LOCUS       XM_047428124            5006 bp    mRNA    linear   PRI 25-AUG-2024
DEFINITION  PREDICTED: Homo sapiens tetraspanin 9 (TSPAN9), transcript variant
            X1, mRNA.
ACCESSION   XM_047428124
VERSION     XM_047428124.1
DBLINK      BioProject: PRJNA168
KEYWORDS    RefSeq.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000012.12) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001405.40-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/23/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5006
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /chromosome="12"
     gene            1..5006
                     /gene="TSPAN9"
                     /gene_synonym="NET-5; NET5; PP1057"
                     /note="tetraspanin 9; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 2 mRNAs, 30 ESTs, 470
                     long SRA reads, 7 Proteins, and 100% coverage of the
                     annotated genomic feature by RNAseq alignments, including
                     157 samples with support for all annotated introns"
                     /db_xref="GeneID:10867"
                     /db_xref="HGNC:HGNC:21640"
                     /db_xref="MIM:613137"
     CDS             571..1563
                     /gene="TSPAN9"
                     /gene_synonym="NET-5; NET5; PP1057"
                     /codon_start=1
                     /product="tetraspanin-9 isoform X1"
                     /protein_id="XP_047284080.1"
                     /db_xref="GeneID:10867"
                     /db_xref="HGNC:HGNC:21640"
                     /db_xref="MIM:613137"
                     /translation="MEKSSSEDSSIHRSPSLDSKDSDFAKPSTSGRPFGRGFTAGAFY
                     GTAGSRGQSRAEAGVKTDKCNAPKGSKYVVFYLDLSFVFLLEFKKCNMARGCLCCLKY
                     MMFLFNLIFWLCGCGLLGVGIWLSVSQGNFATFSPSFPSLSAANLVIAIGTIVMVTGF
                     LGCLGAIKENKCLLLSFFIVLLVILLAELILLILFFVYMDKVNENAKKDLKEGLLLYH
                     TENNVGLKNAWNIIQAEMRCCGVTDYTDWYPVLGENTVPDRCCMENSQGCGRNATTPL
                     WRTGCYEKVKMWFDDNKHVLGTVGMCILIMQILGMAFSMTLFQHIHRTGKKYDA"
ORIGIN      
        1 gcagggaaag cccagcggtt gcagctgcgg cggatccctc ggcactgtcc gccgcgcgcc
       61 ggggcagccc agggccggcg gcagctccgc aaagtcgcgg aacgagagga ggcggagcgc
      121 cggccaagtg gtggggctca gcgctggggc tgggctgggc tgggagaggt gtgcccaggg
      181 agcctggatc ccggtgccct tctccctcgt gtggagcggc cagtgcggcc agaggcgagc
      241 tgacggcctg gaaagagaaa tcaaattgca gcctccccaa agacgctgag ttacgcgggc
      301 gagccggttc ccggggatcg ttcgcgagcg cgcagagagc cgcgccgcgc cgcagagccc
      361 tcccggggcc gccggccaga agcggggcgc cgtccgacag gcagcagccc ctgggcgcgg
      421 ggttcggccg cgagtgagcc cctgtgcaga gagggggcgt gcaaggctcc gccggccccc
      481 ccgcagcccg cgcccgactt gggcgccccc tccgtcccat tctgggagcg atgccccccg
      541 ctcctcgcac cccccgggaa cgccgcgagc atggagaagt cgagtagcga ggattcttcg
      601 atccatcgga gtccatcttt ggacagcaag gactcggact ttgccaagcc gtccacctcc
      661 ggccgcccgt tcggccgcgg cttcacggcc ggcgccttct acggcaccgc gggctcccgg
      721 ggccagagcc gcgccgaggc cggcgttaag accgacaagt gcaatgcacc caaaggcagc
      781 aagtacgtgg tgttttacct ggacctgtcc tttgtgttcc tcctagaatt taagaagtgc
      841 aacatggcca ggggctgcct ctgctgcttg aagtacatga tgttcctctt caatttgata
      901 ttctggctct gtggctgtgg gctgctggga gtgggcatct ggctctccgt gtcccaaggc
      961 aactttgcca ccttctcccc cagcttccct tcgttgtctg cagccaacct ggtcattgcc
     1021 ataggcacca ttgtcatggt gacgggcttc ctcggctgcc tgggggccat caaggaaaac
     1081 aagtgcctcc tcctcagctt tttcatcgtc ctgttggtca tcctcctagc agagctgatc
     1141 ttactcatcc tcttctttgt ctacatggac aaggtgaacg agaacgccaa gaaggacctg
     1201 aaggaaggcc tgctgctgta ccacaccgag aacaacgtgg ggctgaagaa cgcctggaac
     1261 atcatccagg ctgagatgcg atgctgtggt gtcactgact acacagactg gtacccagtg
     1321 ctgggggaga acacggttcc cgaccgctgc tgcatggaga actcccaggg ctgcgggcgc
     1381 aacgccacca cgcctttgtg gagaacgggc tgctatgaaa aggtgaagat gtggttcgat
     1441 gacaataagc acgtgctggg cacggtgggg atgtgcatcc tcatcatgca gatcctgggc
     1501 atggccttct ccatgaccct cttccagcac atccaccgga ctggtaagaa gtacgacgca
     1561 tgagcgggct ggccgggagt gcccaccccg ccctgctgcc ctgtggaggg aagaggattg
     1621 agctttgtgt cacctgcctg cgctctccag atatgacccc tgcacccacc ccccacagcc
     1681 tgccctaccc cacctaccct gcctcagcct cggacttctc agtgggtgga gtgccaggga
     1741 ggaggaggca cacggagacc tggggctcgg ggcccctgga ttcctgcatc tgcatatgcg
     1801 tatttgccaa agacgacagg gtgggctggg gtgcgctccg gaggaacccc cggcactgat
     1861 gggcttctgc ccctgccctt cctcacactg acactttgtc cccacatggg gtggggagca
     1921 gagtgcccgc cccgtggaga taccgcccca gcgggggctg cgacatccat ggccaccatg
     1981 gggcacctgg cggggcgggg gtctgccggc ctctgggcaa ggcccctgga gcatctcgcc
     2041 caggcttttt ataccttaca atgtaacttt tttattttat tttactctat gattattcag
     2101 gaatattatc tctcagataa gtttagggtt agatttctga tttgtaactt tttactgtgt
     2161 tgatttcttt aatggtttga ctttttttcc ctgagggtga gggatgggtg ggaagagagg
     2221 acatctgtcc agtctcaatc aggacagacc accgtgcgac acccaggagg ctctcggatg
     2281 gggcgcgcct gcgccctcag aacgtgtggg aaggaggggg cgtggacagg acacgggacc
     2341 ttgccaggcc tggtgtctga ggacaggagc ctgggagagg cgggtggagc gtgaagcagg
     2401 ctggaggtgc ccctgcacgg gaggtggcgt ttgctaacca atcgagctgg aaatgccagg
     2461 gcaggggggc cccacggtgc tgtggcagag ctagaggggt ccttagactt ttcactgatg
     2521 agcagttgtt ggttttttct ttctcccttc ctcccgctct ctgctggcac gcgaggcttc
     2581 cccttccacc ccatgtgggt attcccacaa caggttctgc acaccccagt tatttcacag
     2641 acattcctgc tagaaactgt cagacaaata cctctctagt tcggatgctg ctcactttcc
     2701 cccttgcttc tggaagggga agcagtcctt aggttttgct gtgctgggac agtggcaggg
     2761 gacccacagg ggtgaggacc cacggtcctc cccgccagcc ttgctcagct gtgggttgcc
     2821 ctgctgggaa ggagggaatc acgtccacct gggtcccaag atcttcgcct ccttccctgg
     2881 ggccacggac atcagcagtg ggttgggtgg cgattatatc atctgtgatc ccaaggagaa
     2941 gaaatacaga aaacccaaga gaggtcagac tggctcttgt taccggagcc acgggaagaa
     3001 agcagccgga gtcacgcacg tgcagagctg ggcatgggag agaaacgggc tggggagtga
     3061 ggccaggagt gggattcagc tgcagcaggg cgccccctcc aaactgcagc tggtctggct
     3121 tactgttttg ccgttcaaaa aggtcgcgaa tccgtgggac tgagcacggg gacctcaccc
     3181 gctagccagc gtctgctgca cttgatcagg tggggccttg gtgggcggct gcctttccta
     3241 tacagtttgt cttgtcaccc tggtttccca ctggggccag gtctcttctc cagcctccac
     3301 ctgcctgtct gatccaagag ctgagacacg gccacccagc accagtcact cctctgttca
     3361 ccttaagtaa cacacaaatc gggaacagga ggacagaacc gttggcatta tcaggattcg
     3421 tgttttgtgg gggtgggagt ggagagtagg gtggtcttgt gagttgtgca gggtgaagac
     3481 cgcttccctg agacaggggc agtggtgctg atggaatgtg ggggaggccc acatttgagc
     3541 aaagctgccc tgcccttgtc ccctggcctg gcttcctggt aaggagtttc agccgcctcc
     3601 gcaggaaccc ccaaagtgca gattccggag cagacacatc cgggcggaga gactcagcag
     3661 acaagtgctg cagttgcacg gtgggacccg gggcctcgtg cgttttttgc tgtgggtggg
     3721 gtgggtgggt tggtttatgc ctatcaatgc aatttttaat ttttgttaat atcaacagca
     3781 aaagcctagt gcattgggag atgtgcaacc tccctgaaaa tcttttctgt ttctggagta
     3841 cttcaggggt ggcctctggc cccagagcct ttgccacagt gctcccacca gcccccacct
     3901 catccgtctg tttgcagagc ctcatctaca ggtccccacg ctgccttctt tactcactct
     3961 gcgcttggcc gttttgttat ttggcttagt ctacattggg cggaagtctg tgtgcacaga
     4021 gtgggtgttc cttcgagccc cttccactca gagggccaca cccagcgatg ccagtgaagg
     4081 tggcacagcc tctcttcagt ttctcctgac tgtgatctca ctggggtaga attcccctga
     4141 gagaattccc tcactcacgg ctccctttgc cagagtcagt tcaatcaggt ctgatgtgag
     4201 caatttacac acttgtctca gaaagtccct cagggtttgt agaggactgc aggggggcat
     4261 ccgctgcaga ctcagccttt ctctgcagcc atcctgcagt gggggtgagc gggcacaggc
     4321 tgagaactgc tcttgggtgg tggaagcagg tgtcacggtg caagtctccc cctgcacccc
     4381 tcccccagct tgagccgtgt cacccccctc tccctccagc atgggcctgt gtctcaggct
     4441 ctctggaagg tggccctgcc ccggaccctc ttgcaggtgt cctggtttga cttggaacta
     4501 gatggccatc tttccaggct ttggtggccc aagagcagtc tgggtggatg gaagtggctg
     4561 tcccctcctc tccagcccct gcccacccac tggtggaggt gctaactagc agggacgtgg
     4621 cataggatgg gagctgggcg tgaggtgctt ggggtccatt ctttgtccct cagcttctca
     4681 gagtccggcc agcccttgtg ttcccgtgcc ccacactttc ctcctcccca ctgcagtgag
     4741 tcaatagtcc agggtggggc ctggcctccc tgccctgatt ggggactcag gaggtgaggc
     4801 ctggggggct tcctgccccc tccttgccca cctgcctgcc cccgggcagc acgggaggga
     4861 gagcagggtg agcacgcttg ttggtttcag atgcactttc tgcttgcatt gccgtatctg
     4921 tgcgttcctt catcctggtc ctggctttat ggaacaccat gtttttagca tgtttttaaa
     4981 taaaaacgga taaagtgtca aaagca
//
