LOCUS       XM_011540460            1430 bp    mRNA    linear   PRI 25-AUG-2024
DEFINITION  PREDICTED: Homo sapiens tetraspanin 1 (TSPAN1), transcript variant
            X1, mRNA.
ACCESSION   XM_011540460
VERSION     XM_011540460.4
DBLINK      BioProject: PRJNA168
KEYWORDS    RefSeq.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000001.11) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 5, 2022 this sequence version replaced XM_011540460.3.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001405.40-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/23/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1430
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /chromosome="1"
     gene            1..1430
                     /gene="TSPAN1"
                     /gene_synonym="NET1; TM4C; TM4SF"
                     /note="tetraspanin 1; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 27 ESTs, 96 long SRA
                     reads, and 100% coverage of the annotated genomic feature
                     by RNAseq alignments, including 19 samples with support
                     for all annotated introns"
                     /db_xref="GeneID:10103"
                     /db_xref="HGNC:HGNC:20657"
                     /db_xref="MIM:613170"
     CDS             465..1241
                     /gene="TSPAN1"
                     /gene_synonym="NET1; TM4C; TM4SF"
                     /codon_start=1
                     /product="tetraspanin-1 isoform X1"
                     /protein_id="XP_011538762.1"
                     /db_xref="GeneID:10103"
                     /db_xref="HGNC:HGNC:20657"
                     /db_xref="MIM:613170"
                     /translation="MQCFSFIKTMMILFNLLIFLCGAALLAVGIWVSIDGASFLKIFG
                     PLSSSAMQFVNVGYFLIAAGVVVFALGFLGCYGAKTESKCALVTFFFILLLIFIAEVA
                     AAVVALVYTTMAEHFLTLLVVPAIKKDYGSQEDFTQVWNTTMKGLKCCGFTNYTDFED
                     SPYFKENSAFPPFCCNDNVTNTANETCTKQKAHDQKVEGCFNQLLYDIRTNAVTVGGV
                     AAGIGGLEFFSNSARRPPLPESLYSTPIRRDHVFLQPSPP"
     polyA_site      1430
                     /gene="TSPAN1"
                     /gene_synonym="NET1; TM4C; TM4SF"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 agacacacac accagcagct acacctacac gctgaccatc acaggcacac agaggcacat
       61 ccacctcaca tccacctcat acttgtgtac tctcagggtt cagtctttca tcctatccct
      121 ctctgatctg tgcctcccaa taccttccaa gatgtttaca gagacccttc tccctgtgca
      181 gttaggagtg taaggcaaga gagcccctac ttcatggggc agatcaagag ctgagaccaa
      241 agatggtcta tgttgctgac cttgtcctgt cctcctgctg tcttaaacta tgatccctgc
      301 tgcggtcact gaagcctttc cctgtgagca gtggtgtgtg agagccaggc gtccctctgc
      361 ctgcccactc agtggcaaca cccgggagct gttttgtcct ttgtggagcc tcagcagttc
      421 cctctttcag aactcactgc caagagccct gaacaggagc caccatgcag tgcttcagct
      481 tcattaagac catgatgatc ctcttcaatt tgctcatctt tctgtgtggt gcagccctgt
      541 tggcagtggg catctgggtg tcaatcgatg gggcatcctt tctgaagatc ttcgggccac
      601 tgtcgtccag tgccatgcag tttgtcaacg tgggctactt cctcatcgca gccggcgttg
      661 tggtctttgc tcttggtttc ctgggctgct atggtgctaa gactgagagc aagtgtgccc
      721 tcgtgacgtt cttcttcatc ctcctcctca tcttcattgc tgaggttgca gctgctgtgg
      781 tcgccttggt gtacaccaca atggctgagc acttcctgac gttgctggta gtgcctgcca
      841 tcaagaaaga ttatggttcc caggaagact tcactcaagt gtggaacacc accatgaaag
      901 ggctcaagtg ctgtggcttc accaactata cggattttga ggactcaccc tacttcaaag
      961 agaacagtgc ctttccccca ttctgttgca atgacaacgt caccaacaca gccaatgaaa
     1021 cctgcaccaa gcaaaaggct cacgaccaaa aagtagaggg ttgcttcaat cagcttttgt
     1081 atgacatccg aactaatgca gtcaccgtgg gtggtgtggc agctggaatt gggggcctcg
     1141 agttcttttc caactcagct cgaaggccac ctcttccaga aagcctctat agcactccca
     1201 tcagaagaga tcacgtcttt ctacaaccct cccctccatg actttcatgg ctcttagagc
     1261 ctctgctgtc tctgcttcat cctggaagta tcacaatcct ccaccacact gaacccctca
     1321 aggtagggcc aggtctgatt actttcaggt ccccagtgcc cagcacaagg ctgaggccaa
     1381 agaaaggacc aggggatggt tataaaataa atcaatgaat tgactgccta
//
