LOCUS       NM_001080462            1318 bp    mRNA    linear   PRI 03-AUG-2024
DEFINITION  Homo sapiens transmembrane protein 202 (TMEM202), transcript
            variant 1, mRNA.
ACCESSION   NM_001080462 XM_294751
VERSION     NM_001080462.3
KEYWORDS    RefSeq; MANE Select.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 1318)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC009690.17 and AC079322.5.
            
            On May 17, 2019 this sequence version replaced NM_001080462.2.
            
            Transcript Variant: This variant (1) represents the longest,
            protein-coding variant.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR5189667.333396.1,
                                           SRR5189667.382907.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA1968968, SAMEA2148093
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            MANE Ensembl match     :: ENST00000341689.4/ ENSP00000340212.3
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-103               AC009690.17        182216-182318
            104-359             AC009690.17        182564-182819
            360-509             AC079322.5         161587-161736       c
            510-641             AC079322.5         161121-161252       c
            642-1318            AC079322.5         159971-160647       c
FEATURES             Location/Qualifiers
     source          1..1318
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /chromosome="15"
                     /map="15q23-q24.1"
     gene            1..1318
                     /gene="TMEM202"
                     /note="transmembrane protein 202"
                     /db_xref="GeneID:338949"
                     /db_xref="HGNC:HGNC:33733"
     exon            1..103
                     /gene="TMEM202"
                     /inference="alignment:Splign:2.1.0"
     CDS             23..844
                     /gene="TMEM202"
                     /codon_start=1
                     /product="transmembrane protein 202"
                     /protein_id="NP_001073931.1"
                     /db_xref="CCDS:CCDS32287.1"
                     /db_xref="GeneID:338949"
                     /db_xref="HGNC:HGNC:33733"
                     /translation="MERREHLTLTFHSPEVPKIKGNRKYQRPTVPAKKHPSASMSCQR
                     QQQLMDQAHIYIRTLCGSLCSFSLLMLIAMSPLNWVQFLVIKNGLELYAGLWTLCNHE
                     LCWSHTPKPPYYLQYSRAFFLISVFTILTGLGWLFSSWILNRGSMTTNLDLKVSMLSF
                     ISATCLLLCLNLFVAQVHWHTRDAMESDLLWTYYLNWCSDIFYMFAGIISLLNYLTSR
                     SPACDENVTVIPTERSRLGVGPVTTVSPAKDEGPRSEMESLSVREKNLPKSGLWW"
     exon            104..359
                     /gene="TMEM202"
                     /inference="alignment:Splign:2.1.0"
     exon            360..509
                     /gene="TMEM202"
                     /inference="alignment:Splign:2.1.0"
     exon            510..641
                     /gene="TMEM202"
                     /inference="alignment:Splign:2.1.0"
     exon            642..1318
                     /gene="TMEM202"
                     /inference="alignment:Splign:2.1.0"
     regulatory      961..966
                     /regulatory_class="polyA_signal_sequence"
                     /gene="TMEM202"
                     /note="hexamer: ATTAAA"
     polyA_site      980
                     /gene="TMEM202"
                     /note="major polyA site"
ORIGIN      
        1 agttagagaa ctaactgcca agatggagcg aagggaacat ttaaccttga ctttccacag
       61 tcctgaggtt cccaaaataa aggggaaccg gaaataccaa aggcctaccg tccctgccaa
      121 gaaacatcca agtgcctcga tgtcatgcca aaggcagcag cagcttatgg atcaggcaca
      181 catctacatc cgaacgctct gtggcagcct ctgtagtttt agcctcctaa tgctgatcgc
      241 catgtcccca ctgaactggg tacagtttct ggtgatcaag aatggccttg agctctacgc
      301 aggactctgg accttatgca accatgagct gtgctggagc cacacaccca agccacccta
      361 ttatctccaa tattccaggg ccttctttct catctctgtc tttaccatac ttactggcct
      421 tggctggctc ttcagctctt ggatccttaa tcgaggaagc atgaccacca acttggatct
      481 gaaggtatcc atgctcagct tcatctcagc tacctgcttg ctcctctgcc tcaacctgtt
      541 tgtggcacag gttcactggc atactaggga tgccatggag tcagatctcc tatggaccta
      601 ttatcttaac tggtgcagtg acatctttta catgtttgct gggatcatct ctcttctcaa
      661 ctacttaact tccagatcgc ctgcctgtga tgaaaacgtc actgtgattc caacagagag
      721 atcaaggctg ggggttggtc cggtgactac agtatcacct gctaaagatg aagggccaag
      781 gtctgagatg gaatctctaa gtgtgagaga gaaaaattta ccaaagtcag gactgtggtg
      841 gtgataggaa aacctaacta tagcttgtct taaaagcagg ggagaagctg agttgggaat
      901 ggtcacataa attctgggaa actctcctaa tatcatgtcc atattacttg aggagacagc
      961 attaaagctg atgaaatgtc ttttgcgtgc attggatcca aaatatatat gatagtcata
     1021 aagtaaataa ctcacttaag aaaaacattt ctaaaagaaa acaacaatgt ttagagtcat
     1081 gaatgaaaga aactagtgaa agatgcagtg tgtagaccag agacctcttt gggtatcagg
     1141 gatctcatgg accagaatgg cccgtggaga agaatgttaa ttacttctgt ttggaatttt
     1201 ctttattatg tgtggctttg ggtatactca ggatggaaag cacttggaca aatactgttg
     1261 aatctgaact taatagcatt accagaaatg gaataaatat caatggatat aagaccta
//
