LOCUS       XM_047420781            2269 bp    mRNA    linear   PRI 25-AUG-2024
DEFINITION  PREDICTED: Homo sapiens TATA-box binding protein associated factor
            6 (TAF6), transcript variant X4, mRNA.
ACCESSION   XM_047420781
VERSION     XM_047420781.1
DBLINK      BioProject: PRJNA168
KEYWORDS    RefSeq.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000007.14) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001405.40-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/23/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2269
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /chromosome="7"
     gene            1..2269
                     /gene="TAF6"
                     /gene_synonym="ALYUS; MGC:8964; TAF(II)70; TAF(II)80;
                     TAF2E; TAFII-70; TAFII-80; TAFII70; TAFII80; TAFII85"
                     /note="TATA-box binding protein associated factor 6;
                     Derived by automated computational analysis using gene
                     prediction method: Gnomon. Supporting evidence includes
                     similarity to: 42 ESTs, 674 long SRA reads, 1 Protein, and
                     100% coverage of the annotated genomic feature by RNAseq
                     alignments, including 19 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:6878"
                     /db_xref="HGNC:HGNC:11540"
                     /db_xref="MIM:602955"
     CDS             90..2093
                     /gene="TAF6"
                     /gene_synonym="ALYUS; MGC:8964; TAF(II)70; TAF(II)80;
                     TAF2E; TAFII-70; TAFII-80; TAFII70; TAFII80; TAFII85"
                     /codon_start=1
                     /product="transcription initiation factor TFIID subunit 6
                     isoform X2"
                     /protein_id="XP_047276737.1"
                     /db_xref="GeneID:6878"
                     /db_xref="HGNC:HGNC:11540"
                     /db_xref="MIM:602955"
                     /translation="MAEEKKLKLSNTVLPSESMKVVAESMGIAQIQEETCQLLTDEDA
                     LKFMHMGKRQKLTTSDIDYALKLKNVEPLYGFHAQEFIPFRFASGGGRELYFYEEKEV
                     DLSDIINTPLPRVPLDVCLKAHWLSIEGCQPAIPENPPPAPKEQQKAEATEPLKSAKP
                     GQEEDGPLKGKGQGATTADGKGKEKKAPPLLEGAPLRLKPRSIHELSVEQQLYYKEIT
                     EACVGSCEAKRAEALQSIATDPGLYQMLPRFSTFISEGVRVNVVQNNLALLIYLMRMV
                     KALMDNPTLYLEKYVHELIPAVMTCIVSRQLCLRPDVDNHWALRDFAARLVAQICKHF
                     STTTNNIQSRITKTFTKSWVDEKTPWTTRYGSIAGLAELGHDVIKTLILPRLQQEGER
                     IRSVLDGPVLSNIDRIGADHVQSLLLKHCAPVLAKLRPPPDNQDAYRAEFGSLGPLLC
                     SQVVKARAQAALQAQQVNRTTLTITQPRPTLTLSQAPQPGPRTPGLLKVPGSIALPVQ
                     TLVSARAAAPPQPSPPPTKFIVMSSSSSAPSTQQVLSLSTSAPGSGSTTTSPVTTTVP
                     SVQPIVKLVSTATTAPPSTAPSGPGSVQKYIVVSLPPTGEGKGGPTSHPSPVPPPASS
                     PSPLSGSALCGGKQEAGDSPPPAPGTPKANGSQPNSGSPQPAP"
ORIGIN      
        1 gtcctcggcc cccgccccat tccgttcgcg ggtctccgtc tctccaccgg gggcttcatc
       61 cttccaggga ggagaagagg gactccagaa tggctgagga gaagaagctg aagcttagca
      121 acactgtgct gccctcggag tccatgaagg tggtggctga atccatgggc atcgcccaga
      181 ttcaggagga gacctgccag ctgctaacgg atgaggatgc cttgaagttc atgcacatgg
      241 ggaagcggca gaagctcacc accagtgaca ttgactacgc cttgaagcta aagaatgtcg
      301 agccactcta tggcttccac gcccaggagt tcattccttt ccgcttcgcc tctggtgggg
      361 gccgggagct ttacttctat gaggagaagg aggttgatct gagcgacatc atcaataccc
      421 ctctgccccg ggtgcccctg gacgtctgcc tcaaagctca ttggctgagc atcgagggct
      481 gccagccagc tatccccgag aacccgcccc cagctcccaa agagcaacag aaggctgaag
      541 ccacagaacc cctgaagtca gccaagccag gccaggagga agacggaccc ctgaagggca
      601 aaggtcaagg ggccaccaca gccgacggca aagggaaaga gaagaaggcg ccgcccttgc
      661 tggagggggc ccccttgcga ctgaagcccc ggagcatcca cgagttgtct gtggagcagc
      721 agctctacta caaggagatc accgaggcct gcgtgggctc ctgcgaggcc aagagggcgg
      781 aagccctgca aagcattgcc acggaccctg gactgtatca gatgctgcca cggttcagta
      841 cctttatctc ggagggggtc cgtgtgaacg tggttcagaa caacctggcc ctactcatct
      901 acctgatgcg tatggtgaaa gcgctgatgg acaaccccac gctctatcta gaaaaatacg
      961 tccatgagct gattccagct gtgatgacct gcatcgtgag cagacagttg tgcctgcgac
     1021 cagatgtgga caatcactgg gcactccgag actttgctgc ccgcctggtg gcccagatct
     1081 gcaagcattt tagcacaacc actaacaaca tccagtcccg gatcaccaag accttcacca
     1141 agagctgggt ggacgagaag acgccctgga cgactcgtta tggctccatc gcaggcttgg
     1201 ctgagctggg acacgatgtt atcaagactc tgattctgcc ccggctgcag caggaagggg
     1261 agcggatccg cagtgtgctg gacggccctg tgctgagcaa cattgaccgg attggagcag
     1321 accatgtgca gagcctcctg ctgaaacact gtgctcctgt tctggcaaag ctgcgcccac
     1381 cgcctgacaa tcaggacgcc tatcgggcag aattcgggtc ccttgggccc ctcctctgct
     1441 cccaggtggt caaggctcgg gcccaggctg ctctgcaggc tcagcaggtc aacaggacca
     1501 ctctgaccat cacgcagccc cggcccacgc tgaccctctc gcaggcccca cagcctggcc
     1561 ctcgcacccc tggcttgctg aaggttcctg gctccatcgc acttcctgtc cagacactgg
     1621 tgtctgcacg agcggctgcc ccaccacagc cttcccctcc tccaaccaag tttattgtaa
     1681 tgtcatcgtc ctccagcgcc ccatccaccc agcaggtcct gtccctcagc acctcggccc
     1741 ccggctcagg ttccaccacc acttcgcccg tcaccaccac cgtccccagc gtgcagccca
     1801 tcgtcaagtt ggtctccacc gccaccaccg caccccccag cactgctccc tctggtcctg
     1861 ggagtgtcca gaagtacatc gtggtctcac ttcccccaac aggggagggc aaaggaggcc
     1921 ccacctccca tccttctcca gttcctcccc cggcatcgtc cccgtcccca ctcagcggca
     1981 gtgccctttg tggggggaag caggaggctg gggacagtcc ccctccagct ccagggactc
     2041 caaaagccaa tggctcccag cccaactccg gctcccctca gcctgctccg tgatgctcca
     2101 cctgccagcc cccggattcc cacacatgca gacatgtaca cacgtgcacg tacacacatg
     2161 catgctcgct aagcggaagg aagttgtaga ttgcttcctt catgtcactt tctttttaga
     2221 tattgtacag ccagtttctc agaataaaag tttggtttgt aagttctga
//
