LOCUS       XM_047418083            6868 bp    mRNA    linear   PRI 25-AUG-2024
DEFINITION  PREDICTED: Homo sapiens synaptotagmin binding cytoplasmic RNA
            interacting protein (SYNCRIP), transcript variant X9, mRNA.
ACCESSION   XM_047418083
VERSION     XM_047418083.1
DBLINK      BioProject: PRJNA168
KEYWORDS    RefSeq.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000006.12) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001405.40-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/23/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6868
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /chromosome="6"
     gene            1..6868
                     /gene="SYNCRIP"
                     /gene_synonym="GRY-RBP; GRYRBP; hnRNP-Q; HNRNPQ; HNRPQ1;
                     NSAP1; PP68"
                     /note="synaptotagmin binding cytoplasmic RNA interacting
                     protein; Derived by automated computational analysis using
                     gene prediction method: Gnomon. Supporting evidence
                     includes similarity to: 1 mRNA, 77 ESTs, 2503 long SRA
                     reads, and 100% coverage of the annotated genomic feature
                     by RNAseq alignments, including 26 samples with support
                     for all annotated introns"
                     /db_xref="GeneID:10492"
                     /db_xref="HGNC:HGNC:16918"
                     /db_xref="MIM:616686"
     CDS             237..1757
                     /gene="SYNCRIP"
                     /gene_synonym="GRY-RBP; GRYRBP; hnRNP-Q; HNRNPQ; HNRPQ1;
                     NSAP1; PP68"
                     /codon_start=1
                     /product="heterogeneous nuclear ribonucleoprotein Q
                     isoform X6"
                     /protein_id="XP_047274039.1"
                     /db_xref="GeneID:10492"
                     /db_xref="HGNC:HGNC:16918"
                     /db_xref="MIM:616686"
                     /translation="MKTYRQREKQGTKVADSSKGPDEAKIKALLERTGYTLDVTTGQR
                     KYGGPPPDSVYSGQQPSVGTEIFVGKIPRDLFEDELVPLFEKAGPIWDLRLMMDPLTG
                     LNRGYAFVTFCTKEAAQEAVKLYNNHEIRSGKHIGVCISVANNRLFVGSIPKSKTKEQ
                     ILEEFSKVTEGLTDVILYHQPDDKKKNRGFCFLEYEDHKTAAQARRRLMSGKVKVWGN
                     VGTVEWADPIEDPDPEVMAKVKVLFVRNLANTVTEEILEKAFSQFGKLERVKKLKDYA
                     FIHFDERDGAVKAMEEMNGKDLEGENIEIVFAKPPDQKRKERKAQRQAAKNQMYDDYY
                     YYGPPHMPPPTRGRGRGGRGGYGYPPDYYGYEDYYDYYGYDYHNYRGGYEDPYYGYED
                     FQVGARGRGGRGARGAAPSRGRGAAPPRGRAGYSQRGGPGSARGVRGARGGAQQQRGR
                     GVRGARGGRGGNVGGKRKADGYNQPDSKRRQTNNQNWGSQPIAQQPLQGKRGRGRS"
ORIGIN      
        1 actcgcgccg gacacaggga gcagcgagca cgcgtttccc gcaacccgat accatcggac
       61 aggatttctc cgcctcagcc caacggggag ggctagttgc acatagtgat ttagatgaaa
      121 gagctattga agctttaaaa gaattcaatg aagacggtgc attggcagtt cttcaacagt
      181 ttaaagacag tgatctctct catgttcaga acaaaagtgc ctttttatgt ggagtcatga
      241 agacttacag gcagagagaa aaacaaggga ccaaagtagc agattctagt aaaggaccag
      301 atgaggcaaa aattaaggca ctcttggaaa gaacaggcta cacacttgat gtgaccactg
      361 gacagaggaa gtatggagga ccacctccag attccgttta ttcaggtcag cagccttctg
      421 ttggcactga gatatttgtg ggaaagatcc caagagatct atttgaggat gaacttgttc
      481 cattatttga gaaagctgga cctatatggg atcttcgtct aatgatggat ccactcactg
      541 gtctcaatag aggttatgcg tttgtcactt tttgtacaaa agaagcagct caggaggctg
      601 ttaaactgta taataatcat gaaattcgtt ctggaaaaca tattggtgtc tgcatctcag
      661 ttgccaacaa taggcttttt gtgggctcta ttcctaagag taaaaccaag gaacagattc
      721 ttgaagaatt tagcaaagta acagagggtc ttacagacgt cattttatac caccaaccgg
      781 atgacaagaa aaaaaacaga ggcttttgct ttcttgaata tgaagatcac aaaacagctg
      841 cccaggcaag gcgtaggtta atgagtggta aagtcaaggt ctgggggaat gttggaactg
      901 ttgaatgggc tgatcctata gaagatcctg atcctgaggt tatggcaaag gtaaaagtgc
      961 tgtttgtacg caaccttgcc aatactgtaa cagaagagat tttagaaaag gcatttagtc
     1021 agtttgggaa actggaacga gtgaagaagt taaaagatta tgcgttcatt cattttgatg
     1081 agcgagatgg tgctgtcaag gctatggaag aaatgaatgg caaagacttg gagggagaaa
     1141 atattgaaat tgtttttgcc aagccaccag atcagaaaag gaaagaaaga aaagctcaga
     1201 ggcaagcagc aaaaaatcaa atgtatgacg attactacta ttatggtcca cctcatatgc
     1261 cccctccaac aagaggtcga gggcgtggag gtagaggtgg ttatggatat cctccagatt
     1321 attatggata tgaagattat tatgattatt atggttatga ttaccataac tatcgtggtg
     1381 gatatgaaga tccatactat ggttatgaag attttcaagt tggagctaga ggaaggggtg
     1441 gtagaggagc aaggggtgct gctccatcca gaggtcgtgg ggctgctcct ccccgcggta
     1501 gagccggtta ttcacagaga ggaggtcctg gatcagcaag aggcgttcga ggtgcgagag
     1561 gaggtgccca acaacaaaga ggccgcgggg tacgtggtgc gaggggtggc cgcggtggaa
     1621 atgtaggagg aaagcgcaaa gctgatgggt acaaccagcc agattccaag cggcgccaga
     1681 ccaataatca gaactggggc tcccaaccca ttgctcagca accgctccaa gggaaaaggg
     1741 gtcgaggccg gtcctgacct gttacaatga agactgactt gctatgtggg attacaccag
     1801 aagcttgcag tggagtaatg gtaaggaaat caagcaacct taaatatgtc ggctgtatag
     1861 gagcatattc tattgcagaa gaccttccta tgaagatcat ggaatcaaat acgggacatt
     1921 gaactaatac ttggactttg atatgaattt ctttaacaat tttctctgca gtgcaagtta
     1981 ttaaactaaa gctactctat tttcaaaatg tgttccaaca gaaatccttc ataactccta
     2041 gcatggtatc ttaataaaga ataaagttct tttaaaaatc tgctctaagt agatttttcc
     2101 ccttttttaa attaaggatc ccaacagtgg tattttgaaa tattctcttg aatttgtgca
     2161 tttaaatttt attgcagtgg tatagatgaa tgccactgat ggtatcctta aattttattt
     2221 ctgctcacca aggttaatca tgattgtcta tatctttttt atagtgatca cttttgaatt
     2281 gtgttcagat atgcagtttc aggtgtaatc atcagagctg gttagtcagg cattccagat
     2341 agtggttctt ttcagaacct ttttaaaagg gttggttaac tacctcagta gcagaggatt
     2401 gaactatacc ctgtctgtac tgtacataga aaatctttgt agataaaagc aaggcttgtt
     2461 aaatatgata tgagggtaag attttaatat accaaatgta acattcttag ttgcctttag
     2521 tttcagaggc ttgtaagact tcctcatgac catcataaca ggccttgctt ttgtcgtatt
     2581 ttgtggctga aaaagcagcc ttgcttcttc agatattgta gttatttgga tgtataatag
     2641 tttagcaaga tgttactttt gtaagacatc agatgttcaa aaaagtgcat ccgaacttgt
     2701 actaaatact gcagtgtccc tttataaaaa gtcagactaa aactgacaat tgtacagcga
     2761 agcctgacat ttggatattt tgaagttttt tcataaatca tagaaattag tatatggctg
     2821 tagtttagct ttttaggtaa aaggtatgtt tcattagtgc atttcttcct gctgatcact
     2881 gtaaacatgt gaatcagctt tccatttctt atgcaggtca tgataacttg tagagtagag
     2941 tacaatcatt tgtgctatgt ttttaatttt ctaaagcacc ttgatgacag tgagtgtcca
     3001 gtggtgaagc atcctctatt gaaccaccct caaaaatttt tttgccaagt cctaagttga
     3061 tagcttaaag taaaaagtga aaattatagt ttcattagga cttggtgtaa agaaatcccc
     3121 tccccccttc cccaaaggga tactgcagtt atatcacata cccaataggc accacgatga
     3181 agatcagagc ttatacttaa ttaaggtttt atacacacca gttccccagt aaatgcaaat
     3241 ttaacaagaa aatcagacat gtcatatgtt caaaatgctc atggcaaaca atcattttgc
     3301 attcctgcaa ataaaattgt tttatactgt aagctggagg cgagtgtaac ttatttttgt
     3361 aataaagttt ttattttttt tatgtgtcat taatataaat gtgtgttagt gtagaaatct
     3421 tctggtttaa aaacttagaa ttgcacacat ttcagtatgt ttatttgtac ttacataatt
     3481 ttagaatagt ggttgccaat agcctgtatg tttcacatta attggttttt tgttatctaa
     3541 ataaatcatt ttagtatgtt gtatgtcagt tactgggata gctgggacat agagtgtaat
     3601 ttaaaatttg tcaataagta ttcattggaa tatatgtaaa tgtgccttgc cggttattga
     3661 aacttatcta caaaatgagt atggggtgac aaaaattagt tcctggtgct taatgaaact
     3721 ttctgccact gattttatat attaccccgt gcttttttaa agtacatctc tctcaaaact
     3781 tagtgtaagt ttgagggcta cacaaaacat ttacatttca ttctaacata atgaatataa
     3841 taggttgtgg aaagtgggta aactaaatgt agccttcagt aaaattgaat ctcagtgtaa
     3901 tccttggtgc tggcatttct cagttccgag gagttaaatg atcccatcta agaggtcatt
     3961 gccatgccta ttggcacttt actgtcatag catttttaag ggacactgtc aaggtgttta
     4021 agttctcaga attacttgtt gggattttag gacaggtttg tttacttaaa gtaagaactg
     4081 cattgtcaaa gttgaaagag gaacactttt gtgagttcac aaatgtgttc ttaagaaaac
     4141 attaaaatat ggagctctgg gttttcaaga ctatttggca ttcttaattt ggggacttgg
     4201 gagggaaact gataaaaaga aattgaagaa ttgatggtta tacttaaaga agggtaatgt
     4261 aaacagtggt gatgaaatat atacacatca agtgaaatta cttgacagtg ttcatttgaa
     4321 tgactttgaa ttcaagccat tataattact tttaaaatta aatatcattt gcactgttct
     4381 gataatgggt gcagtttttg agcaatataa tcagagctaa atatgcatgt agtgattagt
     4441 gatgtgaaca attaacgttc tgagaagaaa tactaactgt ggtattttca aacttaaatt
     4501 tctgtagtaa aatcagtatc aaagtcttat cagatcaagg aaaaacaggc aatgcatata
     4561 aacatacttt tgaatgttgt gtggcctata aagcaataat gcaatttata tggaatgtca
     4621 tgggatatga gaaatggaaa tgcaaaaata actaatcctt tagtaaaaat gtcaacatgt
     4681 taaaggggga atgttaacta atgtaggtta ttgctatttg tgatttgttt atgggttctt
     4741 ggctttgaca gcttcaaaga atggacagtg ataagttaaa agaaattttg tatattgtca
     4801 aggaaagggt cttaaatccg agtcaagtcc cttccttggg gtaaaaaatg tattcttaaa
     4861 gcattctgat gttaaaaaga aaacttaagt tatctaacca aaacagacgc aagattttgt
     4921 ttctgcagac tacttggcaa tcaaaagtga tcataaattt aggttatcag ttttcagaaa
     4981 gttgctttgt gagaaaattt tgttagatat attctcccaa gcatgctttt tgtggaaggt
     5041 tttcagccat tgccactgaa tcagatgtta aaaatgaagg gaaaattgag tgtgcacaca
     5101 cacaactgtt gtacactcat gattgcagtt tttagcttaa gaaacttttc taccagttac
     5161 tgtgaatctg acttaaaatg taaagtttcc tcatgataaa ataggaacaa catagaaatg
     5221 gattgatggg gtgatctgag ttattgtata taaaagtttt taaagaatag aatgaacatc
     5281 aagctagata ggcaaaaatt gacacattca gaacagcttt tttgactgcg aagccaaaag
     5341 ttgtcagaaa cagcaaaaga tcccttatta ttacagagta ttttacgtag tctctatttt
     5401 aaggagagaa attaaataga agggcttcat gcatttaggg gagggtgcta aaacttctca
     5461 agttcgtcaa acttacagga atacccacca tgatcatttt ctctctaatt atgtatacca
     5521 caaaattttc atctggccat aggaattcac tggtgggtgt aaaattaatg actaaagaaa
     5581 ttaagtgaca aatacataaa agaaacagac ttgtggggat attgttttaa ggtgtattaa
     5641 ttactcagtg atgataccac tcaatagggc atgccactac ttttcttaag atgctaatta
     5701 tgaagcagtg ctcacaggca ttttttaact agcaaattag tagatggact tttggggtct
     5761 gtcacttttt aaaagtattt aagacttaaa ttctattagc accacagtct gccttcagta
     5821 atacacctaa aatatttttc aggaccagaa gcattcagtt tgaaaatttg cagatgcaaa
     5881 ccagtattat tactaacgct ctgggtcaaa gattaggttt ttaatattaa cagtagtctg
     5941 gtaaatattt agaagtctgg cattgagaaa caaaagcttg tacctgacta gtatttttat
     6001 ttaaaaaaat tagttctgtt agcttattta aattgtgttt tatttatccg tagaatttat
     6061 atttatttca ttcctttcat ctcactgaaa actgtctgca ggccctttga tttggattag
     6121 atgtgtgaag tactgtcttt tgccaaaaac ctcaaattac ctgttctttt caacgtagtg
     6181 ggtttgtgct tgtttggaga tcagttcaaa aactatctgt actatctgta ctgcctctga
     6241 tgttaagatt ttatgtatag cataaggaag ctagctctga ctatattttc ctaagaataa
     6301 agacctattt ttgtagcatg tcttaggatc tccaggagtc caagaattat tgtgggtgtc
     6361 ctccaattca tcactcttca cttaacagct tttaagtaga cacttggaat ctttagaggt
     6421 ctgtcgccct ttgattatcc atacattcga agtaactagc caatggtgaa aaattcctca
     6481 agatatcctc agttgcaatc acattactgg aagatgaata gaataaatgt attaggctgg
     6541 tcttaatttt tgatggaaat attctgttgt cccgtacttg ccattggatt tgataaagtt
     6601 agtggtaatt tggaaagaat cggggacttg ccaatatatt tgtgggtttt agcttatacc
     6661 cctaggattt cttggttgcg ggacgagcag ttttggccac ttccatcagg acaagacttt
     6721 ttaggtcact tagtgcaggt tttagtttct attttggatt aacaacattt atattgatta
     6781 tcgaaaagaa gctttcatca tttcagaaca gtcctggaag tttgactttg agtgtgggag
     6841 aagtcctaat aaaccatttt ggaaatta
//
