LOCUS       XM_047436968            9485 bp    mRNA    linear   PRI 25-AUG-2024
DEFINITION  PREDICTED: Homo sapiens slingshot protein phosphatase 2 (SSH2),
            transcript variant X9, mRNA.
ACCESSION   XM_047436968
VERSION     XM_047436968.1
DBLINK      BioProject: PRJNA168
KEYWORDS    RefSeq; includes ab initio.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000017.11) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001405.40-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/23/2024
            ##Genome-Annotation-Data-END##
            
            ##RefSeq-Attributes-START##
            ab initio :: 6% of CDS bases
            ##RefSeq-Attributes-END##
FEATURES             Location/Qualifiers
     source          1..9485
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /chromosome="17"
     gene            1..9485
                     /gene="SSH2"
                     /gene_synonym="SSH-2; SSH-2L"
                     /note="slingshot protein phosphatase 2; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 5 mRNAs, 9 ESTs, 1070 long SRA reads, 11 Proteins, and
                     97% coverage of the annotated genomic feature by RNAseq
                     alignments, including 4 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:85464"
                     /db_xref="HGNC:HGNC:30580"
                     /db_xref="MIM:606779"
     CDS             398..4582
                     /gene="SSH2"
                     /gene_synonym="SSH-2; SSH-2L"
                     /codon_start=1
                     /product="protein phosphatase Slingshot homolog 2 isoform
                     X11"
                     /protein_id="XP_047292924.1"
                     /db_xref="GeneID:85464"
                     /db_xref="HGNC:HGNC:30580"
                     /db_xref="MIM:606779"
                     /translation="MAGSPGNISESFLTVKGAALFLPRGNGSSTPRISHRRNKHAGDL
                     QQHLQAMFILLRPEDNIRLAVRLESTYQNRTRYMVVVSTNGRQDTEESIVLGMDFSSN
                     DSSTCTMGLVLPLWSDTLIHLDGDGGFSVSTDNRVHIFKPVSVQAMWSALQSLHKACE
                     VARAHNYYPGSLFLTWVSYYESHINSDQSSVNEWNAMQDVQSHRPDSPALFTDIPTER
                     ERTERLIKTKLREIMMQKDLENITSKEIRTELEMQMVCNLREFKEFIDNEMIVILGQM
                     DSPTQIFEHVFLGSEWNASNLEDLQNRGVRYILNVTREIDNFFPGVFEYHNIRVYDEE
                     ATDLLAYWNDTYKFISKAKKHGSKCLVHCKMGVSRSASTVIAYAMKEYGWNLDRAYDY
                     VKERRTVTKPNPSFMRQLEEYQGILLASKQRHNKLWRSHSDSDLSDHHEPICKPGLEL
                     NKKDITTSADQIAEVKTMESHPPIPPVFVEHMVPQDANQKGLCTKERMICLEFTSREF
                     HAGQIEDELNLNDINGCSSGCCLNESKFPLDNCHASKALIQPGHVPEMANKFPDLTVE
                     DLETDALKADMNVHLLPMEELTSPLKDPPMSPDPESPSPQPSCQTEISDFSTDRIDFF
                     SALEKFVELSQETRSRSFSHSRMEELGGGRNESCRLSVVEVAPSKVTADDQRSSSLSN
                     TPHASEESSMDEEQSKAISELVSPDIFMQSHSENAISVKEIVTEIESISQGVGQIQLK
                     GDILPNPCHTPKKNSIHELLLERAQTPENKPGHMEQDEDSCTAQPELAKDSGMCNPEG
                     CLTTHSSIADLEEGEPAEGEQELQGSGMHPGAKWYPGSVRRATLEFEERLRQEQEHHG
                     AAPTCTSLSTRKNSKNDSSVADLAPKGKSDEAPPEHSFVLKEPEMSKGKGKYSGSEAG
                     SLSHSEQNATVPAPRVLEFDHLPDPQEGPGSDTGTQQEGVLKDLRTVIPYQESETQAV
                     PLPLPKRVEIIEYTHIVTSPNHTGPGSEIATSEKSGEQGLRKVNMEKSVTVLCTLDEN
                     LNRTLDPNQVSLHPQVLPLPHSSSPEHNRPTDHPTSILSSPEDRGSSLSTALETAAPF
                     VSHTTHLLSASLDYLHPQTMVHLEGFTEQSSTTDEPSAEQVSWEESQESPLSSGSEVP
                     YKDSQLSSADLSLISKLGDNTGELQEKMDPLPVACRLPHSSSSENIKSLSHSPGVVKE
                     RAKEIESRVVFQAGLTKPSQMRRSASLAKLGYLDLCKDCLPEREPASCESPHLKLLQP
                     FLRTDSGMHAMEDQESLENPGAPHNPEPTKSFVEQLTTTECIVQSKPVERPLVQYAKE
                     FGSSQQYLLPRAGLELTSSEGGLPVLQTQGLQCACPAPGLAVAPRQQHGRTHPLRRLK
                     KANDKKRTTNPFYNTM"
ORIGIN      
        1 attgtgcccc gcagctgcgg aaccgcccgc ccgccgcccg ttcggagcgt cagtcggcga
       61 cagtctggtg gtgggtgcgg agtctgcggc cgttcccgcg gcctcctcct cctccccgtt
      121 cccttcaccc ccaccccgca cccctttccc catcccggct ccgtcaccct cccgtccccc
      181 acactcagga caagaatgcc ctgcccggaa caacccagca gcgcctagat ggctttggtc
      241 acggtccagc ggtcacctac ccccagcacc acctccagcc cctgcgcctc ggaggcagac
      301 agtggggagg aagaatgccg gtcacagccc aggaggagac taaactgctg aacattttac
      361 cctgttgacc tgggtagctc ttgtctctgg ctaaggcatg gcaggcagtc ctggaaacat
      421 cagcgagagc tttctaactg tcaaaggtgc tgcccttttt ctaccacggg gaaatggctc
      481 atccacacca agaatcagcc acagacggaa caagcatgca ggcgatctcc aacagcatct
      541 ccaagcaatg ttcattttac tccgcccaga agacaacatc aggctggctg taagactgga
      601 aagtacttac cagaatcgaa cacgctatat ggtagtggtt tcaactaatg gtagacaaga
      661 cactgaagaa agcatcgtcc taggaatgga tttctcctct aatgacagta gcacttgtac
      721 catgggctta gttttgcctc tctggagcga cacgctaatt catttggatg gtgatggtgg
      781 gttcagtgta tcgacggata acagagttca catattcaaa cctgtatctg tgcaggcaat
      841 gtggtctgca ctacagagct tacacaaggc ttgtgaagtc gccagagcgc ataactacta
      901 cccaggcagc ctatttctca cttgggtgag ttattatgag agccatatca actcagatca
      961 atcctcagtc aatgaatgga atgcaatgca agatgtacag tcccaccggc ccgactctcc
     1021 agctctcttc accgacatac ctactgaacg tgaacgaaca gaaaggctaa ttaaaaccaa
     1081 attaagggag atcatgatgc agaaggattt ggagaatatt acatccaaag agataagaac
     1141 agagttggaa atgcaaatgg tgtgcaactt gcgggaattc aaggaattta tagacaatga
     1201 aatgatagtg atccttggtc aaatggatag ccctacacag atatttgagc atgtgttcct
     1261 gggctcagaa tggaatgcct ccaacttaga ggacttacag aaccgagggg tacggtatat
     1321 cttgaatgtc actcgagaga tagataactt cttcccagga gtctttgagt atcataacat
     1381 tcgggtatat gatgaagagg caacggatct cctggcgtac tggaatgaca cttacaaatt
     1441 catctctaaa gcaaagaaac atggatctaa atgccttgtg cactgcaaaa tgggggtgag
     1501 tcgctcagcc tccaccgtga ttgcctatgc aatgaaggaa tatggctgga atctggaccg
     1561 agcctatgac tatgtgaaag aaagacgaac ggtaaccaag cccaacccaa gcttcatgag
     1621 acaactggaa gagtatcagg ggatcttgct ggcaagcaaa cagcggcata acaaactatg
     1681 gagatctcat tcagatagtg acctctcaga ccaccacgaa cccatctgca aacctgggct
     1741 agaactcaac aagaaggata tcaccacctc agcagaccag attgctgagg tgaagaccat
     1801 ggagagtcac ccacccatac ctcctgtctt tgtggaacat atggtcccac aagatgcaaa
     1861 tcagaaaggc ctgtgtacca aagaaagaat gatctgcttg gagtttactt ctagggaatt
     1921 tcatgctgga cagattgagg atgaattaaa cttaaatgac atcaatggat gctcatcagg
     1981 gtgttgtctg aatgaatcaa aatttcctct tgacaattgc catgcatcca aagccttaat
     2041 tcagcctgga catgtcccag aaatggccaa caagtttcca gacttaacag tggaagattt
     2101 ggagacagat gcactgaaag cagacatgaa tgtccaccta ctgcctatgg aagaattgac
     2161 atctccactg aaagaccccc ccatgtcccc tgatcctgag tcaccaagcc cccaacccag
     2221 ttgccagact gaaatctcag atttcagtac agatcgcatt gactttttta gtgccctaga
     2281 gaagtttgtg gagctctccc aagaaacccg gtcacgatct ttttcccatt caaggatgga
     2341 ggaactgggt ggaggaagga atgagagctg tcgactgtca gtggtagaag tagccccttc
     2401 caaagtgaca gctgatgacc agagaagcag ctctttgagt aatactcccc atgcatcaga
     2461 agaatcttca atggatgagg aacagtcaaa ggcaatttca gaactggtca gcccagacat
     2521 cttcatgcag tctcactcgg aaaatgcaat ttcagtcaaa gaaattgtca ctgaaattga
     2581 gtccatcagt caaggagttg ggcagattca actgaaagga gacatcttac ccaacccatg
     2641 ccatacacca aagaagaaca gcatccatga gctgctcctt gagagggccc agactccaga
     2701 gaacaaacct ggacatatgg agcaagatga ggactcctgc acagcccagc ctgaactagc
     2761 caaagactca gggatgtgca acccagaagg ctgcctaacc acacactcat ctatagcaga
     2821 cttggaagaa ggggaaccag ctgaggggga acaagagctc cagggctcag ggatgcaccc
     2881 aggtgccaag tggtaccctg ggtctgtgag gcgagccacc ttggagttcg aagagcgctt
     2941 acggcaggag caagagcatc atggtgctgc cccaacatgt acctcattgt ccactcgtaa
     3001 gaattcaaag aatgattctt ctgtggcaga cctagcacca aaagggaaaa gtgatgaagc
     3061 ccccccagaa cattcatttg tcctcaagga accagaaatg agcaaaggca aagggaaata
     3121 cagtgggtct gaggctggct cactgtccca ttctgagcag aatgccactg ttccagctcc
     3181 cagggtgctg gagtttgacc acttgccaga tcctcaggag ggcccagggt cagatactgg
     3241 aacacagcag gaaggagtcc tgaaggatct gaggactgtg attccatacc aggagtctga
     3301 aacacaagca gtccctcttc cccttcccaa gagggtagaa atcattgaat atacccacat
     3361 agttacatca cccaatcaca ctgggccagg gagtgaaata gccaccagtg agaagagcgg
     3421 agagcaaggg ctgaggaaag tgaacatgga aaaatctgtc actgtgctct gcacactgga
     3481 tgaaaatcta aacaggactc tggaccccaa ccaggtttct ctgcaccccc aagtgctacc
     3541 tctgcctcat tcttcctccc ctgagcacaa cagacccact gaccatccaa cctccatcct
     3601 gagtagccct gaagacagag gcagcagcct gtccacagcc ctggagacag cagcaccttt
     3661 tgtcagtcat acaacccatt tactgtctgc cagtttggat tacctgcatc cccagactat
     3721 ggttcacctg gagggcttca cagagcagag cagcactaca gatgagccct ctgcagaaca
     3781 ggttagctgg gaagaaagtc aggagagccc tctctccagt ggcagtgagg tgccatataa
     3841 ggactcccag ctaagtagcg cagacctaag tttaattagc aaacttggtg acaacactgg
     3901 ggagttacag gagaaaatgg acccattgcc tgtagcctgt cgactcccac atagctctag
     3961 tagtgaaaac ataaagagtc tcagccacag ccccggtgtg gtgaaggagc gtgctaaaga
     4021 aatcgagtct cgagtggttt tccaggcagg gctcaccaaa ccatcccaaa tgaggcgctc
     4081 agcttctctc gccaaattag gttacttgga cctctgtaaa gactgcttac cagagaggga
     4141 gcctgcctcc tgtgaatccc ctcatctcaa actgcttcag cctttcctca gaacagactc
     4201 aggcatgcac gcgatggagg accaagagtc cctagaaaac ccaggtgccc cccacaaccc
     4261 agagcccacc aagtcttttg tagaacaact cacaacaaca gagtgtattg tgcagagcaa
     4321 gccagtggag aggccccttg tgcagtatgc caaagaattt ggttctagtc agcagtattt
     4381 gctccccagg gcaggacttg aattgactag ttctgaagga ggccttcccg tgctacagac
     4441 ccagggactg cagtgtgcat gcccagctcc agggctggcc gtggcacccc gtcagcaaca
     4501 cggcagaact caccccctta ggagactgaa aaaggcaaat gacaaaaaac ggacaaccaa
     4561 ccccttctat aataccatgt gattctgagc ctacacatgt gactttctag aagaaatgtt
     4621 tgtaaaaggg gcaggtgtaa tatgtaagga acatgcactt tattggttaa ttttataata
     4681 ttttggtcat tttactgttt ctggtgcatg cagggtttgg gtgtttttca gtgtgtatgt
     4741 gtgtgtatat gtaaggggaa agagagattg atctggatgg caagaccgtt tatcattttt
     4801 tatttaaaaa aatcaaacct caaaaaagtc attttcagag aacaccttta tcaaaggcaa
     4861 attgctgttt ttcagtcagc tgccacctgc ttctcatttt gccctctgag aaaaggcatg
     4921 gtttcttaat tgagggaagg aagcagattc ggaggggtgg agataaagct ggggattgga
     4981 gatgttcccc tgcctttgtg atgatggttt ggtttccaga cctgaggcat cgaatgggct
     5041 aaaggtcagc cagaagtcag agggctctca gccttcatcc agccgcagcc ctttagagtt
     5101 cctgaaggag gcaggttccg ctttgcttta aaagagggtc ttccggtgtt ccagagtgta
     5161 tcgttacagt aagacatgat aatggccggc tctgcaaatt tatcatatag tttttttccc
     5221 aagaaaatta tttttgaaat taaaacagga ccccaaatga aatccaagtg gtcttctgta
     5281 gaggaaagca tgataagagg aggaagacat aaagttgggg gtggagaggc tgctgcccag
     5341 aaactgctgg gttggtggga tccacacaga tgggcatctt ggctctccct gccagaaaaa
     5401 tgtgctctgc agtgtcctcc caactgaaaa caacagtgac atgtttgaaa agcagcaatc
     5461 gaaagtcagt gtgttcttgt aaaatgaata tgtatgtagg gttttaaccc ttccattact
     5521 tgaataattc tttgggcctt ctgagtttaa tggccatatt ttcttccagt ttattttcct
     5581 tccccatgct gttgtcccca tgctgcctat ttttttaaat ttcatagatt atatttgaat
     5641 tgttacatat gtttaacatc cattgaatgc aacgttttat ttttggtatt atcactgtta
     5701 acactttttt ttccttttcc tggaaggttt gtcatttctc taaagtttgt acacagtatt
     5761 tatgtacata atattgtcac tgtcttagtg tcttgttcat gttgtagggt aattttgatt
     5821 tattcttttt aagaaggagt agagttgcaa ctggaaaaca cagacaccag aaatgaaagt
     5881 gttgggtgtt gataggaatc tgtacaatat gttgatggtg gctgtagttg tttaaatgga
     5941 gacttccaat caccagctcc tgccaaatta tgcattagta actttttcct cagagacacc
     6001 cctaaaggct cccattaggt cacagcgtga ctgaaagctg atttctctgt gagactgaaa
     6061 tcccagaaca ttgtttgcca gtatctcaac cacagccagg aagtatatgt gagttgccca
     6121 gagtggaagc tcctagtaga ggctgaaggc cacaggggag gcctcagcca ggggcaagtg
     6181 cccacagtga ctccatttag gatgctgtcg ttttgctact gttgtggaga tccttaacgc
     6241 agcagcgcct gtcataaaca agcctcttgt agcttcttac agaaaacaga tttagtctag
     6301 catgaaacac ctctgcatct cattgaaact gaagaggctt gcagatttgc tttcgttgat
     6361 gtccacgtta ctgaggattg actgagtata gactggagac aggtttttgg cttatcacag
     6421 cactgaggaa aatacaaatg cacagactgt cagcatgatg tcagaggcca gagtttggtg
     6481 ggggcagatg gcagggcgac ccaaaagatg cagaaaaggt agactggggc cactgggtct
     6541 taagaggagc tgtgaagttg tgtggaagcc aaggctgggt ctgacatccc tgccaggaag
     6601 caggttggac agaaaccact tgctaaaagc gtctctatgg tgcagtgatt atgtgtaccc
     6661 tgtgctgttg ctcagtagtc tccttgaatg ttcaagtatc tcatccactc agttttgtga
     6721 ttcctggata tttgtgtgtt gtaaagtgtt ttgttaggtg gtatgaacca atgtgaggag
     6781 gcttgagaca gggttatgga tttccagagc tcttccatgt agaataccct gccttcttga
     6841 agcagttcca ccaccaatat gatggggaag ggcaggaact tatggcaggg tggggagagg
     6901 gtttgcctgg aagttaagag agtggcatcc acttgtggta accccttacg atgatgacat
     6961 cccacacact aagaggtaca agcaggacca aagttttgga ctgttccctc ttctcccctc
     7021 cactgtgttt aatgttcact cactgcatta aataacaaca aagatgggac aaaacccact
     7081 aatactgtgg ggaaaaaaaa ttttcaagag cagaggaaag tctttctgcc tttttataat
     7141 tacttttttt atcatttaat ttacctgcct aaataaacat cttctacaga atatctgtca
     7201 ttcaaccatg ccaaggagtt tgtgccagcc ttttcagact cccagaattg ggtgttcctg
     7261 ggttatttac atagctgagc agtgtccagg ggaggtgcgc agtgaactgt caaggacttt
     7321 ccagactgtc ttctcttcag acttttataa tctccagtgg catctttccc ttttcttttg
     7381 ttcatgacct gacctgaagc agcagatttg atagactggc aaagatgaat aggaaaaact
     7441 ttgactcttg cccagtgcct gcctgcctct ctctctctcc tctctctctc tctcttttta
     7501 aaccaccata gactctcact tattttggag gagtgtatgt gcatgtgtac acatatgtac
     7561 atatataaaa acagttgatg ttttggtgta tggggtaaaa gccccaggag catacagaac
     7621 ttgagctgaa cctggtcagt agaaagggaa accccaaccc tttcttgatt tttggagaca
     7681 cccaggacta atggatactg tagtagacat gtagtactat agtaccgtaa tattcatctc
     7741 tcctcatttt agttgccttt cagattctaa atgtttggga tcattcctat catcttagtc
     7801 tcttcaggat ctttagtatt ttcctggttc tgaggaggct tgagacaggg ttatggattt
     7861 ccttgttctg tgtctttatc cctactgata gttcctcttt ctcattttgc aaactaccca
     7921 gagctccaag gacagcctga agatctcagt gcctcaggct ctgaggtact ctgctcacag
     7981 gccccagaca gatgctgttg ggtaaactca aagcttccta tgagaagctt ctgagatgta
     8041 gcaggtcaca gaagtgttca cctgtttcat ctgaggattt cagttctgaa gtgatctagg
     8101 catgtttggt aaaaatgttt ttgtgagagt tcttttttta agaaagcatt atgcaaaaag
     8161 tcacttttaa gggcatttaa aaatttttaa gtaaagccat tctttggctt ttttggacta
     8221 tttgtggata ctttgtttac attttgaata ttaaaatgtg catcatcttg tcggccatgc
     8281 agtcctgcag gcatcagtgc cctggctgtc ctgtgagtcc tcatgcagag cagggccatc
     8341 atggtcagcc cttgtgagta agtgggtata cgctgaagct gacttccgtc tgtgtcctgc
     8401 cctcccatcc agcactctct atggaaatag ttgtcatttc ctcagtgatg gtgtgtctta
     8461 tagtgatggt tgtaatggtg aatggctagt gtcattttgt ttaattttgt tttgcttttt
     8521 gatggtggat aagatgaaat tttagctgtt tcagcatcaa tccaacttaa aagcatcttg
     8581 gactttgttt tcccttccaa actaaaagat caaggcatgt attagacaca agcatatttg
     8641 ctgcctcaac tcctctgaca cccatattag gaaaaggcct gccaccaaag caggaagctg
     8701 cacactccta acccttctcc cagggtgtgg ggtcccttga cgtcatgaag agctattgca
     8761 aggtgcttct gtacttttcc agcctggaaa tggagggtga ctggccctgg ctcctgctat
     8821 gagaagataa ccagcctcat tttctcagtg ccccagaggt ctaggatagg atttctaaac
     8881 tggaatcatc cttaatcacc ttgaagatcc cttaagaggc atttgactgg tgctgccgtc
     8941 tgtgtcctca aagcaatgct ggtggcagcg tcctgtgtac acatgcagag ctaataccca
     9001 aactaaaaac tgggtaactg gccctgaagt gcttcccaat cagtaagccc acagggaaat
     9061 gtttgatttt tatgttctgt tggattttgg tttgcttggc atatctaaag gtgcctttac
     9121 ttttcttttt tttttttttt ctttctgctt tgttttgtag gacttgttct aacatggaaa
     9181 acaagtccag aagactctcc tctgactgtt acctttgccc caagccaccc caaactttta
     9241 tgctcatgtt ttattaaagc aggtgctccc tggaatctct gggacatttt tgaggcattt
     9301 gaagcagaat atagagtggt ctcatctcct tccttaatct tcctggtggt tgggatgttc
     9361 cacttgtatc atagattttt ttattacaga tatgctccac tgtttttaaa tgtgaacttg
     9421 tgcgcaaatg tgcagattca atgttcttgt tacagattga ataaattttt attttgaaga
     9481 tgaaa
//
