LOCUS       XM_047423316            8730 bp    mRNA    linear   PRI 25-AUG-2024
DEFINITION  PREDICTED: Homo sapiens tenascin C (TNC), transcript variant X13,
            mRNA.
ACCESSION   XM_047423316
VERSION     XM_047423316.1
DBLINK      BioProject: PRJNA168
KEYWORDS    RefSeq.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000009.12) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001405.40-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/23/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8730
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /chromosome="9"
     gene            1..8730
                     /gene="TNC"
                     /gene_synonym="150-225; DFNA56; GMEM; GP; HXB; JI; TN;
                     TN-C"
                     /note="tenascin C; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 2 mRNAs, 120 ESTs, 2401
                     long SRA reads, 2 Proteins, and 98% coverage of the
                     annotated genomic feature by RNAseq alignments, including
                     2 samples with support for all annotated introns"
                     /db_xref="GeneID:3371"
                     /db_xref="HGNC:HGNC:5318"
                     /db_xref="MIM:187380"
     CDS             543..7148
                     /gene="TNC"
                     /gene_synonym="150-225; DFNA56; GMEM; GP; HXB; JI; TN;
                     TN-C"
                     /codon_start=1
                     /product="tenascin isoform X7"
                     /protein_id="XP_047279272.1"
                     /db_xref="GeneID:3371"
                     /db_xref="HGNC:HGNC:5318"
                     /db_xref="MIM:187380"
                     /translation="MGAMTQLLAGVFLAFLALATEGGVLKKVIRHKRQSGVNATLPEE
                     NQPVVFNHVYNIKLPVGSQCSVDLESASGEKDLAPPSEPSESFQEHTVDGENQIVFTH
                     RINIPRRACGCAAAPDVKELLSRLEELENLVSSLREQCTAGAGCCLQPATGRLDTRPF
                     CSGRGNFSTEGCGCVCEPGWKGPNCSEPECPGNCHLRGRCIDGQCICDDGFTGEDCSQ
                     LACPSDCNDQGKCVNGVCICFEGYAGADCSREICPVPCSEEHGTCVDGLCVCHDGFAG
                     DDCNKPLCLNNCYNRGRCVENECVCDEGFTGEDCSELICPNDCFDRGRCINGTCYCEE
                     GFTGEDCGKPTCPHACHTQGRCEEGQCVCDEGFAGVDCSEKRCPADCHNRGRCVDGRC
                     ECDDGFTGADCGELKCPNGCSGHGRCVNGQCVCDEGYTGEDCSQLRCPNDCHSRGRCV
                     EGKCVCEQGFKGYDCSDMSCPNDCHQHGRCVNGMCVCDDGYTGEDCRDRQCPRDCSNR
                     GLCVDGQCVCEDGFTGPDCAELSCPNDCHGQGRCVNGQCVCHEGFMGKDCKEQRCPSD
                     CHGQGRCVDGQCICHEGFTGLDCGQHSCPSDCNNLGQCVSGRCICNEGYSGEDCSEVS
                     PPKDLVVTEVTEETVNLAWDNEMRVTEYLVVYTPTHEGGLEMQFRVPGDQTSTIIQEL
                     EPGVEYFIRVFAILENKKSIPVSARVATYLPAPEGLKFKSIKETSVEVEWDPLDIAFE
                     TWEIIFRNMNKEDEGEITKSLRRPETSYRQTGLAPGQEYEISLHIVKNNTRGPGLKRV
                     TTTRLDAPSQIEVKDVTDTTALITWFKPLAEIDGIELTYGIKDVPGDRTTIDLTEDEN
                     QYSIGNLKPDTEYEVSLISRRGDMSSNPAKETFTTGLDAPRNLRRVSQTDNSITLEWR
                     NGKAAIDSYRIKYAPISGGDHAEVDVPKSQQATTKTTLTGLRPGTEYGIGVSAVKEDK
                     ESNPATINAATELDTPKDLQVSETAETSLTLLWKTPLAKFDRYRLNYSLPTGQWVGVQ
                     LPRNTTSYVLRGLEPGQEYNVLLTAEKGRHKSKPARVKASTEQAPELENLTVTEVGWD
                     GLRLNWTAADQAYEHFIIQVQEANKVEAARNLTVPGSLRAVDIPGLKAATPYTVSIYG
                     VIQGYRTPVLSAEASTGETPNLGEVVVAEVGWDALKLNWTAPEGAYEYFFIQVQEADT
                     VEAAQNLTVPGGLRSTDLPGLKAATHYTITIRGVTQDFSTTPLSVEVLTEEVPDMGNL
                     TVTEVSWDALRLNWTTPDGTYDQFTIQVQEADQVEEAHNLTVPGSLRSMEIPGLRAGT
                     PYTVTLHGEVRGHSTRPLAVEVVTEDLPQLGDLAVSEVGWDGLRLNWTAADNAYEHFV
                     IQVQEVNKVEAAQNLTLPGSLRAVDIPGLEAATPYRVSIYGVIRGYRTPVLSAEASTA
                     KEPEIGNLNVSDITPESFNLSWMATDGIFETFTIEIIDSNRLLETVEYNISGAERTAH
                     ISGLPPSTDFIVYLSGLAPSIRTKTISATATTEALPLLENLTISDINPYGFTVSWMAS
                     ENAFDSFLVTVVDSGKLLDPQEFTLSGTQRKLELRGLITGIGYEVMVSGFTQGHQTKP
                     LRAEIVTEAEPEVDNLLVSDATPDGFRLSWTADEGVFDNFVLKIRDTKKQSEPLEITL
                     LAPERTRDITGLREATEYEIELYGISKGRRSQTVSAIATTAMGSPKEVIFSDITENSA
                     TVSWRAPTAQVESFRITYVPITGGTPSMVTVDGTKTQTRLVKLIPGVEYLVSIIAMKG
                     FEESEPVSGSFTTALDGPSGLVTANITDSEALARWQPAIATVDSYVISYTGEKVPEIT
                     RTVSGNTVEYALTDLEPATEYTLRIFAEKGPQKSSTITAKFTTDLDSPRDLTATEVQS
                     ETALLTWRPPRASVTGYLLVYESVDGTVKEVIVGPDTTSYSLADLSPSTHYTAKIQAL
                     NGPLRSNMIQTIFTTIGLLYPFPKDCSQAMLNGDTTSGLYTIYLNGDKAEALEVFCDM
                     TSDGGGWIVFLRRKNGRENFYQNWKAYAAGFGDRREEFWLGLDNLNKITAQGQYELRV
                     DLRDHGETAFAVYDKFSVGDAKTRYKLKVEGYSGTAGDSMAYHNGRSFSTFDKDTDSA
                     ITNCALSYKGAFWYRNCHRVNLMGRYGDNNHSQGVNWFHWKGHEHSIQFAEMKLRPSN
                     FRNLEGRRKRA"
ORIGIN      
        1 ggccacagcc tgcctactgt cacccgcctc tcccgcgcgc agatacacgc ccccgcctcc
       61 gtgggcacaa aggcagcgct gctggggaac tcgggggaac gcgcacgtgg gaaccgccgc
      121 agctccacac tccaggtact tcttccaagg acctaggtct ctcgcccatc ggaaagaaag
      181 gaaaactact atccatccca gccaggcaag cccaattcag gactgaagaa gatttattca
      241 gtcctagaca accaagtgaa gagtttctgg ctttgtgcgc atacaagtca tttgcaggag
      301 atatttctat agacacctag ctgtgctttc ttacaagaaa acatatccac tggaccaaag
      361 cgcagccccc ttcatgctga agccacttca gtttgaaacg taaaaaaaaa taattctttc
      421 aagaagatca gggacaactg atttgaagtc tactctgtgc ttctaaatcc ccaattctgc
      481 tgaaagtgag ataccctaga gccctagagc cccagcagca cccagccaaa cccacctcca
      541 ccatgggggc catgactcag ctgttggcag gtgtctttct tgctttcctt gccctcgcta
      601 ccgaaggtgg ggtcctcaag aaagtcatcc ggcacaagcg acagagtggg gtgaacgcca
      661 ccctgccaga agagaaccag ccagtggtgt ttaaccacgt ttacaacatc aagctgccag
      721 tgggatccca gtgttcggtg gatctggagt cagccagtgg ggagaaagac ctggcaccgc
      781 cttcagagcc cagcgaaagc tttcaggagc acacagtgga tggggaaaac cagattgtct
      841 tcacacatcg catcaacatc ccccgccggg cctgtggctg tgccgcagcc cctgatgtta
      901 aggagctgct gagcagactg gaggagctgg agaacctggt gtcttccctg agggagcaat
      961 gtactgcagg agcaggctgc tgtctccagc ctgccacagg ccgcttggac accaggccct
     1021 tctgtagcgg tcggggcaac ttcagcactg aaggatgtgg ctgtgtctgc gaacctggct
     1081 ggaaaggccc caactgctct gagcccgaat gtccaggcaa ctgtcacctt cgaggccggt
     1141 gcattgatgg gcagtgcatc tgtgacgacg gcttcacggg cgaggactgc agccagctgg
     1201 cttgccccag cgactgcaat gaccagggca agtgcgtaaa tggagtctgc atctgtttcg
     1261 aaggctacgc cggggctgac tgcagccgtg aaatctgccc agtgccctgc agtgaggagc
     1321 acggcacatg tgtagatggc ttgtgtgtgt gccacgatgg ctttgcaggc gatgactgca
     1381 acaagcctct gtgtctcaac aattgctaca accgtggacg atgcgtggag aatgagtgcg
     1441 tgtgtgatga gggtttcacg ggcgaagact gcagtgagct catctgcccc aatgactgct
     1501 tcgaccgggg ccgctgcatc aatggcacct gctactgcga agaaggcttc acaggtgaag
     1561 actgcgggaa acccacctgc ccacatgcct gccacaccca gggccggtgt gaggaggggc
     1621 agtgtgtatg tgatgagggc tttgccggtg tggactgcag cgagaagagg tgtcctgctg
     1681 actgtcacaa tcgtggccgc tgtgtagacg ggcggtgtga gtgtgatgat ggtttcactg
     1741 gagctgactg tggggagctc aagtgtccca atggctgcag tggccatggc cgctgtgtca
     1801 atgggcagtg tgtgtgtgat gagggctata ctggggagga ctgcagccag ctacggtgcc
     1861 ccaatgactg tcacagtcgg ggccgctgtg tcgagggcaa atgtgtatgt gagcaaggct
     1921 tcaagggcta tgactgcagt gacatgagct gccctaatga ctgtcaccag cacggccgct
     1981 gtgtgaatgg catgtgtgtt tgtgatgacg gctacacagg ggaagactgc cgggatcgcc
     2041 aatgccccag ggactgcagc aacaggggcc tctgtgtgga cggacagtgc gtctgtgagg
     2101 acggcttcac cggccctgac tgtgcagaac tctcctgtcc aaatgactgc catggccagg
     2161 gtcgctgtgt gaatgggcag tgcgtgtgcc atgaaggatt tatgggcaaa gactgcaagg
     2221 agcaaagatg tcccagtgac tgtcatggcc agggccgctg cgtggacggc cagtgcatct
     2281 gccacgaggg cttcacaggc ctggactgtg gccagcactc ctgccccagt gactgcaaca
     2341 acttaggaca atgcgtctcg ggccgctgca tctgcaacga gggctacagc ggagaagact
     2401 gctcagaggt gtctcctccc aaagacctcg ttgtgacaga agtgacggaa gagacggtca
     2461 acctggcctg ggacaatgag atgcgggtca cagagtacct tgtcgtgtac acgcccaccc
     2521 acgagggtgg tctggaaatg cagttccgtg tgcctgggga ccagacgtcc accatcatcc
     2581 aggagctgga gcctggtgtg gagtacttta tccgtgtatt tgccatcctg gagaacaaga
     2641 agagcattcc tgtcagcgcc agggtggcca cgtacttacc tgcacctgaa ggcctgaaat
     2701 tcaagtccat caaggagaca tctgtggaag tggagtggga tcctctagac attgcttttg
     2761 aaacctggga gatcatcttc cggaatatga ataaagaaga tgagggagag atcaccaaaa
     2821 gcctgaggag gccagagacc tcttaccggc aaactggtct agctcctggg caagagtatg
     2881 agatatctct gcacatagtg aaaaacaata cccggggccc tggcctgaag agggtgacca
     2941 ccacacgctt ggatgccccc agccagatcg aggtgaaaga tgtcacagac accactgcct
     3001 tgatcacctg gttcaagccc ctggctgaga tcgatggcat tgagctgacc tacggcatca
     3061 aagacgtgcc aggagaccgt accaccatcg atctcacaga ggacgagaac cagtactcca
     3121 tcgggaacct gaagcctgac actgagtacg aggtgtccct catctcccgc agaggtgaca
     3181 tgtcaagcaa cccagccaaa gagaccttca caacaggcct cgatgctccc aggaatcttc
     3241 gacgtgtttc ccagacagat aacagcatca ccctggaatg gaggaatggc aaggcagcta
     3301 ttgacagtta cagaattaag tatgccccca tctctggagg ggaccacgct gaggttgatg
     3361 ttccaaagag ccaacaagcc acaaccaaaa ccacactcac aggtctgagg ccgggaactg
     3421 aatatgggat tggagtttct gctgtgaagg aagacaagga gagcaatcca gcgaccatca
     3481 acgcagccac agagttggac acgcccaagg accttcaggt ttctgaaact gcagagacca
     3541 gcctgaccct gctctggaag acaccgttgg ccaaatttga ccgctaccgc ctcaattaca
     3601 gtctccccac aggccagtgg gtgggagtgc agcttccaag aaacaccact tcctatgtcc
     3661 tgagaggcct ggaaccagga caggagtaca atgtcctcct gacagccgag aaaggcagac
     3721 acaagagcaa gcccgcacgt gtgaaggcat ccactgaaca agcccctgag ctggaaaacc
     3781 tcaccgtgac tgaggttggc tgggatggcc tcagactcaa ctggaccgca gctgaccagg
     3841 cctatgagca ctttatcatt caggtgcagg aggccaacaa ggtggaggca gctcggaacc
     3901 tcaccgtgcc tggcagcctt cgggctgtgg acataccggg cctcaaggct gctacgcctt
     3961 atacagtctc catctatggg gtgatccagg gctatagaac accagtgctc tctgctgagg
     4021 cctccacagg ggaaactccc aatttgggag aggtcgtggt ggccgaggtg ggctgggatg
     4081 ccctcaaact caactggact gctccagaag gggcctatga gtactttttc attcaggtgc
     4141 aggaggctga cacagtagag gcagcccaga acctcaccgt cccaggagga ctgaggtcca
     4201 cagacctgcc tgggctcaaa gcagccactc attataccat caccatccgc ggggtcactc
     4261 aggacttcag cacaacccct ctctctgttg aagtcttgac agaggaggtt ccagatatgg
     4321 gaaacctcac agtgaccgag gttagctggg atgctctcag actgaactgg accacgccag
     4381 atggaaccta tgaccagttt actattcagg tccaggaggc tgaccaggtg gaagaggctc
     4441 acaatctcac ggttcctggc agcctgcgtt ccatggaaat cccaggcctc agggctggca
     4501 ctccttacac agtcaccctg cacggcgagg tcaggggcca cagcactcga ccccttgctg
     4561 tagaggtcgt cacagaggat ctcccacagc tgggagattt agccgtgtct gaggttggct
     4621 gggatggcct cagactcaac tggaccgcag ctgacaatgc ctatgagcac tttgtcattc
     4681 aggtgcagga ggtcaacaaa gtggaggcag cccagaacct cacgttgcct ggcagcctca
     4741 gggctgtgga catcccgggc ctcgaggctg ccacgcctta tagagtctcc atctatgggg
     4801 tgatccgggg ctatagaaca ccagtactct ctgctgaggc ctccacagcc aaagaacctg
     4861 aaattggaaa cttaaatgtt tctgacataa ctcccgagag cttcaatctc tcctggatgg
     4921 ctaccgatgg gatcttcgag acctttacca ttgaaattat tgattccaat aggttgctgg
     4981 agactgtgga atataatatc tctggtgctg aacgaactgc ccatatctca gggctacccc
     5041 ctagtactga ttttattgtc tacctctctg gacttgctcc cagcatccgg accaaaacca
     5101 tcagtgccac agccacgaca gaggccctgc cccttctgga aaacctaacc atttccgaca
     5161 ttaatcccta cgggttcaca gtttcctgga tggcatcgga gaatgccttt gacagctttc
     5221 tagtaacggt ggtggattct gggaagctgc tggaccccca ggaattcaca ctttcaggaa
     5281 cccagaggaa gctggagctt agaggcctca taactggcat tggctatgag gttatggtct
     5341 ctggcttcac ccaagggcat caaaccaagc ccttgagggc tgagattgtt acagaagccg
     5401 aaccggaagt tgacaacctt ctggtttcag atgccacccc agacggtttc cgtctgtcct
     5461 ggacagctga tgaaggggtc ttcgacaatt ttgttctcaa aatcagagat accaaaaagc
     5521 agtctgagcc actggaaata accctacttg cccccgaacg taccagggac ataacaggtc
     5581 tcagagaggc tactgaatac gaaattgaac tctatggaat aagcaaagga aggcgatccc
     5641 agacagtcag tgctatagca acaacagcca tgggctcccc aaaggaagtc attttctcag
     5701 acatcactga aaattcggct actgtcagct ggagggcacc cacagcccaa gtggagagct
     5761 tccggattac ctatgtgccc attacaggag gtacaccctc catggtaact gtggacggaa
     5821 ccaagactca gaccaggctg gtgaaactca tacctggcgt ggagtacctt gtcagcatca
     5881 tcgccatgaa gggctttgag gaaagtgaac ctgtctcagg gtcattcacc acagctctgg
     5941 atggcccatc tggcctggtg acagccaaca tcactgactc agaagccttg gccaggtggc
     6001 agccagccat tgccactgtg gacagttatg tcatctccta cacaggcgag aaagtgccag
     6061 aaattacacg cacggtgtcc gggaacacag tggagtatgc tctgaccgac ctcgagcctg
     6121 ccacggaata cacactgaga atctttgcag agaaagggcc ccagaagagc tcaaccatca
     6181 ctgccaagtt cacaacagac ctcgattctc caagagactt gactgctact gaggttcagt
     6241 cggaaactgc cctccttacc tggcgacccc cccgggcatc agtcaccggt tacctgctgg
     6301 tctatgaatc agtggatggc acagtcaagg aagtcattgt gggtccagat accacctcct
     6361 acagcctggc agacctgagc ccatccaccc actacacagc caagatccag gcactcaatg
     6421 ggcccctgag gagcaatatg atccagacca tcttcaccac aattggactc ctgtacccct
     6481 tccccaagga ctgctcccaa gcaatgctga atggagacac gacctctggc ctctacacca
     6541 tttatctgaa tggtgataag gctgaggcgc tggaagtctt ctgtgacatg acctctgatg
     6601 ggggtggatg gattgtgttc ctgagacgca aaaacggacg cgagaacttc taccaaaact
     6661 ggaaggcata tgctgctgga tttggggacc gcagagaaga attctggctt gggctggaca
     6721 acctgaacaa aatcacagcc caggggcagt acgagctccg ggtggacctg cgggaccatg
     6781 gggagacagc ctttgctgtc tatgacaagt tcagcgtggg agatgccaag actcgctaca
     6841 agctgaaggt ggaggggtac agtgggacag caggtgactc catggcctac cacaatggca
     6901 gatccttctc cacctttgac aaggacacag attcagccat caccaactgt gctctgtcct
     6961 acaaaggggc tttctggtac aggaactgtc accgtgtcaa cctgatgggg agatatgggg
     7021 acaataacca cagtcagggc gttaactggt tccactggaa gggccacgaa cactcaatcc
     7081 agtttgctga gatgaagctg agaccaagca acttcagaaa tcttgaaggc aggcgcaaac
     7141 gggcataaat tccagggacc actgggtgag agaggaataa ggcccagagc gaggaaagga
     7201 ttttaccaaa gcatcaatac aaccagccca accatcggtc cacacctggg catttggtga
     7261 gagtcaaagc tgaccatgga tccctggggc caacggcaac agcatgggcc tcacctcctc
     7321 tgtgatttct ttctttgcac caaagacatc agtctccaac atgtttctgt tttgttgttt
     7381 gattcagcaa aaatctccca gtgacaacat cgcaatagtt ttttacttct cttaggtggc
     7441 tctgggaatg ggagaggggt aggatgtaca ggggtagttt gttttagaac cagccgtatt
     7501 ttacatgaag ctgtataatt aattgtcatt atttttgtta gcaaagatta aatgtgtcat
     7561 tggaagccat cccttttttt acatttcata caacagaaac cagaaaagca atactgtttc
     7621 cattttaagg atatgattaa tattattaat ataataatga tgatgatgat gatgaaaact
     7681 aaggattttt caagagatct ttctttccaa aacatttctg gacagtacct gattgtattt
     7741 tttttttaaa taaaagcaca agtacttttg agtttgttat tttgctttga attgttgagt
     7801 ctgaatttca ccaaagccaa tcatttgaac aaagcgggga atgttgggat aggaaaggta
     7861 agtagggata gtggtcaagt gggaggggtg gaaaggagac taaagactgg gagagaggga
     7921 agcacttttt ttaaataaag ttgaacacac ttgggaaaag cttacaggcc aggcctgtaa
     7981 tcccaacact ttgggaggcc aaggtgggag gatagcttaa ccccaggagt ttgagaccag
     8041 cctgagcaac atagtgagaa cttgtctcta cagaaaaaaa aaaaaaaaaa aatttaatta
     8101 ggcaagcgtg gtagtgcgca cctgtcgtcc cagctactca ggaggctgag gtaggaaaat
     8161 cactggagcc caggagttag aggttacagt gagctatgat cacactactg cactccagcc
     8221 tgggcaacag agggagaccc tgtctctaaa taaaaaaaga aaagaaaaaa aaagcttaca
     8281 acttgagatt cagcatcttg ctcagtattt ccaagactaa tagattatgg tttaaaagat
     8341 gcttttatac tcattttcta atgcaactcc tagaaactct atgatatagt tgaggtaagt
     8401 attgttacca cacatgggct aagatcccca gaggcagact gcctgagttc aattcttggc
     8461 tccaccattc ccaagttccc taacctctct atgcctcagt ttcctcttct gtaaagtagg
     8521 gacactcata cttctcattt cagaacattt ttgtgaagaa taaattatgt tatccatttg
     8581 aggcccttag aatggtaccc ggtgtatatt aagtgctagt acatgttagc tatcatcatt
     8641 atcactttat atgagatgga ctggggttca tagaaaccca atgacttgat tgtggctact
     8701 actcaataaa taatagaatt tggatttaaa
//
