LOCUS       XM_047428125            4453 bp    mRNA    linear   PRI 25-AUG-2024
DEFINITION  PREDICTED: Homo sapiens tetraspanin 9 (TSPAN9), transcript variant
            X2, mRNA.
ACCESSION   XM_047428125
VERSION     XM_047428125.1
DBLINK      BioProject: PRJNA168
KEYWORDS    RefSeq.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000012.12) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001405.40-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/23/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4453
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /chromosome="12"
     gene            1..4453
                     /gene="TSPAN9"
                     /gene_synonym="NET-5; NET5; PP1057"
                     /note="tetraspanin 9; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 2 mRNAs, 29 ESTs, 508
                     long SRA reads, 7 Proteins, and 100% coverage of the
                     annotated genomic feature by RNAseq alignments, including
                     2 samples with support for all annotated introns"
                     /db_xref="GeneID:10867"
                     /db_xref="HGNC:HGNC:21640"
                     /db_xref="MIM:613137"
     CDS             291..1010
                     /gene="TSPAN9"
                     /gene_synonym="NET-5; NET5; PP1057"
                     /codon_start=1
                     /product="tetraspanin-9 isoform X2"
                     /protein_id="XP_047284081.1"
                     /db_xref="GeneID:10867"
                     /db_xref="HGNC:HGNC:21640"
                     /db_xref="MIM:613137"
                     /translation="MARGCLCCLKYMMFLFNLIFWLCGCGLLGVGIWLSVSQGNFATF
                     SPSFPSLSAANLVIAIGTIVMVTGFLGCLGAIKENKCLLLSFFIVLLVILLAELILLI
                     LFFVYMDKVNENAKKDLKEGLLLYHTENNVGLKNAWNIIQAEMRCCGVTDYTDWYPVL
                     GENTVPDRCCMENSQGCGRNATTPLWRTGCYEKVKMWFDDNKHVLGTVGMCILIMQIL
                     GMAFSMTLFQHIHRTGKKYDA"
ORIGIN      
        1 gtttccgctg gcggcggcgg cggcggcggt gccggagcgc gagcagagcg gagaccccca
       61 ggtcctgcgg gcgcggaata tcctggaacc ttcttttgtt tgtcagcagc caaggtgttt
      121 ccaggaagtt cagagagaac aggtcactct gtcgccgtag accgtagttc ttgttctgta
      181 aaacaagtgg ttggaccggc tgcatcgaag gtttcatcca ggtgcgagtg ctgggatgtt
      241 gctgttgtcc tctctcattt gtggcacaac ggtaatttaa gaagtgcaac atggccaggg
      301 gctgcctctg ctgcttgaag tacatgatgt tcctcttcaa tttgatattc tggctctgtg
      361 gctgtgggct gctgggagtg ggcatctggc tctccgtgtc ccaaggcaac tttgccacct
      421 tctcccccag cttcccttcg ttgtctgcag ccaacctggt cattgccata ggcaccattg
      481 tcatggtgac gggcttcctc ggctgcctgg gggccatcaa ggaaaacaag tgcctcctcc
      541 tcagcttttt catcgtcctg ttggtcatcc tcctagcaga gctgatctta ctcatcctct
      601 tctttgtcta catggacaag gtgaacgaga acgccaagaa ggacctgaag gaaggcctgc
      661 tgctgtacca caccgagaac aacgtggggc tgaagaacgc ctggaacatc atccaggctg
      721 agatgcgatg ctgtggtgtc actgactaca cagactggta cccagtgctg ggggagaaca
      781 cggttcccga ccgctgctgc atggagaact cccagggctg cgggcgcaac gccaccacgc
      841 ctttgtggag aacgggctgc tatgaaaagg tgaagatgtg gttcgatgac aataagcacg
      901 tgctgggcac ggtggggatg tgcatcctca tcatgcagat cctgggcatg gccttctcca
      961 tgaccctctt ccagcacatc caccggactg gtaagaagta cgacgcatga gcgggctggc
     1021 cgggagtgcc caccccgccc tgctgccctg tggagggaag aggattgagc tttgtgtcac
     1081 ctgcctgcgc tctccagata tgacccctgc acccaccccc cacagcctgc cctaccccac
     1141 ctaccctgcc tcagcctcgg acttctcagt gggtggagtg ccagggagga ggaggcacac
     1201 ggagacctgg ggctcggggc ccctggattc ctgcatctgc atatgcgtat ttgccaaaga
     1261 cgacagggtg ggctggggtg cgctccggag gaacccccgg cactgatggg cttctgcccc
     1321 tgcccttcct cacactgaca ctttgtcccc acatggggtg gggagcagag tgcccgcccc
     1381 gtggagatac cgccccagcg ggggctgcga catccatggc caccatgggg cacctggcgg
     1441 ggcgggggtc tgccggcctc tgggcaaggc ccctggagca tctcgcccag gctttttata
     1501 ccttacaatg taactttttt attttatttt actctatgat tattcaggaa tattatctct
     1561 cagataagtt tagggttaga tttctgattt gtaacttttt actgtgttga tttctttaat
     1621 ggtttgactt tttttccctg agggtgaggg atgggtggga agagaggaca tctgtccagt
     1681 ctcaatcagg acagaccacc gtgcgacacc caggaggctc tcggatgggg cgcgcctgcg
     1741 ccctcagaac gtgtgggaag gagggggcgt ggacaggaca cgggaccttg ccaggcctgg
     1801 tgtctgagga caggagcctg ggagaggcgg gtggagcgtg aagcaggctg gaggtgcccc
     1861 tgcacgggag gtggcgtttg ctaaccaatc gagctggaaa tgccagggca ggggggcccc
     1921 acggtgctgt ggcagagcta gaggggtcct tagacttttc actgatgagc agttgttggt
     1981 tttttctttc tcccttcctc ccgctctctg ctggcacgcg aggcttcccc ttccacccca
     2041 tgtgggtatt cccacaacag gttctgcaca ccccagttat ttcacagaca ttcctgctag
     2101 aaactgtcag acaaatacct ctctagttcg gatgctgctc actttccccc ttgcttctgg
     2161 aaggggaagc agtccttagg ttttgctgtg ctgggacagt ggcaggggac ccacaggggt
     2221 gaggacccac ggtcctcccc gccagccttg ctcagctgtg ggttgccctg ctgggaagga
     2281 gggaatcacg tccacctggg tcccaagatc ttcgcctcct tccctggggc cacggacatc
     2341 agcagtgggt tgggtggcga ttatatcatc tgtgatccca aggagaagaa atacagaaaa
     2401 cccaagagag gtcagactgg ctcttgttac cggagccacg ggaagaaagc agccggagtc
     2461 acgcacgtgc agagctgggc atgggagaga aacgggctgg ggagtgaggc caggagtggg
     2521 attcagctgc agcagggcgc cccctccaaa ctgcagctgg tctggcttac tgttttgccg
     2581 ttcaaaaagg tcgcgaatcc gtgggactga gcacggggac ctcacccgct agccagcgtc
     2641 tgctgcactt gatcaggtgg ggccttggtg ggcggctgcc tttcctatac agtttgtctt
     2701 gtcaccctgg tttcccactg gggccaggtc tcttctccag cctccacctg cctgtctgat
     2761 ccaagagctg agacacggcc acccagcacc agtcactcct ctgttcacct taagtaacac
     2821 acaaatcggg aacaggagga cagaaccgtt ggcattatca ggattcgtgt tttgtggggg
     2881 tgggagtgga gagtagggtg gtcttgtgag ttgtgcaggg tgaagaccgc ttccctgaga
     2941 caggggcagt ggtgctgatg gaatgtgggg gaggcccaca tttgagcaaa gctgccctgc
     3001 ccttgtcccc tggcctggct tcctggtaag gagtttcagc cgcctccgca ggaaccccca
     3061 aagtgcagat tccggagcag acacatccgg gcggagagac tcagcagaca agtgctgcag
     3121 ttgcacggtg ggacccgggg cctcgtgcgt tttttgctgt gggtggggtg ggtgggttgg
     3181 tttatgccta tcaatgcaat ttttaatttt tgttaatatc aacagcaaaa gcctagtgca
     3241 ttgggagatg tgcaacctcc ctgaaaatct tttctgtttc tggagtactt caggggtggc
     3301 ctctggcccc agagcctttg ccacagtgct cccaccagcc cccacctcat ccgtctgttt
     3361 gcagagcctc atctacaggt ccccacgctg ccttctttac tcactctgcg cttggccgtt
     3421 ttgttatttg gcttagtcta cattgggcgg aagtctgtgt gcacagagtg ggtgttcctt
     3481 cgagcccctt ccactcagag ggccacaccc agcgatgcca gtgaaggtgg cacagcctct
     3541 cttcagtttc tcctgactgt gatctcactg gggtagaatt cccctgagag aattccctca
     3601 ctcacggctc cctttgccag agtcagttca atcaggtctg atgtgagcaa tttacacact
     3661 tgtctcagaa agtccctcag ggtttgtaga ggactgcagg ggggcatccg ctgcagactc
     3721 agcctttctc tgcagccatc ctgcagtggg ggtgagcggg cacaggctga gaactgctct
     3781 tgggtggtgg aagcaggtgt cacggtgcaa gtctccccct gcacccctcc cccagcttga
     3841 gccgtgtcac ccccctctcc ctccagcatg ggcctgtgtc tcaggctctc tggaaggtgg
     3901 ccctgccccg gaccctcttg caggtgtcct ggtttgactt ggaactagat ggccatcttt
     3961 ccaggctttg gtggcccaag agcagtctgg gtggatggaa gtggctgtcc cctcctctcc
     4021 agcccctgcc cacccactgg tggaggtgct aactagcagg gacgtggcat aggatgggag
     4081 ctgggcgtga ggtgcttggg gtccattctt tgtccctcag cttctcagag tccggccagc
     4141 ccttgtgttc ccgtgcccca cactttcctc ctccccactg cagtgagtca atagtccagg
     4201 gtggggcctg gcctccctgc cctgattggg gactcaggag gtgaggcctg gggggcttcc
     4261 tgccccctcc ttgcccacct gcctgccccc gggcagcacg ggagggagag cagggtgagc
     4321 acgcttgttg gtttcagatg cactttctgc ttgcattgcc gtatctgtgc gttccttcat
     4381 cctggtcctg gctttatgga acaccatgtt tttagcatgt ttttaaataa aaacggataa
     4441 agtgtcaaaa gca
//
