctcccg ctttgtccac ggcgagggtc
     4501 tccgctggta cgccggcctg cagaagccct cgtggcaccc gccccactgg gtgctgggcc
     4561 ctgtctgggg cacgctctac tcagccatgg ggtacggctc ctacctggtc tggaaagagc
     4621 tgggaggctt cacagagaag gctgtggttc ccctgggcct ctacactggg cagctggccc
     4681 tgaactgggc atggcccccc atcttctttg gtgcccgaca aatgggctgg gccttggtgg
     4741 atctcctgct ggtcagtggg gcggcggcag ccactaccgt ggcctggtac caggtgagcc
     4801 cgctggccgc ccgcctgctc tacccctacc tggcctggct ggccttcacg accacactca
     4861 actactgcgt atggcgggac aaccatggct ggcgtggggg acggcggctg ccagagtgag
     4921 tgcccggccc accagggact gcagctgcac cagcaggtgc catcacgctt gtgatgtggt
     4981 ggccgtcacg ctttcatgac cactgggcct gctagtctgt cagggccttg gcccaggggt
     5041 cagcagagct tcagaggtgg ccccacctga gcccccaccc gggagcagtg tcctgtgctt
     5101 tctgcatgct tagagcatgt tcttggaaca tggaatttta taagctgaat aaagtttttg
     5161 acttccttta
//
