LOCUS       NM_031274               1397 bp    mRNA    linear   PRI 07-APR-2024
DEFINITION  Homo sapiens testis expressed 13A (TEX13A), transcript variant 1,
            mRNA.
ACCESSION   NM_031274
VERSION     NM_031274.5
KEYWORDS    RefSeq; MANE Select.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 1397)
  AUTHORS   Luck,K., Kim,D.K., Lambourne,L., Spirohn,K., Begg,B.E., Bian,W.,
            Brignall,R., Cafarelli,T., Campos-Laborie,F.J., Charloteaux,B.,
            Choi,D., Cote,A.G., Daley,M., Deimling,S., Desbuleux,A., Dricot,A.,
            Gebbia,M., Hardy,M.F., Kishore,N., Knapp,J.J., Kovacs,I.A.,
            Lemmens,I., Mee,M.W., Mellor,J.C., Pollis,C., Pons,C.,
            Richardson,A.D., Schlabach,S., Teeking,B., Yadav,A., Babor,M.,
            Balcha,D., Basha,O., Bowman-Colin,C., Chin,S.F., Choi,S.G.,
            Colabella,C., Coppin,G., D'Amata,C., De Ridder,D., De Rouck,S.,
            Duran-Frigola,M., Ennajdaoui,H., Goebels,F., Goehring,L., Gopal,A.,
            Haddad,G., Hatchi,E., Helmy,M., Jacob,Y., Kassa,Y., Landini,S.,
            Li,R., van Lieshout,N., MacWilliams,A., Markey,D., Paulson,J.N.,
            Rangarajan,S., Rasla,J., Rayhan,A., Rolland,T., San-Miguel,A.,
            Shen,Y., Sheykhkarimli,D., Sheynkman,G.M., Simonovsky,E., Tasan,M.,
            Tejeda,A., Tropepe,V., Twizere,J.C., Wang,Y., Weatheritt,R.J.,
            Weile,J., Xia,Y., Yang,X., Yeger-Lotem,E., Zhong,Q., Aloy,P.,
            Bader,G.D., De Las Rivas,J., Gaudet,S., Hao,T., Rak,J.,
            Tavernier,J., Hill,D.E., Vidal,M., Roth,F.P. and Calderwood,M.A.
  TITLE     A reference map of the human binary protein interactome
  JOURNAL   Nature 580 (7803), 402-408 (2020)
   PUBMED   32296183
REFERENCE   2  (bases 1 to 1397)
  AUTHORS   Lee,S., Lee,S.H., Chung,T.G., Kim,H.J., Yoon,T.K., Kwak,I.P.,
            Park,S.H., Cha,W.T., Cho,S.W. and Cha,K.Y.
  TITLE     Molecular and cytogenetic characterization of two azoospermic
            patients with X-autosome translocation
  JOURNAL   J Assist Reprod Genet 20 (9), 385-389 (2003)
   PUBMED   14531651
REFERENCE   3  (bases 1 to 1397)
  AUTHORS   Wang,P.J., McCarrey,J.R., Yang,F. and Page,D.C.
  TITLE     An abundance of X-linked genes expressed in spermatogonia
  JOURNAL   Nat Genet 27 (4), 422-426 (2001)
   PUBMED   11279525
  REMARK    GeneRIF: Tex13a was identified as a spermatagonia-specific gene in
            mouse.
COMMENT     REVIEWED REFSEQ: This record has been curated by NCBI staff. The
            reference sequence was derived from Z74477.2.
            This sequence is a reference standard in the RefSeqGene project.
            
            On Dec 4, 2019 this sequence version replaced NM_031274.4.
            
            Summary: This gene is similar to a mouse gene that is expressed in
            the testis. Alternative splicing results in multiple transcript
            variants. [provided by RefSeq, Mar 2014].
            
            Transcript Variant: This variant (1) represents the longer
            transcript. Both variants 1 and 2 encode the same protein.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AF285597.1, BC108734.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA1968968, SAMEA2148093
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            MANE Ensembl match     :: ENST00000600991.6/ ENSP00000471604.2
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-100               Z74477.2           41310-41409         c
            101-567             Z74477.2           40678-41144         c
            568-1397            Z74477.2           39644-40473         c
FEATURES             Location/Qualifiers
     source          1..1397
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /chromosome="X"
                     /map="Xq22.3"
     gene            1..1397
                     /gene="TEX13A"
                     /note="testis expressed 13A"
                     /db_xref="GeneID:56157"
                     /db_xref="HGNC:HGNC:11735"
                     /db_xref="MIM:300312"
     exon            1..100
                     /gene="TEX13A"
                     /inference="alignment:Splign:2.1.0"
     exon            101..567
                     /gene="TEX13A"
                     /inference="alignment:Splign:2.1.0"
     CDS             133..1362
                     /gene="TEX13A"
                     /note="testis-expressed sequence 13A protein"
                     /codon_start=1
                     /product="testis-expressed protein 13A"
                     /protein_id="NP_112564.1"
                     /db_xref="CCDS:CCDS76005.1"
                     /db_xref="GeneID:56157"
                     /db_xref="HGNC:HGNC:11735"
                     /db_xref="MIM:300312"
                     /translation="MALRPEDPSSGFRHSNVVAFINEKMARHTKGPEFYLENISLSWE
                     KVEDKLRAILEDSEVPSEVKEACTWGSLALGVRFAHRQAQLQRHRVRWLHGFAKLHKS
                     AAQALASDLKKLREQQETERKEAASRLRMAQTSLVEVQKERDKELVSPHEWEQGAGWP
                     GLATAGGVCTEGAAEEEEEAAVAAAGAAGGKGAEEEQRDVEVVAAPVEAMAPPVEAGA
                     APMETQFPHVEARAASMETTEKLERILLQLLGDADQEKYTYWGQKEGDLRSVETATSY
                     FSGTTNPWSRASSEPLPVQLPASYSYSYSSPFSSFSDIPTISPPQATVTAPVPPQLPS
                     DWEAFDTSLWSDGGPHRIDHQEHPRDRRYSEPHQQRPPVYRRPGDWDCPWCNAVNFSR
                     RDTCFDCGKGIWLQKPH"
     exon            568..1397
                     /gene="TEX13A"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 ctttccctgg aaccttagga gggagagaga tcttcctctc tcttcgggcg tgttaagaca
       61 gcggggttgg cctgtacttc ctctggccct ggctgaagag ggctagtgaa accgttaaac
      121 ccctaggcga tcatggcctt gagacctgag gaccccagta gcgggttccg gcatagcaac
      181 gtggtggcct tcatcaacga gaaaatggcc aggcacacga aaggccccga gttctatctt
      241 gagaatatat ccttatcctg ggagaaggtg gaagacaagc tgagggccat actggaggac
      301 agcgaggtgc ccagtgaggt caaagaggcc tgcacctggg gcagcctggc cttgggagtg
      361 cgctttgccc acaggcaggc acagctacaa aggcacaggg tgcggtggct gcacggcttc
      421 gccaaactgc acaaatcagc cgcacaggcc ttggcatcag acctgaagaa gctcagggag
      481 cagcaggaga cggaacgcaa ggaggcggcc tcccggctaa gaatggccca gaccagcctc
      541 gtggaggtgc agaaagagag agacaaggag ctggtgtctc cccatgagtg ggagcagggg
      601 gcagggtggc caggcctggc cactgccgga ggggtttgca cagaaggagc agctgaggag
      661 gaagaagagg cggcggtggc tgctgctggt gctgctggag gaaaaggagc agaagaagag
      721 cagagggatg tggaggttgt ggctgcccct gtggaggcca tggctccccc tgtggaggct
      781 ggggctgccc ccatggagac ccagttcccc cacgtggagg ccagggctgc ctccatggag
      841 accacagaga agctggagag aatcctcctg cagctccttg gagatgctga tcaggaaaag
      901 tacacctatt gggggcagaa ggagggagat ctccggtcgg tcgaaacagc cacatcttat
      961 ttctctggaa ccacgaaccc ctggtccaga gcctcatcag aacctcttcc tgtccagctc
     1021 cctgcctcat actcatactc atactcaagc cctttttcct ccttctcaga catacccact
     1081 atatcccctc cacaagcaac agtcacagca ccagttccgc ctcagctgcc ttccgactgg
     1141 gaggcctttg atactagcct gtggtctgat ggggggcccc acagaataga ccatcaggag
     1201 cacccaagag acaggagata ctccgaacct catcagcaaa gacctccagt atatcgcagg
     1261 ccaggggact gggactgccc ttggtgtaac gctgtgaatt tttcacggag ggatacttgc
     1321 ttcgactgtg ggaagggaat ctggctgcaa aaacctcatt gagtgcagaa atgcaaaata
     1381 gaaccgaagc atgtata
//
