LOCUS       XM_047428126            4467 bp    mRNA    linear   PRI 25-AUG-2024
DEFINITION  PREDICTED: Homo sapiens tetraspanin 9 (TSPAN9), transcript variant
            X3, mRNA.
ACCESSION   XM_047428126
VERSION     XM_047428126.1
DBLINK      BioProject: PRJNA168
KEYWORDS    RefSeq.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000012.12) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001405.40-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/23/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4467
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /chromosome="12"
     gene            1..4467
                     /gene="TSPAN9"
                     /gene_synonym="NET-5; NET5; PP1057"
                     /note="tetraspanin 9; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 2 mRNAs, 29 ESTs, 525
                     long SRA reads, 7 Proteins, and 100% coverage of the
                     annotated genomic feature by RNAseq alignments, including
                     13 samples with support for all annotated introns"
                     /db_xref="GeneID:10867"
                     /db_xref="HGNC:HGNC:21640"
                     /db_xref="MIM:613137"
     CDS             305..1024
                     /gene="TSPAN9"
                     /gene_synonym="NET-5; NET5; PP1057"
                     /codon_start=1
                     /product="tetraspanin-9 isoform X2"
                     /protein_id="XP_047284082.1"
                     /db_xref="GeneID:10867"
                     /db_xref="HGNC:HGNC:21640"
                     /db_xref="MIM:613137"
                     /translation="MARGCLCCLKYMMFLFNLIFWLCGCGLLGVGIWLSVSQGNFATF
                     SPSFPSLSAANLVIAIGTIVMVTGFLGCLGAIKENKCLLLSFFIVLLVILLAELILLI
                     LFFVYMDKVNENAKKDLKEGLLLYHTENNVGLKNAWNIIQAEMRCCGVTDYTDWYPVL
                     GENTVPDRCCMENSQGCGRNATTPLWRTGCYEKVKMWFDDNKHVLGTVGMCILIMQIL
                     GMAFSMTLFQHIHRTGKKYDA"
ORIGIN      
        1 aggagagact ggaagacagg gagggagtga acctgtgaac atcttggggt ggtgcctcct
       61 ggggcagcgg gagtaggagg tgggagcaca tgaggcctgt tcaaggctgg tacagctgga
      121 ggggagtgag caaggggaag gtcatgggat ttggattatc taggccatct taggggcttt
      181 agctcttatg gcagaagaga tgggagccat ggagggcttt gagcaaagga gtgggagagc
      241 tggcatacat ttcaaaagga ttgctgtggc tgctcggtag aaaatcgaat ttaagaagtg
      301 caacatggcc aggggctgcc tctgctgctt gaagtacatg atgttcctct tcaatttgat
      361 attctggctc tgtggctgtg ggctgctggg agtgggcatc tggctctccg tgtcccaagg
      421 caactttgcc accttctccc ccagcttccc ttcgttgtct gcagccaacc tggtcattgc
      481 cataggcacc attgtcatgg tgacgggctt cctcggctgc ctgggggcca tcaaggaaaa
      541 caagtgcctc ctcctcagct ttttcatcgt cctgttggtc atcctcctag cagagctgat
      601 cttactcatc ctcttctttg tctacatgga caaggtgaac gagaacgcca agaaggacct
      661 gaaggaaggc ctgctgctgt accacaccga gaacaacgtg gggctgaaga acgcctggaa
      721 catcatccag gctgagatgc gatgctgtgg tgtcactgac tacacagact ggtacccagt
      781 gctgggggag aacacggttc ccgaccgctg ctgcatggag aactcccagg gctgcgggcg
      841 caacgccacc acgcctttgt ggagaacggg ctgctatgaa aaggtgaaga tgtggttcga
      901 tgacaataag cacgtgctgg gcacggtggg gatgtgcatc ctcatcatgc agatcctggg
      961 catggccttc tccatgaccc tcttccagca catccaccgg actggtaaga agtacgacgc
     1021 atgagcgggc tggccgggag tgcccacccc gccctgctgc cctgtggagg gaagaggatt
     1081 gagctttgtg tcacctgcct gcgctctcca gatatgaccc ctgcacccac cccccacagc
     1141 ctgccctacc ccacctaccc tgcctcagcc tcggacttct cagtgggtgg agtgccaggg
     1201 aggaggaggc acacggagac ctggggctcg gggcccctgg attcctgcat ctgcatatgc
     1261 gtatttgcca aagacgacag ggtgggctgg ggtgcgctcc ggaggaaccc ccggcactga
     1321 tgggcttctg cccctgccct tcctcacact gacactttgt ccccacatgg ggtggggagc
     1381 agagtgcccg ccccgtggag ataccgcccc agcgggggct gcgacatcca tggccaccat
     1441 ggggcacctg gcggggcggg ggtctgccgg cctctgggca aggcccctgg agcatctcgc
     1501 ccaggctttt tataccttac aatgtaactt ttttatttta ttttactcta tgattattca
     1561 ggaatattat ctctcagata agtttagggt tagatttctg atttgtaact ttttactgtg
     1621 ttgatttctt taatggtttg actttttttc cctgagggtg agggatgggt gggaagagag
     1681 gacatctgtc cagtctcaat caggacagac caccgtgcga cacccaggag gctctcggat
     1741 ggggcgcgcc tgcgccctca gaacgtgtgg gaaggagggg gcgtggacag gacacgggac
     1801 cttgccaggc ctggtgtctg aggacaggag cctgggagag gcgggtggag cgtgaagcag
     1861 gctggaggtg cccctgcacg ggaggtggcg tttgctaacc aatcgagctg gaaatgccag
     1921 ggcagggggg ccccacggtg ctgtggcaga gctagagggg tccttagact tttcactgat
     1981 gagcagttgt tggttttttc tttctccctt cctcccgctc tctgctggca cgcgaggctt
     2041 ccccttccac cccatgtggg tattcccaca acaggttctg cacaccccag ttatttcaca
     2101 gacattcctg ctagaaactg tcagacaaat acctctctag ttcggatgct gctcactttc
     2161 ccccttgctt ctggaagggg aagcagtcct taggttttgc tgtgctggga cagtggcagg
     2221 ggacccacag gggtgaggac ccacggtcct ccccgccagc cttgctcagc tgtgggttgc
     2281 cctgctggga aggagggaat cacgtccacc tgggtcccaa gatcttcgcc tccttccctg
     2341 gggccacgga catcagcagt gggttgggtg gcgattatat catctgtgat cccaaggaga
     2401 agaaatacag aaaacccaag agaggtcaga ctggctcttg ttaccggagc cacgggaaga
     2461 aagcagccgg agtcacgcac gtgcagagct gggcatggga gagaaacggg ctggggagtg
     2521 aggccaggag tgggattcag ctgcagcagg gcgccccctc caaactgcag ctggtctggc
     2581 ttactgtttt gccgttcaaa aaggtcgcga atccgtggga ctgagcacgg ggacctcacc
     2641 cgctagccag cgtctgctgc acttgatcag gtggggcctt ggtgggcggc tgcctttcct
     2701 atacagtttg tcttgtcacc ctggtttccc actggggcca ggtctcttct ccagcctcca
     2761 cctgcctgtc tgatccaaga gctgagacac ggccacccag caccagtcac tcctctgttc
     2821 accttaagta acacacaaat cgggaacagg aggacagaac cgttggcatt atcaggattc
     2881 gtgttttgtg ggggtgggag tggagagtag ggtggtcttg tgagttgtgc agggtgaaga
     2941 ccgcttccct gagacagggg cagtggtgct gatggaatgt gggggaggcc cacatttgag
     3001 caaagctgcc ctgcccttgt cccctggcct ggcttcctgg taaggagttt cagccgcctc
     3061 cgcaggaacc cccaaagtgc agattccgga gcagacacat ccgggcggag agactcagca
     3121 gacaagtgct gcagttgcac ggtgggaccc ggggcctcgt gcgttttttg ctgtgggtgg
     3181 ggtgggtggg ttggtttatg cctatcaatg caatttttaa tttttgttaa tatcaacagc
     3241 aaaagcctag tgcattggga gatgtgcaac ctccctgaaa atcttttctg tttctggagt
     3301 acttcagggg tggcctctgg ccccagagcc tttgccacag tgctcccacc agcccccacc
     3361 tcatccgtct gtttgcagag cctcatctac aggtccccac gctgccttct ttactcactc
     3421 tgcgcttggc cgttttgtta tttggcttag tctacattgg gcggaagtct gtgtgcacag
     3481 agtgggtgtt ccttcgagcc ccttccactc agagggccac acccagcgat gccagtgaag
     3541 gtggcacagc ctctcttcag tttctcctga ctgtgatctc actggggtag aattcccctg
     3601 agagaattcc ctcactcacg gctccctttg ccagagtcag ttcaatcagg tctgatgtga
     3661 gcaatttaca cacttgtctc agaaagtccc tcagggtttg tagaggactg caggggggca
     3721 tccgctgcag actcagcctt tctctgcagc catcctgcag tgggggtgag cgggcacagg
     3781 ctgagaactg ctcttgggtg gtggaagcag gtgtcacggt gcaagtctcc ccctgcaccc
     3841 ctcccccagc ttgagccgtg tcacccccct ctccctccag catgggcctg tgtctcaggc
     3901 tctctggaag gtggccctgc cccggaccct cttgcaggtg tcctggtttg acttggaact
     3961 agatggccat ctttccaggc tttggtggcc caagagcagt ctgggtggat ggaagtggct
     4021 gtcccctcct ctccagcccc tgcccaccca ctggtggagg tgctaactag cagggacgtg
     4081 gcataggatg ggagctgggc gtgaggtgct tggggtccat tctttgtccc tcagcttctc
     4141 agagtccggc cagcccttgt gttcccgtgc cccacacttt cctcctcccc actgcagtga
     4201 gtcaatagtc cagggtgggg cctggcctcc ctgccctgat tggggactca ggaggtgagg
     4261 cctggggggc ttcctgcccc ctccttgccc acctgcctgc ccccgggcag cacgggaggg
     4321 agagcagggt gagcacgctt gttggtttca gatgcacttt ctgcttgcat tgccgtatct
     4381 gtgcgttcct tcatcctggt cctggcttta tggaacacca tgtttttagc atgtttttaa
     4441 ataaaaacgg ataaagtgtc aaaagca
//
