LOCUS       XM_047436970            1794 bp    mRNA    linear   PRI 25-AUG-2024
DEFINITION  PREDICTED: Homo sapiens slingshot protein phosphatase 2 (SSH2),
            transcript variant X7, mRNA.
ACCESSION   XM_047436970
VERSION     XM_047436970.1
DBLINK      BioProject: PRJNA168
KEYWORDS    RefSeq.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000017.11) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001405.40-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/23/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1794
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /chromosome="17"
     gene            1..1794
                     /gene="SSH2"
                     /gene_synonym="SSH-2; SSH-2L"
                     /note="slingshot protein phosphatase 2; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 5 mRNAs, 3 ESTs, 33 long SRA reads, 4 Proteins, and
                     99% coverage of the annotated genomic feature by RNAseq
                     alignments, including 9 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:85464"
                     /db_xref="HGNC:HGNC:30580"
                     /db_xref="MIM:606779"
     CDS             229..1737
                     /gene="SSH2"
                     /gene_synonym="SSH-2; SSH-2L"
                     /codon_start=1
                     /product="protein phosphatase Slingshot homolog 2 isoform
                     X9"
                     /protein_id="XP_047292926.1"
                     /db_xref="GeneID:85464"
                     /db_xref="HGNC:HGNC:30580"
                     /db_xref="MIM:606779"
                     /translation="MALVTVQRSPTPSTTSSPCASEADSGEEECRSQPRSISESFLTV
                     KGAALFLPRGNGSSTPRISHRRNKHAGDLQQHLQAMFILLRPEDNIRLAVRLESTYQN
                     RTRYMVVVSTNGRQDTEESIVLGMDFSSNDSSTCTMGLVLPLWSDTLIHLDGDGGFSV
                     STDNRVHIFKPVSVQAMWSALQSLHKACEVARAHNYYPGSLFLTWVSYYESHINSDQS
                     SVNEWNAMQDVQSHRPDSPALFTDIPTERERTERLIKTKLREIMMQKDLENITSKEIR
                     TELEMQMVCNLREFKEFIDNEMIVILGQMDSPTQIFEHVFLGSEWNASNLEDLQNRGV
                     RYILNVTREIDNFFPGVFEYHNIRVYDEEATDLLAYWNDTYKFISKAKKHGSKCLVHC
                     KMGVSRSASTVIAYAMKEYGWNLDRAYDYVKERRTVTKPNPSFMRQLEEYQGILLASF
                     LGLIHGGRDKPWGEKSTEFESVDLVSIPGSPSCCNPEKLLHISHPYLTPSIK"
     polyA_site      1794
                     /gene="SSH2"
                     /gene_synonym="SSH-2; SSH-2L"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 attgtgcccc gcagctgcgg aaccgcccgc ccgccgcccg ttcggagcgt cagtcggcga
       61 cagtctggtg gtgggtgcgg agtctgcggc cgttcccgcg gcctcctcct cctccccgtt
      121 cccttcaccc ccaccccgca cccctttccc catcccggct ccgtcaccct cccgtccccc
      181 acactcagga caagaatgcc ctgcccggaa caacccagca gcgcctagat ggctttggtc
      241 acggtccagc ggtcacctac ccccagcacc acctccagcc cctgcgcctc ggaggcagac
      301 agtggggagg aagaatgccg gtcacagccc aggagcatca gcgagagctt tctaactgtc
      361 aaaggtgctg ccctttttct accacgggga aatggctcat ccacaccaag aatcagccac
      421 agacggaaca agcatgcagg cgatctccaa cagcatctcc aagcaatgtt cattttactc
      481 cgcccagaag acaacatcag gctggctgta agactggaaa gtacttacca gaatcgaaca
      541 cgctatatgg tagtggtttc aactaatggt agacaagaca ctgaagaaag catcgtccta
      601 ggaatggatt tctcctctaa tgacagtagc acttgtacca tgggcttagt tttgcctctc
      661 tggagcgaca cgctaattca tttggatggt gatggtgggt tcagtgtatc gacggataac
      721 agagttcaca tattcaaacc tgtatctgtg caggcaatgt ggtctgcact acagagctta
      781 cacaaggctt gtgaagtcgc cagagcgcat aactactacc caggcagcct atttctcact
      841 tgggtgagtt attatgagag ccatatcaac tcagatcaat cctcagtcaa tgaatggaat
      901 gcaatgcaag atgtacagtc ccaccggccc gactctccag ctctcttcac cgacatacct
      961 actgaacgtg aacgaacaga aaggctaatt aaaaccaaat taagggagat catgatgcag
     1021 aaggatttgg agaatattac atccaaagag ataagaacag agttggaaat gcaaatggtg
     1081 tgcaacttgc gggaattcaa ggaatttata gacaatgaaa tgatagtgat ccttggtcaa
     1141 atggatagcc ctacacagat atttgagcat gtgttcctgg gctcagaatg gaatgcctcc
     1201 aacttagagg acttacagaa ccgaggggta cggtatatct tgaatgtcac tcgagagata
     1261 gataacttct tcccaggagt ctttgagtat cataacattc gggtatatga tgaagaggca
     1321 acggatctcc tggcgtactg gaatgacact tacaaattca tctctaaagc aaagaaacat
     1381 ggatctaaat gccttgtgca ctgcaaaatg ggggtgagtc gctcagcctc caccgtgatt
     1441 gcctatgcaa tgaaggaata tggctggaat ctggaccgag cctatgacta tgtgaaagaa
     1501 agacgaacgg taaccaagcc caacccaagc ttcatgagac aactggaaga gtatcagggg
     1561 atcttgctgg caagcttcct aggcttgatt catggaggga gggacaagcc ctggggagag
     1621 aaaagcacag aatttgagtc agtagatctg gtttccattc ctggttcacc ctcttgctgc
     1681 aaccctgaga agttacttca catttctcat ccttacctga ccccatctat aaaatgaaaa
     1741 tcaagagatc catctcacag ggttattgtg aataaaaatg tgtttgaatg ttta
//
