LOCUS       NM_152706               1039 bp    mRNA    linear   PRI 04-APR-2024
DEFINITION  Homo sapiens testis expressed 47 (TEX47), mRNA.
ACCESSION   NM_152706
VERSION     NM_152706.4
KEYWORDS    RefSeq; MANE Select.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 1039)
  AUTHORS   Kutomi,O., Yamamoto,R., Hirose,K., Mizuno,K., Nakagiri,Y., Imai,H.,
            Noga,A., Obbineni,J.M., Zimmermann,N., Nakajima,M., Shibata,D.,
            Shibata,M., Shiba,K., Kita,M., Kigoshi,H., Tanaka,Y., Yamasaki,Y.,
            Asahina,Y., Song,C., Nomura,M., Nomura,M., Nakajima,A., Nakachi,M.,
            Yamada,L., Nakazawa,S., Sawada,H., Murata,K., Mitsuoka,K.,
            Ishikawa,T., Wakabayashi,K.I., Kon,T. and Inaba,K.
  TITLE     A dynein-associated photoreceptor protein prevents ciliary
            acclimation to blue light
  JOURNAL   Sci Adv 7 (9) (2021)
   PUBMED   33637535
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1039)
  AUTHORS   Luck,K., Kim,D.K., Lambourne,L., Spirohn,K., Begg,B.E., Bian,W.,
            Brignall,R., Cafarelli,T., Campos-Laborie,F.J., Charloteaux,B.,
            Choi,D., Cote,A.G., Daley,M., Deimling,S., Desbuleux,A., Dricot,A.,
            Gebbia,M., Hardy,M.F., Kishore,N., Knapp,J.J., Kovacs,I.A.,
            Lemmens,I., Mee,M.W., Mellor,J.C., Pollis,C., Pons,C.,
            Richardson,A.D., Schlabach,S., Teeking,B., Yadav,A., Babor,M.,
            Balcha,D., Basha,O., Bowman-Colin,C., Chin,S.F., Choi,S.G.,
            Colabella,C., Coppin,G., D'Amata,C., De Ridder,D., De Rouck,S.,
            Duran-Frigola,M., Ennajdaoui,H., Goebels,F., Goehring,L., Gopal,A.,
            Haddad,G., Hatchi,E., Helmy,M., Jacob,Y., Kassa,Y., Landini,S.,
            Li,R., van Lieshout,N., MacWilliams,A., Markey,D., Paulson,J.N.,
            Rangarajan,S., Rasla,J., Rayhan,A., Rolland,T., San-Miguel,A.,
            Shen,Y., Sheykhkarimli,D., Sheynkman,G.M., Simonovsky,E., Tasan,M.,
            Tejeda,A., Tropepe,V., Twizere,J.C., Wang,Y., Weatheritt,R.J.,
            Weile,J., Xia,Y., Yang,X., Yeger-Lotem,E., Zhong,Q., Aloy,P.,
            Bader,G.D., De Las Rivas,J., Gaudet,S., Hao,T., Rak,J.,
            Tavernier,J., Hill,D.E., Vidal,M., Roth,F.P. and Calderwood,M.A.
  TITLE     A reference map of the human binary protein interactome
  JOURNAL   Nature 580 (7803), 402-408 (2020)
   PUBMED   32296183
REFERENCE   3  (bases 1 to 1039)
  AUTHORS   Eriksson,N., Tung,J.Y., Kiefer,A.K., Hinds,D.A., Francke,U.,
            Mountain,J.L. and Do,C.B.
  TITLE     Novel associations for hypothyroidism include known autoimmune risk
            loci
  JOURNAL   PLoS One 7 (4), e34442 (2012)
   PUBMED   22493691
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC002127.1 and BC028365.2.
            
            On Nov 22, 2018 this sequence version replaced NM_152706.3.
            
            ##Evidence-Data-START##
            Transcript exon combination :: SRR5189667.44105.1,
                                           SRR5189667.406451.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA1968968, SAMEA2148093
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            MANE Ensembl match     :: ENST00000297203.3/ ENSP00000297203.2
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-20                AC002127.1         102249-102268       c
            21-1039             BC028365.2         1-1019
FEATURES             Location/Qualifiers
     source          1..1039
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /chromosome="7"
                     /map="7q21.13"
     gene            1..1039
                     /gene="TEX47"
                     /gene_synonym="C7orf62; DYBLUF"
                     /note="testis expressed 47"
                     /db_xref="GeneID:219557"
                     /db_xref="HGNC:HGNC:22402"
     exon            1..98
                     /gene="TEX47"
                     /gene_synonym="C7orf62; DYBLUF"
                     /inference="alignment:Splign:2.1.0"
     exon            99..1039
                     /gene="TEX47"
                     /gene_synonym="C7orf62; DYBLUF"
                     /inference="alignment:Splign:2.1.0"
     CDS             203..964
                     /gene="TEX47"
                     /gene_synonym="C7orf62; DYBLUF"
                     /note="uncharacterized protein C7orf62; dynein-associated
                     BLUF protein"
                     /codon_start=1
                     /product="testis-expressed protein 47"
                     /protein_id="NP_689919.1"
                     /db_xref="CCDS:CCDS34678.1"
                     /db_xref="GeneID:219557"
                     /db_xref="HGNC:HGNC:22402"
                     /translation="MSFSVHNQKGSKRPLPLEPLLFLQVPRSNYLHFQEEKQRLHLKK
                     FLLDRMFLVAKIQANVERKDVADYYEQMFQSVLKHHLGEAVTGLLLIYPTSILHILES
                     SSDTLYKVLLDYIGHVKDETVFFIQQMKIIVISHNIPMRLFMQWHVSVIKVPVMYLDD
                     VTQSQSLKEVITDFLTQTHKLSLYLCQTMKVGTKGPGDNLHQVAPDLLLPEQIIKYLC
                     KSEEFMDPATFINMYNRPIHITLDSEVVWPAPSRF"
     regulatory      1015..1020
                     /regulatory_class="polyA_signal_sequence"
                     /gene="TEX47"
                     /gene_synonym="C7orf62; DYBLUF"
                     /note="hexamer: AATAAA"
     polyA_site      1039
                     /gene="TEX47"
                     /gene_synonym="C7orf62; DYBLUF"
                     /note="major polyA site"
ORIGIN      
        1 gagaacacca gaggactggc agttgggagc ctgatggagg acaagtaggg cctcgaggac
       61 aggtgcgtga cagaagcaca ggaaaaaaaa gaaaaatgaa gaaataaaaa cacgagttca
      121 tcagtaaaga ggtaccctgg cagcataaat attatgataa gctaaaagct ggaatcatct
      181 ggaaaaataa ataagactcc tcatgtcctt ttcggtccat aaccagaagg gcagcaaaag
      241 gcctttgcca ctggaacctc ttctttttct ccaagtccca cgtagcaatt acctgcactt
      301 tcaagaagag aaacaacgac tacacctaaa gaaattcctt cttgatagga tgtttctagt
      361 ggccaagata caagcaaatg tagaaagaaa agatgttgct gactactatg aacaaatgtt
      421 tcagtcagtt ttgaaacatc acctaggaga agcagtgaca ggattgctgc tcatctatcc
      481 cacttccatt ctgcatatcc tcgagtcctc cagcgacact ctctacaaag ttcttttaga
      541 ttatattggc catgtcaaag atgaaacagt attttttatt caacaaatga aaattatagt
      601 catttctcat aacattccaa tgaggctttt tatgcaatgg catgtttcag tgataaaagt
      661 tccagttatg tatctcgacg atgtgacaca gtcacagtcc ctaaaggagg tcatcacaga
      721 ttttctcaca caaactcata aactgtcact ctacctttgc cagactatga aagtaggcac
      781 taaaggacca ggcgataact tacaccaagt tgcacctgac ctactcctcc cagaacaaat
      841 cataaagtac ttgtgcaaat ccgaagaatt catggacccg gcaacattta taaacatgta
      901 taatagaccc atacacatca ctctggattc tgaggtggta tggcctgctc cttcacgttt
      961 ctaggattga gagggataat gtgcccatgt ctcttaagga gtttgtgcta cttaaataaa
     1021 aaaaacattt ttaaagtta
//
