LOCUS       NM_031273               1248 bp    mRNA    linear   PRI 04-JUN-2024
DEFINITION  Homo sapiens testis expressed 13B (TEX13B), mRNA.
ACCESSION   NM_031273
VERSION     NM_031273.2
KEYWORDS    RefSeq; MANE Select.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 1248)
  AUTHORS   Luck,K., Kim,D.K., Lambourne,L., Spirohn,K., Begg,B.E., Bian,W.,
            Brignall,R., Cafarelli,T., Campos-Laborie,F.J., Charloteaux,B.,
            Choi,D., Cote,A.G., Daley,M., Deimling,S., Desbuleux,A., Dricot,A.,
            Gebbia,M., Hardy,M.F., Kishore,N., Knapp,J.J., Kovacs,I.A.,
            Lemmens,I., Mee,M.W., Mellor,J.C., Pollis,C., Pons,C.,
            Richardson,A.D., Schlabach,S., Teeking,B., Yadav,A., Babor,M.,
            Balcha,D., Basha,O., Bowman-Colin,C., Chin,S.F., Choi,S.G.,
            Colabella,C., Coppin,G., D'Amata,C., De Ridder,D., De Rouck,S.,
            Duran-Frigola,M., Ennajdaoui,H., Goebels,F., Goehring,L., Gopal,A.,
            Haddad,G., Hatchi,E., Helmy,M., Jacob,Y., Kassa,Y., Landini,S.,
            Li,R., van Lieshout,N., MacWilliams,A., Markey,D., Paulson,J.N.,
            Rangarajan,S., Rasla,J., Rayhan,A., Rolland,T., San-Miguel,A.,
            Shen,Y., Sheykhkarimli,D., Sheynkman,G.M., Simonovsky,E., Tasan,M.,
            Tejeda,A., Tropepe,V., Twizere,J.C., Wang,Y., Weatheritt,R.J.,
            Weile,J., Xia,Y., Yang,X., Yeger-Lotem,E., Zhong,Q., Aloy,P.,
            Bader,G.D., De Las Rivas,J., Gaudet,S., Hao,T., Rak,J.,
            Tavernier,J., Hill,D.E., Vidal,M., Roth,F.P. and Calderwood,M.A.
  TITLE     A reference map of the human binary protein interactome
  JOURNAL   Nature 580 (7803), 402-408 (2020)
   PUBMED   32296183
REFERENCE   2  (bases 1 to 1248)
  AUTHORS   Ross,M.T., Grafham,D.V., Coffey,A.J., Scherer,S., McLay,K.,
            Muzny,D., Platzer,M., Howell,G.R., Burrows,C., Bird,C.P.,
            Frankish,A., Lovell,F.L., Howe,K.L., Ashurst,J.L., Fulton,R.S.,
            Sudbrak,R., Wen,G., Jones,M.C., Hurles,M.E., Andrews,T.D.,
            Scott,C.E., Searle,S., Ramser,J., Whittaker,A., Deadman,R.,
            Carter,N.P., Hunt,S.E., Chen,R., Cree,A., Gunaratne,P., Havlak,P.,
            Hodgson,A., Metzker,M.L., Richards,S., Scott,G., Steffen,D.,
            Sodergren,E., Wheeler,D.A., Worley,K.C., Ainscough,R.,
            Ambrose,K.D., Ansari-Lari,M.A., Aradhya,S., Ashwell,R.I.,
            Babbage,A.K., Bagguley,C.L., Ballabio,A., Banerjee,R., Barker,G.E.,
            Barlow,K.F., Barrett,I.P., Bates,K.N., Beare,D.M., Beasley,H.,
            Beasley,O., Beck,A., Bethel,G., Blechschmidt,K., Brady,N.,
            Bray-Allen,S., Bridgeman,A.M., Brown,A.J., Brown,M.J., Bonnin,D.,
            Bruford,E.A., Buhay,C., Burch,P., Burford,D., Burgess,J.,
            Burrill,W., Burton,J., Bye,J.M., Carder,C., Carrel,L., Chako,J.,
            Chapman,J.C., Chavez,D., Chen,E., Chen,G., Chen,Y., Chen,Z.,
            Chinault,C., Ciccodicola,A., Clark,S.Y., Clarke,G., Clee,C.M.,
            Clegg,S., Clerc-Blankenburg,K., Clifford,K., Cobley,V., Cole,C.G.,
            Conquer,J.S., Corby,N., Connor,R.E., David,R., Davies,J., Davis,C.,
            Davis,J., Delgado,O., Deshazo,D., Dhami,P., Ding,Y., Dinh,H.,
            Dodsworth,S., Draper,H., Dugan-Rocha,S., Dunham,A., Dunn,M.,
            Durbin,K.J., Dutta,I., Eades,T., Ellwood,M., Emery-Cohen,A.,
            Errington,H., Evans,K.L., Faulkner,L., Francis,F., Frankland,J.,
            Fraser,A.E., Galgoczy,P., Gilbert,J., Gill,R., Glockner,G.,
            Gregory,S.G., Gribble,S., Griffiths,C., Grocock,R., Gu,Y.,
            Gwilliam,R., Hamilton,C., Hart,E.A., Hawes,A., Heath,P.D.,
            Heitmann,K., Hennig,S., Hernandez,J., Hinzmann,B., Ho,S., Hoffs,M.,
            Howden,P.J., Huckle,E.J., Hume,J., Hunt,P.J., Hunt,A.R.,
            Isherwood,J., Jacob,L., Johnson,D., Jones,S., de Jong,P.J.,
            Joseph,S.S., Keenan,S., Kelly,S., Kershaw,J.K., Khan,Z.,
            Kioschis,P., Klages,S., Knights,A.J., Kosiura,A., Kovar-Smith,C.,
            Laird,G.K., Langford,C., Lawlor,S., Leversha,M., Lewis,L., Liu,W.,
            Lloyd,C., Lloyd,D.M., Loulseged,H., Loveland,J.E., Lovell,J.D.,
            Lozado,R., Lu,J., Lyne,R., Ma,J., Maheshwari,M., Matthews,L.H.,
            McDowall,J., McLaren,S., McMurray,A., Meidl,P., Meitinger,T.,
            Milne,S., Miner,G., Mistry,S.L., Morgan,M., Morris,S., Muller,I.,
            Mullikin,J.C., Nguyen,N., Nordsiek,G., Nyakatura,G., O'Dell,C.N.,
            Okwuonu,G., Palmer,S., Pandian,R., Parker,D., Parrish,J.,
            Pasternak,S., Patel,D., Pearce,A.V., Pearson,D.M., Pelan,S.E.,
            Perez,L., Porter,K.M., Ramsey,Y., Reichwald,K., Rhodes,S.,
            Ridler,K.A., Schlessinger,D., Schueler,M.G., Sehra,H.K.,
            Shaw-Smith,C., Shen,H., Sheridan,E.M., Shownkeen,R., Skuce,C.D.,
            Smith,M.L., Sotheran,E.C., Steingruber,H.E., Steward,C.A.,
            Storey,R., Swann,R.M., Swarbreck,D., Tabor,P.E., Taudien,S.,
            Taylor,T., Teague,B., Thomas,K., Thorpe,A., Timms,K., Tracey,A.,
            Trevanion,S., Tromans,A.C., d'Urso,M., Verduzco,D., Villasana,D.,
            Waldron,L., Wall,M., Wang,Q., Warren,J., Warry,G.L., Wei,X.,
            West,A., Whitehead,S.L., Whiteley,M.N., Wilkinson,J.E.,
            Willey,D.L., Williams,G., Williams,L., Williamson,A.,
            Williamson,H., Wilming,L., Woodmansey,R.L., Wray,P.W., Yen,J.,
            Zhang,J., Zhou,J., Zoghbi,H., Zorilla,S., Buck,D., Reinhardt,R.,
            Poustka,A., Rosenthal,A., Lehrach,H., Meindl,A., Minx,P.J.,
            Hillier,L.W., Willard,H.F., Wilson,R.K., Waterston,R.H., Rice,C.M.,
            Vaudin,M., Coulson,A., Nelson,D.L., Weinstock,G., Sulston,J.E.,
            Durbin,R., Hubbard,T., Gibbs,R.A., Beck,S., Rogers,J. and
            Bentley,D.R.
  TITLE     The DNA sequence of the human X chromosome
  JOURNAL   Nature 434 (7031), 325-337 (2005)
   PUBMED   15772651
REFERENCE   3  (bases 1 to 1248)
  AUTHORS   Lee,S., Lee,S.H., Chung,T.G., Kim,H.J., Yoon,T.K., Kwak,I.P.,
            Park,S.H., Cha,W.T., Cho,S.W. and Cha,K.Y.
  TITLE     Molecular and cytogenetic characterization of two azoospermic
            patients with X-autosome translocation
  JOURNAL   J Assist Reprod Genet 20 (9), 385-389 (2003)
   PUBMED   14531651
REFERENCE   4  (bases 1 to 1248)
  AUTHORS   Wang,P.J., McCarrey,J.R., Yang,F. and Page,D.C.
  TITLE     An abundance of X-linked genes expressed in spermatogonia
  JOURNAL   Nat Genet 27 (4), 422-426 (2001)
   PUBMED   11279525
COMMENT     REVIEWED REFSEQ: This record has been curated by NCBI staff. The
            reference sequence was derived from AF285598.1 and AL034399.6.
            This sequence is a reference standard in the RefSeqGene project.
            
            On Mar 22, 2007 this sequence version replaced NM_031273.1.
            
            Summary: This gene is similar to a mouse gene that is expressed in
            the testis. [provided by RefSeq, Jul 2008].
            
            ##Evidence-Data-START##
            Transcript exon combination :: AF285598.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA1968968, SAMEA2148093
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            MANE Ensembl match     :: ENST00000302917.1/ ENSP00000303777.1
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-1212              AF285598.1         1-1212
            1213-1248           AL034399.6         23234-23269
FEATURES             Location/Qualifiers
     source          1..1248
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /chromosome="X"
                     /map="Xq22.3"
     gene            1..1248
                     /gene="TEX13B"
                     /gene_synonym="TGC3B; TSGA5"
                     /note="testis expressed 13B"
                     /db_xref="GeneID:56156"
                     /db_xref="HGNC:HGNC:11736"
                     /db_xref="MIM:300313"
     exon            1..61
                     /gene="TEX13B"
                     /gene_synonym="TGC3B; TSGA5"
                     /inference="alignment:Splign:2.1.0"
     exon            62..552
                     /gene="TEX13B"
                     /gene_synonym="TGC3B; TSGA5"
                     /inference="alignment:Splign:2.1.0"
     CDS             94..1032
                     /gene="TEX13B"
                     /gene_synonym="TGC3B; TSGA5"
                     /note="testis expressed sequence 13B; testis-expressed
                     sequence 13B protein"
                     /codon_start=1
                     /product="testis-expressed protein 13B"
                     /protein_id="NP_112563.1"
                     /db_xref="CCDS:CCDS14534.1"
                     /db_xref="GeneID:56156"
                     /db_xref="HGNC:HGNC:11736"
                     /db_xref="MIM:300313"
                     /translation="MALRPEDPSSGFRHGNVVAFIIEKMARHTKGPEFYFENISLSWE
                     EVEDKLRAILEDSEVPSEVKEACTWGSLALGVRFAHRQGQLQNRRVQWLQGFAKLHRS
                     AALVLASNLTELKEQQEMECNEATFQLQLTETSLAEVQRERDMLRWKLFHAELAPPQG
                     QGQATVFPGLATAGGDWTEGAGEQEKEAVAAAGAAGGKGEERYAEAGPAPAEVLQGLG
                     GGFRQPLGAIVAGKLHLCGAEGERSQVSTNSHVCLLWAWVHSLTGASSCPAPYLIHIL
                     IPMPFVRLLSHTQYTPFTSKGHRTGSNSDAFQLGGL"
     exon            553..1248
                     /gene="TEX13B"
                     /gene_synonym="TGC3B; TSGA5"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 tctcttcagg cgtgttaagc agcggggttg gcctgtactt cctctggccc tggctgaaga
       61 gggctagtga aaccgttaag cccctaggcg atcatggcct tgagacctga ggaccccagt
      121 agtgggttcc ggcacggaaa cgtggtggcc ttcatcatcg agaaaatggc caggcacacg
      181 aaaggccccg agttctactt cgagaatata tccttatcct gggaggaggt ggaagacaag
      241 ctcagggcca tcctggagga cagcgaggtg cccagcgagg tcaaagaggc ctgcacctgg
      301 ggcagcctgg ccttgggtgt gcgctttgcc cacaggcagg ggcagttaca aaaccgcagg
      361 gtgcagtggc tgcaaggctt tgccaaactg cacagatcag ctgcgctggt cttggcctca
      421 aacctgacgg aactcaagga acagcaggag atggaatgca atgaggcgac cttccagttg
      481 cagctaaccg agaccagcct tgcggaggtg cagagagagc gggacatgct gagatggaag
      541 ctcttccatg ccgagctggc acctccccag ggacagggcc aggctacagt gtttccaggc
      601 ctggccactg ccggagggga ttggacagaa ggagcaggtg agcaggaaaa ggaggcggtg
      661 gctgctgctg gtgctgctgg aggaaaagga gaggagaggt atgcagaggc agggcctgcc
      721 cccgcagagg tcttgcaggg gctgggagga ggcttcaggc agcccctcgg agctattgta
      781 gcaggcaaat tacacctttg cggggcagag ggagaaagat ctcaggtcag tacaaacagc
      841 catgtctgtc ttctctgggc ttgggtccac agtctcactg gagcctcttc ctgtccagct
      901 ccctacctca ttcacatact catacccatg ccctttgtcc gccttctcag ccatacccaa
      961 tataccccct tcaccagcaa aggtcacaga acgggttcca actcagatgc ctttcaactg
     1021 gggggcctct gatgctagcc tgtggtcaga tgtggaggcc cagggaatag accctcaaga
     1081 gcccccaaga gacaggagag actccgaact ccatcagcag agaagacctc cagtatatcg
     1141 caggccaggg aactgggact gcccgtggtg taaagctgtg aatttttcat ggagggaaaa
     1201 ttgcttcctc tgtgggaggc gaatctggct gcaaaagcct cagtaaat
//
