LOCUS       XM_047430453            2987 bp    mRNA    linear   PRI 25-AUG-2024
DEFINITION  PREDICTED: Homo sapiens SPT20 homolog, SAGA complex component
            (SUPT20H), transcript variant X20, mRNA.
ACCESSION   XM_047430453
VERSION     XM_047430453.1
DBLINK      BioProject: PRJNA168
KEYWORDS    RefSeq.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000013.11) annotated using gene prediction method: Gnomon,
            supported by EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001405.40-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/23/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2987
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /chromosome="13"
     gene            1..2987
                     /gene="SUPT20H"
                     /gene_synonym="C13; C13orf19; FAM48A; FP757; P38IP; SPT20"
                     /note="SPT20 homolog, SAGA complex component; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 56 ESTs, 322 long SRA reads, and 100% coverage of the
                     annotated genomic feature by RNAseq alignments, including
                     119 samples with support for all annotated introns"
                     /db_xref="GeneID:55578"
                     /db_xref="HGNC:HGNC:20596"
                     /db_xref="MIM:613417"
     CDS             224..2590
                     /gene="SUPT20H"
                     /gene_synonym="C13; C13orf19; FAM48A; FP757; P38IP; SPT20"
                     /codon_start=1
                     /product="transcription factor SPT20 homolog isoform X15"
                     /protein_id="XP_047286409.1"
                     /db_xref="GeneID:55578"
                     /db_xref="HGNC:HGNC:20596"
                     /db_xref="MIM:613417"
                     /translation="MYVIESARQRPPKRKYLSSGRKSVFQKLYDLYIEECEKEPEVKQ
                     KLRRNVNLLEKLVMQETLSCLVVNLYPGNEGYSLMLRGKNGSDSETIRLPYEEGELLE
                     YLDAEELPPILVDLLEKSQVNIFHCGCVIAEIRDYRQSSNMKSPGYQSRHILLRPTMQ
                     TLICDVHSITSDNHKWTQEDKLLLESQLILATAEPLCLDPSIAVTCTANRLLYNKQKM
                     NTRPMKRCFKRYSRSSLNRQQDLSHCPPPPQLRLLDFLQKRKERKAGQHYDLKISKAG
                     NCVDMWKRSPCNLAIPSEVDVEKYAKVEKSIKSDDSQPTVWPAHDVKDDYVFECEAGT
                     QYQKTKLTILQSLGDPLYYGKIQPCKADEESDSQMSPSHSSTDDHSNWFIIGSKTDAE
                     RVVNQYQELVQNEAKCPVKMSHSSSGSASLSQVSPGKETDQTETVSVQSSVLGKGVKH
                     RPPPIKLPSSSGNSSSGNYFTPQQTSSFLKSPTPPPSSKPSSIPRKSSVDLNQVSMLS
                     PAALSPASSSQRSGTPKPSTPTPTPSSTPHPPDAQSSTPSTPSATPTPQDSGFTPQPT
                     LLTQFAQQQRSLSQAMPVTTIPLSTMVTSITPGTTATQVMANSAGLNFINVVGSVCGA
                     QALMSGSNPMLGCNTGAITPAGINLSGLLPSGGLLPNALPSAMQAASQAGVPFGLKNT
                     SSLRPLNLLQQQQQQLSQFTPQQPQQPTTCSPQQPGEQGSEQGSTSQEQALSAQQAAV
                     INLTGVGSFMQSQAAAVAILAASNGYGSSSSTNSSATSSSAYRQPVKK"
ORIGIN      
        1 aatcggaagt gcggccgccg gaactggctg ttggtggggg tgcagcactg agccgccgac
       61 ggggcgggtg ggctttgctg ccgagcaggc ggcgccgtct tggggcctag cggcgaggcg
      121 acccgcacag tactgtaaga ttgatgttaa aggcatggtg ttcaccccac ttcatcagcg
      181 tacataagtt atctcttctt ttggaccctt attttatgcc ataatgtatg tcattgaaag
      241 tgcccgacag agacctccta aaaggaaata cctatcaagt ggaagaaaat ctgtatttca
      301 aaaactttat gacttgtata ttgaagaatg tgaaaaagaa cctgaagtta agcagaaatt
      361 aagaagaaat gtgaacttgt tagagaagct tgttatgcaa gagactttgt catgtttagt
      421 ggtcaatcta tacccaggaa atgagggata ttctctgatg ctcaggggaa aaaacggatc
      481 agattccgag accattcgac tgccctatga agaaggagag ttgcttgaat atttggatgc
      541 agaagaatta cctcctattt tggttgatct cctagaaaaa tctcaggtta atatttttca
      601 ttgcggatgt gtcatagcag aaatacgtga ctacaggcag tccagtaaca tgaaatctcc
      661 tggttaccaa agtcggcaca ttctcttacg tccaacaatg cagactttaa tttgtgatgt
      721 acattcaata acaagtgata accacaaatg gacccaggaa gacaaacttt tgcttgagag
      781 ccagctcatc ctagctacag ctgaaccact ctgtcttgat ccttctatag cagtcacctg
      841 cactgcaaac agactgctct ataacaagca aaagatgaac actcgcccaa tgaaacggtg
      901 tttcaagagg tattccagat cctctctgaa tcggcagcaa gatctatctc attgtccacc
      961 tcctcctcag ctgaggttac ttgatttctt acaaaaaaga aaggaaagaa aagcaggtca
     1021 gcattatgac ctcaaaattt ctaaggcagg aaattgtgta gatatgtgga aacggagtcc
     1081 ctgtaatttg gccatacctt ctgaagtaga tgtggagaaa tatgctaaag tggaaaagtc
     1141 tatcaaatct gatgactcac agccaacagt ctggccagcc catgatgtaa aagatgatta
     1201 tgtatttgaa tgtgaagctg gtactcagta tcagaaaaca aagctgacca tcttgcagtc
     1261 gcttggagat ccactttact atggtaaaat acagccatgt aaagcagatg aagaaagtga
     1321 cagccagatg tctccatcac actcgtccac agatgatcat tcaaattggt tcattattgg
     1381 atcaaagacc gatgctgaga gggtagtcaa tcagtaccaa gaattagtcc agaatgaagc
     1441 caaatgtccg gtcaagatgt cacacagctc cagtggctca gccagtctga gtcaggtttc
     1501 tccagggaaa gaaacagatc aaactgaaac cgtgtcagtt cagtcttcgg tattggggaa
     1561 gggtgtaaaa catcgacccc caccaatcaa acttccctca agctcaggaa atagttcctc
     1621 aggtaactat tttacaccac aacagacaag cagctttctc aaatctccaa ctcctcctcc
     1681 ttcttctaag ccatcaagta ttcctcggaa atcatctgtg gatctcaatc aagttagcat
     1741 gctttctcca gctgccctat cacctgccag ctcatcacaa agatctggaa ctcctaagcc
     1801 atctactcct acaccaaccc cttcatcgac cccacaccct cctgatgctc agagctcaac
     1861 tcctagtacc ccttcagcca cccctactcc ccaagattca ggcttcaccc ctcagcccac
     1921 tttgttaact cagtttgctc agcagcaaag gtctctgagc caggcaatgc ctgtaacaac
     1981 cattcctctt tccaccatgg taacatctat aactccagga accacggcca cccaggtcat
     2041 ggcaaactct gctggactta acttcatcaa tgtagtgggc tctgtttgtg gggcccaggc
     2101 tttgatgagt ggttcaaacc ccatgctggg ctgtaacact ggtgccataa ctcctgcagg
     2161 aataaacctg agcggccttc taccctcagg aggtctgcta ccaaatgcac tgcccagtgc
     2221 aatgcaggca gcttctcaag caggtgttcc atttggttta aaaaatactt caagtctcag
     2281 gcccttaaat ctactccagc agcagcaaca gcagctctcc cagtttacac cacaacaacc
     2341 tcagcagccc acaacttgta gtcctcaaca gccaggggag cagggttctg agcaaggttc
     2401 aaccagtcaa gaacaggcct tatctgctca gcaagctgct gttattaacc ttactggagt
     2461 aggaagtttt atgcagtcac aggcagctgc agttgcgatt cttgcagcat caaatggcta
     2521 tggcagcagc agcagcacaa acagctcagc tacatcatca tcggcataca ggcagccagt
     2581 caaaaagtaa aatgaagaga ggcacgccaa ccactccaaa attttgagtc ttgcattact
     2641 ttttgttcct tttttaaaaa cacaagagca ctgaatcaaa agaattgagt ttctactttt
     2701 tgtttttttt aatgtgtcag tattttacat tgctagatgt acaaacttta tacagaagca
     2761 caaccttatc atttttaaat aaaaacaggg aaatggttta acaaactagg gttggtttgc
     2821 ctaagtcatt gctttttaaa aatggtttca ctatacataa tatatatgga agtgacctaa
     2881 gaaataatag aaacatcttt cagaagaatg tagtttgata tttatttagt ataaaacgtt
     2941 tgtgcacagt gttaacaaat acaattttta caaatctgtt ttgaaaa
//
