LOCUS       XM_047440102            2171 bp    mRNA    linear   PRI 25-AUG-2024
DEFINITION  PREDICTED: Homo sapiens transient receptor potential cation channel
            subfamily C member 4 associated protein (TRPC4AP), transcript
            variant X9, mRNA.
ACCESSION   XM_047440102
VERSION     XM_047440102.1
DBLINK      BioProject: PRJNA168
KEYWORDS    RefSeq.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000020.11) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001405.40-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/23/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2171
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /chromosome="20"
     gene            1..2171
                     /gene="TRPC4AP"
                     /gene_synonym="C20orf188; PPP1R158; TRRP4AP; TRUSS"
                     /note="transient receptor potential cation channel
                     subfamily C member 4 associated protein; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 5 mRNAs, 81 ESTs, 795 long SRA reads, 3 Proteins, and
                     100% coverage of the annotated genomic feature by RNAseq
                     alignments, including 95 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:26133"
                     /db_xref="HGNC:HGNC:16181"
                     /db_xref="MIM:608430"
     CDS             230..1429
                     /gene="TRPC4AP"
                     /gene_synonym="C20orf188; PPP1R158; TRRP4AP; TRUSS"
                     /codon_start=1
                     /product="short transient receptor potential channel
                     4-associated protein isoform X9"
                     /protein_id="XP_047296058.1"
                     /db_xref="GeneID:26133"
                     /db_xref="HGNC:HGNC:16181"
                     /db_xref="MIM:608430"
                     /translation="MRSQSTIKVHRMIAEFKLIPGLNNLFDKLIWRKHSASALVLHGH
                     NQNCDCSPDITLKIQFLRLLQSFSDHHENKYLLLNNQELNELSAISLKANIPEVEAVL
                     NTDRSLVCDGKRGLLTRLLQVMKKEPAESSFRFWQARAVESFLRGTTSYADQMFLLKR
                     GLLEHILYCIVDSECKSRDVLQSYFDLLGELMKFNVDAFKRFNKYINTDAKFQVFLKQ
                     INSSLVDSNMLVRCVTLSLDRFENQVDMKVAEVLSECRLLAYISQVPTQMSFLFRLIN
                     IIHVQTLTQENVSCLNTSLVILMLARRKERLPLYLRLLQRMEHSKKYPGFLLNNFHNL
                     LRFWQQHYLHKDKDSTCLENSSCISFSYWKETVSILLNPDRQSPSALVSYIEEPYMDI
                     DRDFTEE"
ORIGIN      
        1 gatgacaagt aagaagacat tcttacaaac agcaaccctc attgaagata ttttgggtgt
       61 taaaaagcgg cccttctcag cattcctggc tttgttgagc ggctttgcaa actggcgact
      121 cgaaaggtgt cagagtcaac gggcacagcc agcttccttc aggagttgga agagtggtac
      181 acatggctag acaatgcttt ggtgctagat gccctgatgc gagtggccaa tgaggagtca
      241 gagcacaatc aaggttcaca gaatgattgc agagttcaag ctgatccctg gacttaataa
      301 tttgtttgac aaactgattt ggaggaagca ttcagcatct gcccttgtcc tccatggtca
      361 caaccagaac tgtgactgta gcccggacat caccttgaag atacagtttt tgaggcttct
      421 tcagagcttc agtgaccacc acgagaacaa gtacttgtta ctcaacaacc aggagctgaa
      481 tgaactcagt gccatctctc tcaaggccaa catccctgag gtggaagctg tcctcaacac
      541 cgacaggagt ttggtgtgtg atgggaagag gggcttatta actcgtctgc tgcaggtcat
      601 gaagaaggag ccagcagagt cgtctttcag gttttggcaa gctcgggctg tggagagttt
      661 cctccgaggg accacctcct atgcagacca gatgttcctg ctgaagcgag gcctcttgga
      721 gcacatcctt tactgcattg tggacagcga gtgtaagtca agggatgtgc tccagagtta
      781 ctttgacctc ctgggggagc tgatgaagtt caacgttgat gcattcaaga gattcaataa
      841 atatatcaac accgatgcaa agttccaggt attcctgaag cagatcaaca gctccctggt
      901 ggactccaac atgctggtgc gctgtgtcac tctgtccctg gaccgatttg aaaaccaggt
      961 ggatatgaaa gttgccgagg tactgtctga atgccgcctg ctcgcctaca tatcccaggt
     1021 gcccacgcag atgtccttcc tcttccgcct catcaacatc atccacgtgc agacgctgac
     1081 ccaggagaac gtcagctgcc tcaacaccag cctggtgatc ctgatgctgg cccgacggaa
     1141 agagcggctg cccctgtacc tgcggctgct gcagcggatg gagcacagca agaagtaccc
     1201 cggcttcctg ctcaacaact tccacaacct gctgcgcttc tggcagcagc actacctgca
     1261 caaggacaag gacagcacct gcctagagaa cagctcctgc atcagcttct catactggaa
     1321 ggagacagtg tccatcctgt tgaacccgga ccggcagtca ccctctgctc tcgttagcta
     1381 cattgaggag ccctacatgg acatagacag ggacttcact gaggagtgac cttgggccag
     1441 gcctcgggag gctgctgggc cagtgtgggt gagcgtgggt acgatgccac acgccctgcc
     1501 ctgttcccgt tcctccctgc tgctctctgc ctgccccagg tctttgggta caggcttggt
     1561 gggagggaag tcctagaagc ccttggtccc cctgggtctg agggccctag gtcatggaga
     1621 gcctcagtcc ccataatgag gacagggtac catgcccacc tttccttcag aaccctgggg
     1681 cccagggcca cccagaggta agaggacatt tagcattagc tctgtgtgag ctcctgccgg
     1741 tttcttggct gtcagtcagt cccagagtgg ggaggaagat atgggtgacc cccacccccc
     1801 atctgtgagc caagcctccc ttgtccctgg cctttggacc caggcaaagg cttctgagcc
     1861 ctgggcaggg gtggtgggta ccagagaatg ctgccttccc ccaagcctgc ccctctgcct
     1921 cattttcctg tagctcctct ggttctgttt gctcattggc cgctgtgttc atccaagggg
     1981 gttctcccag aagtgagggg cctttccctc catcccttgg ggcacggggc agctgtgcct
     2041 gccctgcctc tgcctgaggc agccgctcct gcctgagcct ggacatgggg cccttccttg
     2101 tgttgccaat ttattaacag caaataaacc aattaaatgg agactattaa ataactttat
     2161 tttaaaaatg a
//
