LOCUS       NM_015551               4602 bp    mRNA    linear   PRI 16-JUN-2022
DEFINITION  Homo sapiens sushi domain containing 5 (SUSD5), mRNA.
ACCESSION   NM_015551 XM_171054 XM_940465
VERSION     NM_015551.2
KEYWORDS    RefSeq; MANE Select.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 4602)
  AUTHORS   Muzny DM, Scherer SE, Kaul R, Wang J, Yu J, Sudbrak R, Buhay CJ,
            Chen R, Cree A, Ding Y, Dugan-Rocha S, Gill R, Gunaratne P, Harris
            RA, Hawes AC, Hernandez J, Hodgson AV, Hume J, Jackson A, Khan ZM,
            Kovar-Smith C, Lewis LR, Lozado RJ, Metzker ML, Milosavljevic A,
            Miner GR, Morgan MB, Nazareth LV, Scott G, Sodergren E, Song XZ,
            Steffen D, Wei S, Wheeler DA, Wright MW, Worley KC, Yuan Y, Zhang
            Z, Adams CQ, Ansari-Lari MA, Ayele M, Brown MJ, Chen G, Chen Z,
            Clendenning J, Clerc-Blankenburg KP, Chen R, Chen Z, Davis C,
            Delgado O, Dinh HH, Dong W, Draper H, Ernst S, Fu G, Gonzalez-Garay
            ML, Garcia DK, Gillett W, Gu J, Hao B, Haugen E, Havlak P, He X,
            Hennig S, Hu S, Huang W, Jackson LR, Jacob LS, Kelly SH, Kube M,
            Levy R, Li Z, Liu B, Liu J, Liu W, Lu J, Maheshwari M, Nguyen BV,
            Okwuonu GO, Palmeiri A, Pasternak S, Perez LM, Phelps KA, Plopper
            FJ, Qiang B, Raymond C, Rodriguez R, Saenphimmachak C, Santibanez
            J, Shen H, Shen Y, Subramanian S, Tabor PE, Verduzco D, Waldron L,
            Wang J, Wang J, Wang Q, Williams GA, Wong GK, Yao Z, Zhang J, Zhang
            X, Zhao G, Zhou J, Zhou Y, Nelson D, Lehrach H, Reinhardt R, Naylor
            SL, Yang H, Olson M, Weinstock G and Gibbs RA.
  TITLE     The DNA sequence, annotation and analysis of human chromosome 3
  JOURNAL   Nature 440 (7088), 1194-1198 (2006)
   PUBMED   16641997
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AB011099.1 and AC123900.2.
            
            On Nov 22, 2018 this sequence version replaced NM_015551.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK295869.1, AB011099.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA2467146 [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            MANE Ensembl match     :: ENST00000309558.8/ ENSP00000308727.3
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
            COMPLETENESS: full length.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-130               AB011099.1         406-535
            131-131             AC123900.2         89297-89297         c
            132-827             AB011099.1         537-1232
            828-1999            AC123900.2         27843-29014         c
            2000-4600           AB011099.1         2405-5005
            4601-4602           AC123900.2         25240-25241         c
FEATURES             Location/Qualifiers
     source          1..4602
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /chromosome="3"
                     /map="3p22.3"
     gene            1..4602
                     /gene="SUSD5"
                     /note="sushi domain containing 5"
                     /db_xref="GeneID:26032"
                     /db_xref="HGNC:HGNC:29061"
                     /db_xref="MIM:619917"
     exon            1..125
                     /gene="SUSD5"
                     /inference="alignment:Splign:2.1.0"
     CDS             14..1903
                     /gene="SUSD5"
                     /note="sushi domain-containing protein 5"
                     /codon_start=1
                     /product="sushi domain-containing protein 5 precursor"
                     /protein_id="NP_056366.1"
                     /db_xref="CCDS:CCDS46787.1"
                     /db_xref="GeneID:26032"
                     /db_xref="HGNC:HGNC:29061"
                     /db_xref="MIM:619917"
                     /translation="MTAEGPSPPARWHRRLPGLWAAALLLLGLPRLSVRADGKFFVLE
                     SQNGSQGLQLEAARLSCKSRGAHLASADELRRVVQDCSFAVCTTGWLADGTLGTTVCS
                     KGSGEQQIMRAVDVRIESNPVPGGTYSALCIKDEEKPCGDPPSFPHTILQGRTGLEMG
                     DELLYVCAPGHIMGHRETAFTLLCNSCGEWYGLVQACGKDEAEAHIDYEDNFPDDRSV
                     SFRELMEDSRTEADEDRGQGDSSEEAPKQDRLVSISVGRENIARDKVFVPTTGLPGAG
                     SSVPADSPGSRLLQKHLFWFPAEAFHKPGLEKEVDDDTKKQFSAGDNHSGVKLVPGEP
                     ETKVIYGNTDGPSGPFVGKNDSKAGDPVVSSSDESWLDGYPVTEGAWRKTEAEEEEDG
                     DRGDGSVGLDENVLVTPDQPILVEVKKPKSSTLTPSEGMTHSSVLPSQMLDVEALALR
                     PVNASETEGIGDGDLTKYQSTLPWRFITEESPMATLSYELTSSTLEILTVNTVKQTPN
                     HIPSTIMATTQPPVETTVPEIQDSFPYLLSEDFFGQEGPGPGASEELHPTLESCVGDG
                     CPGLSRGPVIATIVTVLCLLLLLAGVGMVWGYRKCQHKSSVYKLNVGQRQARHYHQQI
                     EMEKV"
     exon            126..303
                     /gene="SUSD5"
                     /inference="alignment:Splign:2.1.0"
     exon            304..422
                     /gene="SUSD5"
                     /inference="alignment:Splign:2.1.0"
     exon            423..611
                     /gene="SUSD5"
                     /inference="alignment:Splign:2.1.0"
     exon            612..4602
                     /gene="SUSD5"
                     /inference="alignment:Splign:2.1.0"
     regulatory      4586..4591
                     /regulatory_class="polyA_signal_sequence"
                     /gene="SUSD5"
                     /note="hexamer: AATAAT"
     polyA_site      4602
                     /gene="SUSD5"
                     /note="major polyA site"
ORIGIN      
        1 gcactcccgg accatgactg ccgagggacc cagcccgcct gcccgttggc acagacgcct
       61 ccccgggctc tgggcggcgg cgctgctcct gctcggtctg ccgcgccttt cggtgcgggc
      121 ggatggaaag ttctttgtgc tggagtctca gaatggctct cagggcctac aactggaggc
      181 tgctcggctt tcctgcaaga gcaggggcgc tcacctggca tctgcagacg agctgcggag
      241 agtggtacag gattgctcct ttgcggtgtg caccactggc tggctagcag atggtactct
      301 tggaacaact gtgtgtagca aaggaagtgg agaacagcaa atcatgagag ctgtcgatgt
      361 gagaattgag agcaacccag ttcctggtgg cacatacagt gccctttgta ttaaggatga
      421 agagaagccg tgtggagacc cgccttcgtt cccacacacc atcctgcagg gccgcaccgg
      481 cttggaaatg ggggatgaac tgctgtacgt gtgtgcccca ggccacatca tgggccaccg
      541 ggagaccgcc ttcaccttgc tatgtaacag ctgtggggag tggtacggcc tggtgcaggc
      601 ctgtgggaaa gatgaggctg aggcacacat tgactatgaa gataacttcc ctgatgacag
      661 atctgtgtca ttcagagagc tcatggagga ttcccggaca gaggcagatg aggacagggg
      721 tcagggagac tcctctgagg aggctccaaa acaggaccgt ctggtctcca tttctgtggg
      781 gagagaaaac atagcccggg ataaagtctt tgtgccaacc acaggcttgc ctggtgctgg
      841 gagcagtgtc cccgcagatt caccaggatc acggctgctc cagaagcact tgttctggtt
      901 tcctgctgag gctttccaca agcctgggtt ggaaaaggag gtggatgatg acaccaaaaa
      961 gcagttttct gctggagaca accacagtgg tgtaaaattg gtcccaggtg aacctgaaac
     1021 caaggtgatc tacggcaaca ctgatggtcc ctcggggcca tttgtgggca agaatgacag
     1081 caaggcagga gatccagtgg tgagcagcag tgatgagtcc tggttagatg gctaccctgt
     1141 gacagagggg gcttggagga agacagaggc agaagaggaa gaagatgggg acagagggga
     1201 tgggtcagta gggctggatg aaaacgtcct agttactcct gatcagccca ttcttgtgga
     1261 agttaagaag cccaagagta gcaccctcac accaagcgag ggcatgaccc atagttcagt
     1321 tcttccatct caaatgctag atgtggaagc tttggcgctc agacccgtga atgcttccga
     1381 gactgagggc attggggatg gtgacttgac gaagtaccag tcaactctac cctggagatt
     1441 catcacagag gaatctccca tggccaccct gtcctatgag ctcaccagct ccaccctgga
     1501 gatattaaca gtgaacactg tcaagcagac acctaaccac atcccctcaa cgatcatggc
     1561 aaccacccag cctccagtag aaaccactgt tcctgagatc caggatagct tcccatacct
     1621 gctgtctgaa gacttctttg gacaggaagg ccccgggcca ggtgcaagtg aggagcttca
     1681 tcccaccttg gagtcgtgtg tgggggacgg atgtcctggc ctcagcagag gccctgtgat
     1741 cgccaccatt gtcaccgtcc tgtgcctact gctgctcctg gcaggtgtgg ggatggtgtg
     1801 gggctaccgc aagtgccagc acaagagctc tgtgtacaag ctgaatgttg gccagcggca
     1861 ggctcggcac taccaccagc agatcgagat ggagaaggtc taggcacctt tggagtgggt
     1921 tctcccaaag ccacttggga ggaaaataac tgtgacacat cacacgataa ttcactagag
     1981 catgacgcag gtggactgag gctcatcatt ttttcctcag ccctttgttt tataggctga
     2041 gaagtgtctc tggagcacct gggagggcag ggaggctttg gtgacatcat cactcatgtc
     2101 aatgtctcct ccaccatctg ccctggaatt gactacacta atcccagacc tgtgcttggg
     2161 ccctgtttcc agtgtgaggt caaaaatcgc ctcttccttc atcacagtat tatctttttt
     2221 tttttgagac agagtctcat gctgttgccc aggctggagt gcagtgtccc gatctgagct
     2281 cactgcaacc tctgcctccc aagttcaagc aattctcctg cctcagcctc ccaagtaggt
     2341 gggattacag gcatgcacca ccatgcccag ctaatttttt tatattttta gtagagatgg
     2401 agtttcacca tgttggccag gctggtcaag aactcctgac ctcaagtgat ctgccctcct
     2461 tagcctccca aagtgctagg attccaggtg tgagccacat cacagtatta cctttttgaa
     2521 gaaagaaaat caccagcttc atgccctgaa attttataaa tagtcatgat aaaccaagtg
     2581 tatgagagca gtattatcta ggacatggat attgaattat tgggagagga atatggaaga
     2641 ataatgggtt gtttcctttt aatgttgtga tgttgctgag ggcagatgaa ccaagagcca
     2701 ggacacagtc tagaagcttt gaggtttctt ttttcattgt ttcttgaaat tagaatttaa
     2761 gactgacatt ttgttggggg agttgaggag tgaagaaaca cacatccccc tctgttccct
     2821 ccattctgtg ggacagtctg tcatttattt tattttattt tcaatatttc atggttaagg
     2881 atttgccatt attttttaaa aacaaagtta gctttgtacc agtaagtacc atttcctctc
     2941 agaagcagtg gcctagttgt ccttgaccag tctgtgccta ggaatgtctt ggaatttttg
     3001 ccaggactaa caaaactcag tccttggttt cctctctcag gattaaccat ttctctgaac
     3061 tccagtaaga gagaatgaca cgggagaaaa aaaaaagaaa tgttttcaga gggccgaaca
     3121 ccaggttatc aagtatgggc acatacttga tggagaagca gaagaatctg tgaaagaata
     3181 tgaaatgatc tgtgctgatc tgttctctag tgtggaaact gggagctctg tggaaacaga
     3241 atccatcctg tctgttgggt aacccatttc gtagcatcta aatcatctta gggtggctca
     3301 gcgaggatgg tttatggcag tggttctcaa agtgtggtcc tcagaccagt agcatcagcg
     3361 tcacctggga atttgttgga gatgcaaatt ctctagtccc accctggact caggaaacag
     3421 gaaccctggg agtagggccc agttctgttt ttaacaagcc ctccaggtga ttttgatatg
     3481 cactcaagtt tgagagcctg ttggtttata ataatctcaa atgtgaactt cgaggccagc
     3541 tgaagcccta aaggcacaga tgagtatgtg gtgtgtgttg tgtggaagtc aggcatggct
     3601 gtgtgcagct gaggtggcat ttgaagctgc ctaaatgcca cctgcaatag tctcctgtat
     3661 gttggcacag aaatgaaaca tgttatattt ttctaatatg aatcaccttc ttagaaatag
     3721 ttatcagtgg taaaaagtga tgaatgcaac acatttattt tgagacacca tagcagtcta
     3781 agtgtttttg tgtggtagag ggaaatcctg atctttttta tgattgaaaa attgttggtg
     3841 gtgttttacc taaggaaaaa aaacattcgc aacatgtttt ctaccctgcc acctcttttc
     3901 agcaagcttt ggaaaagtaa taggcgaagt agctgtaaag agaggcagca taatcaaaga
     3961 tcttattccc catagttggg taaaataaag cctgaaggta ccaactagaa tacctgtgca
     4021 tcagacgaag tcaagaacaa taggaataaa atgctttctg catgtagcca aagcaaaaca
     4081 taatagaata aaagccagag actgtatata tttataaatt agatcctaat ctactgcaag
     4141 ataacttttc tatttttaac tatataaaat aacctctgtc tcagcattgg gactgtgtta
     4201 gcaactatta ttgtggaata acccagaaca ttggatttat accaacaaat aggcaatatt
     4261 aatacagtgt attaataaat ttattacaaa ttattaatac agtgtattaa taaatttatt
     4321 acaaattatt aatacaggta aatgttttat ttgtagacat ggactgtgaa ataaacccaa
     4381 cacatcagtt tttaagttct tattggtgtg gtatcctcta aattaatgtt atagaatcta
     4441 aaaattcatg ttgaaaggga atgattaaaa caatgtaaat ctaaattgta tgtcatgcat
     4501 gttttgagaa tggtgaatgt ttaatgctca tgaaaattgg gggagggggt tctattaaca
     4561 caaagcttct gagatattta aaataaataa ttattgcccc aa
//
