LOCUS       XM_047436596            6473 bp    mRNA    linear   PRI 25-AUG-2024
DEFINITION  PREDICTED: Homo sapiens SPT6 homolog, histone chaperone and
            transcription elongation factor (SUPT6H), transcript variant X2,
            mRNA.
ACCESSION   XM_047436596
VERSION     XM_047436596.1
DBLINK      BioProject: PRJNA168
KEYWORDS    RefSeq.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000017.11) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001405.40-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/23/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6473
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /chromosome="17"
     gene            1..6473
                     /gene="SUPT6H"
                     /gene_synonym="emb-5; SPT6; SPT6H"
                     /note="SPT6 homolog, histone chaperone and transcription
                     elongation factor; Derived by automated computational
                     analysis using gene prediction method: Gnomon. Supporting
                     evidence includes similarity to: 8 mRNAs, 209 ESTs, 1686
                     long SRA reads, 10 Proteins, and 100% coverage of the
                     annotated genomic feature by RNAseq alignments, including
                     17 samples with support for all annotated introns"
                     /db_xref="GeneID:6830"
                     /db_xref="HGNC:HGNC:11470"
                     /db_xref="MIM:601333"
     CDS             239..5419
                     /gene="SUPT6H"
                     /gene_synonym="emb-5; SPT6; SPT6H"
                     /codon_start=1
                     /product="transcription elongation factor SPT6 isoform X1"
                     /protein_id="XP_047292552.1"
                     /db_xref="GeneID:6830"
                     /db_xref="HGNC:HGNC:11470"
                     /db_xref="MIM:601333"
                     /translation="MSDFVESEAEESEEEYNDEGEVVPRVTKKFVEEEDDDEEEEEEN
                     LDDQDEQGNLKGFINDDDDEDEGEEDEGSDSGDSEDDVGHKKRKRTSFDDRLEDDDFD
                     LIEENLGVKVKRGQKYRRVKKMSDDEDDDEEEYGKEEHEKEAIAEEIFQDGEGEEGQE
                     AMEAPMAPPEEEEEDDEESDIDDFIVDDDGQPLKKPKWRKKLPGYTDAALQEAQEIFG
                     VDFDYDEFEKYNEYDEELEEEYEYEDDEAEGEIRVRPKKTTKKRVSRRSIFEMYEPSE
                     LESSHLTDQDNEIRATDLPERFQLRSIPVKGAEDDELEEEADWIYRNAFATPTISLQE
                     SCDYLDRGQPASSFSRKGPSTIQKIKEALGFMRNQHFEVPFIAFYRKEYVEPELHIND
                     LWRVWQWDEKWTQLRIRKENLTRLFEKMQAYQYEQISADPDKPLADGIRALDTTDMER
                     LKDVQSMDELKDVYNHFLLYYGRDIPKMQNAAKASRKKLKRVREEGDEEGEGDEAEDE
                     EQRGPELKQASRRDMYTICQSAGLDGLAKKFGLTPEQFGENLRDSYQRHETEQFPAEP
                     LELAKDYVCSQFPTPEAVLEGARYMVALQIAREPLVRQVLRQTFQERAKLNITPTKKG
                     RKDVDEAHYAYSFKYLKNKPVKELRDDQFLKICLAEDEGLLTTDISIDLKGVEGYGND
                     QTYFEEIKQFYYRDEFSHQVQEWNRQRTMAIERALQQFLYVQMAKELKNKLLAEAKEY
                     VIKACSRKLYNWLRVAPYRPDQQVEEDDDFMDENQGKGIRVLGIAFSSARDHPVFCAL
                     VNGEGEVTDFLRLPHFTKRRTAWREEEREKKAQDIETLKKFLLNKKPHVVTVAGENRD
                     AQMLIEDVKRIVHELDQGQQLSSIGVELVDNELAILYMNSKKSEAEFRDYPPVLRQAV
                     SLARRIQDPLIEFAQVCSSDEDILCLKFHPLQEHVVKEELLNALYCEFINRVNEVGVD
                     VNRAIAHPYSQALIQYVCGLGPRKGTHLLKILKQNNTRLESRTQLVTMCHMGPKVFMN
                     CAGFLKIDTASLGDSTDSYIEVLDGSRVHPETYEWARKMAVDALEYDESAEDANPAGA
                     LEEILENPERLKDLDLDAFAEELERQGYGDKHITLYDIRAELSCRYKDLRTAYRSPNT
                     EEIFNMLTKETPETFYIGKLIICNVTGIAHRRPQGESYDQAIRNDETGLWQCPFCQQD
                     NFPELSEVWNHFDSGSCPGQAIGVKTRLDNGVTGFIPTKFLSDKVVKRPEERVKVGMT
                     VHCRIMKIDIEKFSADLTCRTSDLMDRNNEWKLPKDTYYDFDAEAADHKQEEDMKRKQ
                     QRTTYIKRVIAHPSFHNINFKQAEKMMETMDQGDVIIRPSSKGENHLTVTWKVSDGIY
                     QHVDVREEGKENAFSLGATLWINSEEFEDLDEIVARYVQPMASFARDLLNHKYYQDCS
                     GGDRKKLEELLIKTKKEKPTFIPYFICACKELPGKFLLGYQPRGKPRIEYVTVTPEGF
                     RYRGQIFPTVNGLFRWFKDHYQDPVPGITPSSSSRTRTPASINATPANINLADLTRAV
                     NALPQNMTSQMFSAIAAVTGQGQNPNATPAQWASSQYGYGGSGGGSSAYHVFPTPAQQ
                     PVATPLMTPSYSYTTPSQPITTPQYHQLQASTTPQSAQAQPQPSSSSRQRQQQPKSNS
                     HAAIDWGKMAEQWLQEKEAERRKQKQRLTPRPSPSPMIESTPMSIAGDATPLLDEMDR
                     "
ORIGIN      
        1 gttgacgcag cagcggcggc ggtggcggcg gaggggccgt gcggtgggtc cgtactatct
       61 tttcccagtc tcggttcgac gactccattt tcctcggtgg gggcttagcg cactggagga
      121 gcggcgggct tcagacaggt ttttaaaact gggccacgca aaaggattgg ggatggaagg
      181 gacctggggc ttctgagcca ggatcagtta tcttcaggca gagtgagaag ctgcagcaat
      241 gtctgatttt gtggaaagcg aggctgagga gtcagaggaa gaatacaatg atgaaggcga
      301 ggtggtaccc cgagtcacca agaaatttgt ggaagaggag gatgatgatg aggaggagga
      361 ggaggagaac ctagatgatc aggatgagca aggcaacttg aaaggcttta tcaatgacga
      421 tgatgatgaa gatgaagggg aggaggatga gggcagtgac tctggtgatt cagaagatga
      481 tgttggccac aagaagagaa aacgcacctc ttttgatgac cgcctggagg atgatgattt
      541 tgacctcatt gaggagaatt tgggtgtcaa agtcaaaaga ggacaaaagt accggcgtgt
      601 caaaaaaatg tcagatgacg aggacgatga cgaggaggaa tatggcaagg aggaacatga
      661 aaaagaagct attgcggaag aaatcttcca ggatggggaa ggggaagaag ggcaggaggc
      721 catggaggcc cccatggctc ctccagagga ggaggaagaa gatgatgagg agtcagatat
      781 tgacgacttc attgtggatg atgatggaca gcctctgaaa aaacctaagt ggcggaaaaa
      841 gcttcctgga tacacagacg cggccctgca agaagcccag gaaatcttcg gtgtggactt
      901 tgactatgat gaatttgaga aatacaatga gtatgatgaa gaactggagg aagagtatga
      961 gtatgaggat gatgaggctg agggtgaaat ccgagtgcgc cccaagaaga ccaccaagaa
     1021 gcgtgtgagc cgtaggagca tctttgaaat gtatgagccc agtgagctag aaagcagcca
     1081 cctcacagat caggacaatg aaatccgagc cactgacctg cctgagaggt tccagctccg
     1141 ctccatccca gtcaaggggg ctgaagatga tgaactagaa gaagaagctg actggatcta
     1201 caggaatgct tttgccacac caaccatttc tctccaggaa agctgtgatt acctagaccg
     1261 agggcagcca gccagcagct tcagtcggaa agggcccagc acaattcaga agatcaaaga
     1321 ggccctgggc ttcatgcgaa atcagcattt tgaggtgcct tttattgcct tctatcgaaa
     1381 ggagtatgtg gagcctgagt tgcacatcaa tgacctatgg agagtctggc agtgggatga
     1441 aaagtggacc cagctgcgga tccgtaaaga gaacctaaca cggctgtttg agaagatgca
     1501 ggcttatcag tatgaacaga tctctgctga ccctgacaaa cctcttgctg atggcatccg
     1561 ggctctggac accactgaca tggagaggct caaggatgtc caatcaatgg atgagctgaa
     1621 agatgtctac aaccattttc ttctttatta tggccgagac atccctaaga tgcagaacgc
     1681 cgccaaagct agccgcaaga agctgaagcg tgtcagggaa gagggagatg aagaaggtga
     1741 aggtgacgag gcagaagatg aggagcagag ggggcctgag ctcaagcaag cctctcgccg
     1801 agacatgtac accatctgcc agagtgctgg gctagatggc ctggccaaaa agtttgggct
     1861 tactcccgag cagtttgggg agaacctgcg ggatagctac cagcggcacg agacagagca
     1921 gtttcccgcg gagcccttgg agctggccaa ggattacgtt tgcagccagt tccctactcc
     1981 agaagctgtg ctagaaggcg cccgctacat ggtagccctg cagattgccc gtgagcccct
     2041 tgtccggcag gtgctgaggc aaaccttcca agagagagcc aagttaaata taacccccac
     2101 caagaaaggt agaaaggatg tggatgaggc ccactatgcc tattccttca agtatttaaa
     2161 gaacaagcct gttaaggaac tgagagatga ccagtttctc aagatatgcc tggctgaaga
     2221 cgaagggctc ctcaccactg acatcagcat agatttgaag ggagtggaag gctatggcaa
     2281 cgaccagaca tattttgagg agataaaaca gttttactac cgagatgagt tcagccacca
     2341 ggtgcaggag tggaaccggc agcgcaccat ggccatcgaa cgggctttac agcagttcct
     2401 ctatgtgcag atggccaaag aactcaagaa caagctgctg gctgaagcca aggaatatgt
     2461 cataaaggcc tgtagtcgaa agctctacaa ttggttgaga gtggcaccct accgaccaga
     2521 tcagcaggtg gaagaagatg acgactttat ggacgagaac caagggaagg gcattcgagt
     2581 cctcggcatt gctttctcct ctgccagaga tcaccctgtg ttctgcgccc tggtcaatgg
     2641 tgaaggagaa gtgacagact tccttcgact gccccatttt accaaacggc gaactgcatg
     2701 gagagaggaa gagcgggaaa agaaggctca agacattgaa acgctaaaga aatttctcct
     2761 gaataagaag cctcatgtag tgacagttgc aggagagaac agggacgccc agatgttgat
     2821 tgaagatgtg aagcgcattg tacatgagct ggaccagggc cagcagctgt catctattgg
     2881 ggtagagctg gttgacaacg agttggccat tctctatatg aacagcaaga agtcagaggc
     2941 agagttccgg gattatcctc cagtgctgag acaggccgtc tccctggccc ggcgcatcca
     3001 ggaccctctg attgaatttg cccaggtgtg cagttccgat gaagacatcc tgtgtctcaa
     3061 gtttcacccc ttgcaggagc atgtggtgaa agaggagctg ctcaacgcct tgtactgtga
     3121 atttatcaac cgagtcaatg aggtcggggt cgatgtcaac cgtgccattg cccaccctta
     3181 cagccaggcc ttgatccagt atgtttgtgg cctgggacct cggaaaggga cccacctcct
     3241 gaagatcctg aagcagaaca acacccggct cgagagccgg acccagctgg tcaccatgtg
     3301 ccacatgggt cccaaagtct tcatgaattg tgctggcttc ctcaagatcg acacggcctc
     3361 cctgggggac agcactgact catatattga agtccttgat ggttcccgtg tccaccctga
     3421 gacttatgag tgggctagga agatggcagt ggatgccctg gaatacgatg aatcagccga
     3481 ggatgccaat cctgcaggag cccttgaaga aatcttggaa aacccagagc gactgaaaga
     3541 cctggacctt gatgcctttg cagaagagct ggagaggcag ggctatggtg acaaacacat
     3601 cacactctat gacatccggg cagagctgag ctgtcgatat aaggacctcc ggacagccta
     3661 ccgctctccc aacacagagg agatcttcaa tatgttaacc aaagaaacac cagagacctt
     3721 ctacattgga aagctcatca tctgcaatgt cactggcatt gcccacaggc gtccccaggg
     3781 tgagagctat gaccaggcga tccgcaatga tgagacaggg ctgtggcagt gccccttctg
     3841 tcagcaggac aatttccctg aactaagcga ggtgtggaac cactttgaca gcggttcgtg
     3901 cccaggccag gccatcggtg tcaaaacacg gctagacaat ggtgtcaccg gcttcatccc
     3961 caccaaattc ctcagtgaca aagtggtaaa gcggccagaa gaacgagtga aggtgggaat
     4021 gactgttcac tgccgcatca tgaagattga cattgagaag ttcagtgcag acctgacctg
     4081 ccgcacctca gacctcatgg acaggaacaa tgagtggaag ctgcccaaag acacctacta
     4141 tgactttgat gctgaagctg cagaccacaa gcaggaggag gacatgaagc ggaagcagca
     4201 gcggaccaca tacatcaaga gagtgatcgc acacccatcc ttccataata tcaatttcaa
     4261 gcaagcagaa aagatgatgg agaccatgga ccagggtgat gtgattatcc gaccaagcag
     4321 caagggcgag aaccacctga cagtgacctg gaaagtcagt gatggcatct accagcatgt
     4381 ggatgtgcgg gaggagggca aggaaaatgc cttcagcctg ggagccactc tgtggatcaa
     4441 cagtgaggaa ttcgaagatt tggatgagat tgttgctcgc tatgtccagc ccatggcatc
     4501 ctttgcccgg gaccttctga atcacaagta ttatcaggac tgcagcggtg gggaccgcaa
     4561 gaaattagag gagctgctca tcaaaactaa gaaggagaag cccaccttca tcccttattt
     4621 catctgtgcc tgcaaggaac tgcccggcaa gttcctactg ggataccagc cccggggtaa
     4681 acccaggata gaatatgtaa cggtgactcc agagggattc cggtaccggg gccagatctt
     4741 cccaaccgtg aatggactgt ttagatggtt taaggatcac taccaggatc ctgtaccagg
     4801 catcacccct agcagcagca gcaggacccg gacacctgcc tctatcaatg ctaccccagc
     4861 caacatcaac cttgcagatc tgacacgggc tgtgaatgcc ctgcctcaga acatgacttc
     4921 acagatgttc agtgccattg ctgcggtgac aggccaagga cagaacccta atgccacccc
     4981 agcccagtgg gcctccagcc agtacggcta tggcggcagt ggaggcggca gcagtgctta
     5041 ccacgtattc ccaacgccag cccagcagcc agtggccaca ccactaatga cccctagcta
     5101 ctcctacacg accccaagcc agcccatcac cacccctcag taccaccagc tccaggccag
     5161 caccacccca cagtcggccc aggcccagcc ccagccctct tccagctccc ggcaacggca
     5221 gcagcagcca aagtccaaca gccatgcagc catcgactgg ggaaaaatgg cggagcagtg
     5281 gctgcaggaa aaggaggcag aacggcggaa acagaagcag cggctgacac ctcggccctc
     5341 ccccagcccc atgatcgaaa gcacccccat gtccattgct ggcgatgcca ccccactcct
     5401 ggacgagatg gatcggtagg gggcctgctc ctcggactct ggttacctct gaggctggga
     5461 aaggcctggc tgcccactgc ctccctccct gcccctcctt ttatgtccat aaagtggcgt
     5521 gaagtgagac gttctctttg gtggtcaacc cggatgggtg acaggctgga tggccttgtg
     5581 aacttgagct cagtgtatgc taggcaacaa ttctcccgct ccagaccctc accgaccacc
     5641 tgtcctggga ccaggctggg aggggagtgt ggcagggagg aggaagagga aggtgagaat
     5701 gagtagaaca gttttgtatt ctactcccta caagccattt tgaacttctg ccctcaccgg
     5761 actctgggct gtgactgggg caccaaactc agcacatgag tctcccctag ctctcgtggg
     5821 gagagggatg ctatttattc agtttggggc aggagggaga ggagggaaag tatttctgac
     5881 cctgatgcca acagccgggt ggctgtccaa gcaggattgc aggggacaca gggaagcact
     5941 gcccagcccc tgcctggctg ccctttcccc cctgctgctg ccaccgcttc ctgcctgtca
     6001 tttgaataaa cagtgtttct attgagctct tgccaaagcc tctctctcca actctccagc
     6061 tctttgaggg gtggctttca aagcagtgtt tggagctcca aggactcccc tgactccctc
     6121 ttctgatcca tcagaggcaa agattcatag actagaggca gcttctacat cagactgcct
     6181 ggggcacatc cctgctctac ttcccagccg ggtgaccctg tgccagttcc tgctgccttt
     6241 cagctggctt tcttacctgt aacatggaga tagtgatacc tgcctcatca gctgctgtga
     6301 ggaccaaggc agcgtgtgca agctccttgg cccaacgcct ggtacgtcgc aaatgttacc
     6361 cggtattatt acacccactc actcacccac agcacagctg ccccatccgc ccatgcctgc
     6421 tggtcttctc tggcaccctg gagaaaggcc acaagtaaat ctggatttct caa
//
