LOCUS       XM_005253102            1297 bp    mRNA    linear   PRI 25-AUG-2024
DEFINITION  PREDICTED: Homo sapiens tetraspanin 4 (TSPAN4), transcript variant
            X1, mRNA.
ACCESSION   XM_005253102
VERSION     XM_005253102.2
DBLINK      BioProject: PRJNA168
KEYWORDS    RefSeq.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000011.10) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 5, 2022 this sequence version replaced XM_005253102.1.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001405.40-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/23/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1297
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /chromosome="11"
     gene            1..1297
                     /gene="TSPAN4"
                     /gene_synonym="NAG-2; NAG2; TETRASPAN; TM4SF7; TSPAN-4"
                     /note="tetraspanin 4; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 2 mRNAs, 120 ESTs, 353
                     long SRA reads, 6 Proteins, and 100% coverage of the
                     annotated genomic feature by RNAseq alignments, including
                     45 samples with support for all annotated introns"
                     /db_xref="GeneID:7106"
                     /db_xref="HGNC:HGNC:11859"
                     /db_xref="MIM:602644"
     CDS             100..816
                     /gene="TSPAN4"
                     /gene_synonym="NAG-2; NAG2; TETRASPAN; TM4SF7; TSPAN-4"
                     /codon_start=1
                     /product="tetraspanin-4 isoform X1"
                     /protein_id="XP_005253159.1"
                     /db_xref="GeneID:7106"
                     /db_xref="HGNC:HGNC:11859"
                     /db_xref="MIM:602644"
                     /translation="MARACLQAVKYLMFAFNLLFWLGGCGVLGVGIWLAATQGSFATL
                     SSSFPSLSAANLLIITGAFVMAIGFVGCLGAIKENKCLLLTFFLLLLLVFLLEATIAI
                     LFFAYTDKIDRYAQQDLKKGLHLYGTQGNVGLTNAWSIIQTDFRCCGVSNYTDWFEVY
                     NATRVPDSCCLEFSESCGLHAPGTWWKAPCYETVKVWLQENLLAVGIFGLCTALVQIL
                     GLTFAMTMYCQVVKADTYCA"
ORIGIN      
        1 gaagggcagg acaggggccc tgagtaacgg tggcctgggg tcagagccag gttcagctgc
       61 gaggctgctg gtggctgtgg agaactgaag cgctgcggca tggcgcgcgc ctgcctccag
      121 gccgtcaagt acctcatgtt cgccttcaac ctgctcttct ggctgggagg ctgtggcgtg
      181 ctgggtgtcg gcatctggct ggccgccaca caggggagct tcgccacgct gtcctcttcc
      241 ttcccgtccc tgtcggctgc caacttgctc atcatcaccg gcgcctttgt catggccatc
      301 ggcttcgtgg gctgcctggg tgccatcaag gagaacaagt gcctcctgct cactttcttc
      361 ctgctgctgc tgctggtgtt cctgctggag gccaccatcg ccatcctctt cttcgcctac
      421 acggacaaga ttgacaggta tgcccagcaa gacctgaaga aaggcttgca cctgtacggc
      481 acgcagggca acgtgggcct caccaacgcc tggagcatca tccagaccga cttccgctgc
      541 tgtggcgtct ccaactacac tgactggttc gaggtgtaca acgccacgcg ggtacctgac
      601 tcctgctgct tggagttcag tgagagctgt gggctgcacg cccccggcac ctggtggaag
      661 gcgccgtgct acgagacggt gaaggtgtgg cttcaggaga acctgctggc tgtgggcatc
      721 tttgggctgt gcacggcgct ggtgcagatc ctgggcctga ccttcgccat gaccatgtac
      781 tgccaagtgg tcaaggcaga cacctactgc gcgtaggccg cccaccgccc gcttctctgc
      841 caaaaggacg cccacgggga gatggccgca cccacagctg cctttcccac caccagcctc
      901 ggtgctctgc cccatgctgg gaggagggag ggagggacag gtgcctggag cccccggaac
      961 cctgtttctg gaaggcccta gctcaggtgg cttcagggcc tccggacccc ccctgggagg
     1021 ggtggccacg tgctggctgc ggaacccagg gcaggggtgg gaggggcctc cagcactttt
     1081 tatatttacg tattctccaa agcagtgttc acacgggagc cagcctgtgg cccccagcct
     1141 cctggaaaac aggttggcgc tggaggagcc gggtcttggc atcctggagg tggccccact
     1201 ggtcctggtg ctccaggcgg ggccgtggac ccctcaccta cattccatag tgggcccgtg
     1261 gggctcctgg tgcatcttaa taaagtgtga gcagcaa
//
