LOCUS       XM_005258058            9366 bp    mRNA    linear   PRI 25-AUG-2024
DEFINITION  PREDICTED: Homo sapiens slingshot protein phosphatase 2 (SSH2),
            transcript variant X1, mRNA.
ACCESSION   XM_005258058
VERSION     XM_005258058.4
DBLINK      BioProject: PRJNA168
KEYWORDS    RefSeq.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000017.11) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            On Apr 5, 2022 this sequence version replaced XM_005258058.3.
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001405.40-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/23/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9366
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /chromosome="17"
     gene            1..9366
                     /gene="SSH2"
                     /gene_synonym="SSH-2; SSH-2L"
                     /note="slingshot protein phosphatase 2; Derived by
                     automated computational analysis using gene prediction
                     method: Gnomon. Supporting evidence includes similarity
                     to: 5 mRNAs, 9 ESTs, 1070 long SRA reads, 11 Proteins, and
                     100% coverage of the annotated genomic feature by RNAseq
                     alignments, including 37 samples with support for all
                     annotated introns"
                     /db_xref="GeneID:85464"
                     /db_xref="HGNC:HGNC:30580"
                     /db_xref="MIM:606779"
     CDS             111..4463
                     /gene="SSH2"
                     /gene_synonym="SSH-2; SSH-2L"
                     /codon_start=1
                     /product="protein phosphatase Slingshot homolog 2 isoform
                     X1"
                     /protein_id="XP_005258115.1"
                     /db_xref="GeneID:85464"
                     /db_xref="HGNC:HGNC:30580"
                     /db_xref="MIM:606779"
                     /translation="MALVTVQRSPTPSTTSSPCASSSHLEDSESAALLCCECEESEIF
                     TDSNEADSGEEECRSQPRSISESFLTVKGAALFLPRGNGSSTPRISHRRNKHAGDLQQ
                     HLQAMFILLRPEDNIRLAVRLESTYQNRTRYMVVVSTNGRQDTEESIVLGMDFSSNDS
                     STCTMGLVLPLWSDTLIHLDGDGGFSVSTDNRVHIFKPVSVQAMWSALQSLHKACEVA
                     RAHNYYPGSLFLTWVSYYESHINSDQSSVNEWNAMQDVQSHRPDSPALFTDIPTERER
                     TERLIKTKLREIMMQKDLENITSKEIRTELEMQMVCNLREFKEFIDNEMIVILGQMDS
                     PTQIFEHVFLGSEWNASNLEDLQNRGVRYILNVTREIDNFFPGVFEYHNIRVYDEEAT
                     DLLAYWNDTYKFISKAKKHGSKCLVHCKMGVSRSASTVIAYAMKEYGWNLDRAYDYVK
                     ERRTVTKPNPSFMRQLEEYQGILLASKQRHNKLWRSHSDSDLSDHHEPICKPGLELNK
                     KDITTSADQIAEVKTMESHPPIPPVFVEHMVPQDANQKGLCTKERMICLEFTSREFHA
                     GQIEDELNLNDINGCSSGCCLNESKFPLDNCHASKALIQPGHVPEMANKFPDLTVEDL
                     ETDALKADMNVHLLPMEELTSPLKDPPMSPDPESPSPQPSCQTEISDFSTDRIDFFSA
                     LEKFVELSQETRSRSFSHSRMEELGGGRNESCRLSVVEVAPSKVTADDQRSSSLSNTP
                     HASEESSMDEEQSKAISELVSPDIFMQSHSENAISVKEIVTEIESISQGVGQIQLKGD
                     ILPNPCHTPKKNSIHELLLERAQTPENKPGHMEQDEDSCTAQPELAKDSGMCNPEGCL
                     TTHSSIADLEEGEPAEGEQELQGSGMHPGAKWYPGSVRRATLEFEERLRQEQEHHGAA
                     PTCTSLSTRKNSKNDSSVADLAPKGKSDEAPPEHSFVLKEPEMSKGKGKYSGSEAGSL
                     SHSEQNATVPAPRVLEFDHLPDPQEGPGSDTGTQQEGVLKDLRTVIPYQESETQAVPL
                     PLPKRVEIIEYTHIVTSPNHTGPGSEIATSEKSGEQGLRKVNMEKSVTVLCTLDENLN
                     RTLDPNQVSLHPQVLPLPHSSSPEHNRPTDHPTSILSSPEDRGSSLSTALETAAPFVS
                     HTTHLLSASLDYLHPQTMVHLEGFTEQSSTTDEPSAEQVSWEESQESPLSSGSEVPYK
                     DSQLSSADLSLISKLGDNTGELQEKMDPLPVACRLPHSSSSENIKSLSHSPGVVKERA
                     KEIESRVVFQAGLTKPSQMRRSASLAKLGYLDLCKDCLPEREPASCESPHLKLLQPFL
                     RTDSGMHAMEDQESLENPGAPHNPEPTKSFVEQLTTTECIVQSKPVERPLVQYAKEFG
                     SSQQYLLPRAGLELTSSEGGLPVLQTQGLQCACPAPGLAVAPRQQHGRTHPLRRLKKA
                     NDKKRTTNPFYNTM"
ORIGIN      
        1 attgtgcccc gcagctgcgg aaccgcccgc ccgccgcccg ttcggagcgt cagtcggcga
       61 cagtctggtg gacaagaatg ccctgcccgg aacaacccag cagcgcctag atggctttgg
      121 tcacggtcca gcggtcacct acccccagca ccacctccag cccctgcgcc tcgagctctc
      181 atttggaaga cagtgaatca gcagcattac tttgctgtga atgtgaagaa tcagaaatct
      241 ttactgattc caatgaggca gacagtgggg aggaagaatg ccggtcacag cccaggagca
      301 tcagcgagag ctttctaact gtcaaaggtg ctgccctttt tctaccacgg ggaaatggct
      361 catccacacc aagaatcagc cacagacgga acaagcatgc aggcgatctc caacagcatc
      421 tccaagcaat gttcatttta ctccgcccag aagacaacat caggctggct gtaagactgg
      481 aaagtactta ccagaatcga acacgctata tggtagtggt ttcaactaat ggtagacaag
      541 acactgaaga aagcatcgtc ctaggaatgg atttctcctc taatgacagt agcacttgta
      601 ccatgggctt agttttgcct ctctggagcg acacgctaat tcatttggat ggtgatggtg
      661 ggttcagtgt atcgacggat aacagagttc acatattcaa acctgtatct gtgcaggcaa
      721 tgtggtctgc actacagagc ttacacaagg cttgtgaagt cgccagagcg cataactact
      781 acccaggcag cctatttctc acttgggtga gttattatga gagccatatc aactcagatc
      841 aatcctcagt caatgaatgg aatgcaatgc aagatgtaca gtcccaccgg cccgactctc
      901 cagctctctt caccgacata cctactgaac gtgaacgaac agaaaggcta attaaaacca
      961 aattaaggga gatcatgatg cagaaggatt tggagaatat tacatccaaa gagataagaa
     1021 cagagttgga aatgcaaatg gtgtgcaact tgcgggaatt caaggaattt atagacaatg
     1081 aaatgatagt gatccttggt caaatggata gccctacaca gatatttgag catgtgttcc
     1141 tgggctcaga atggaatgcc tccaacttag aggacttaca gaaccgaggg gtacggtata
     1201 tcttgaatgt cactcgagag atagataact tcttcccagg agtctttgag tatcataaca
     1261 ttcgggtata tgatgaagag gcaacggatc tcctggcgta ctggaatgac acttacaaat
     1321 tcatctctaa agcaaagaaa catggatcta aatgccttgt gcactgcaaa atgggggtga
     1381 gtcgctcagc ctccaccgtg attgcctatg caatgaagga atatggctgg aatctggacc
     1441 gagcctatga ctatgtgaaa gaaagacgaa cggtaaccaa gcccaaccca agcttcatga
     1501 gacaactgga agagtatcag gggatcttgc tggcaagcaa acagcggcat aacaaactat
     1561 ggagatctca ttcagatagt gacctctcag accaccacga acccatctgc aaacctgggc
     1621 tagaactcaa caagaaggat atcaccacct cagcagacca gattgctgag gtgaagacca
     1681 tggagagtca cccacccata cctcctgtct ttgtggaaca tatggtccca caagatgcaa
     1741 atcagaaagg cctgtgtacc aaagaaagaa tgatctgctt ggagtttact tctagggaat
     1801 ttcatgctgg acagattgag gatgaattaa acttaaatga catcaatgga tgctcatcag
     1861 ggtgttgtct gaatgaatca aaatttcctc ttgacaattg ccatgcatcc aaagccttaa
     1921 ttcagcctgg acatgtccca gaaatggcca acaagtttcc agacttaaca gtggaagatt
     1981 tggagacaga tgcactgaaa gcagacatga atgtccacct actgcctatg gaagaattga
     2041 catctccact gaaagacccc cccatgtccc ctgatcctga gtcaccaagc ccccaaccca
     2101 gttgccagac tgaaatctca gatttcagta cagatcgcat tgactttttt agtgccctag
     2161 agaagtttgt ggagctctcc caagaaaccc ggtcacgatc tttttcccat tcaaggatgg
     2221 aggaactggg tggaggaagg aatgagagct gtcgactgtc agtggtagaa gtagcccctt
     2281 ccaaagtgac agctgatgac cagagaagca gctctttgag taatactccc catgcatcag
     2341 aagaatcttc aatggatgag gaacagtcaa aggcaatttc agaactggtc agcccagaca
     2401 tcttcatgca gtctcactcg gaaaatgcaa tttcagtcaa agaaattgtc actgaaattg
     2461 agtccatcag tcaaggagtt gggcagattc aactgaaagg agacatctta cccaacccat
     2521 gccatacacc aaagaagaac agcatccatg agctgctcct tgagagggcc cagactccag
     2581 agaacaaacc tggacatatg gagcaagatg aggactcctg cacagcccag cctgaactag
     2641 ccaaagactc agggatgtgc aacccagaag gctgcctaac cacacactca tctatagcag
     2701 acttggaaga aggggaacca gctgaggggg aacaagagct ccagggctca gggatgcacc
     2761 caggtgccaa gtggtaccct gggtctgtga ggcgagccac cttggagttc gaagagcgct
     2821 tacggcagga gcaagagcat catggtgctg ccccaacatg tacctcattg tccactcgta
     2881 agaattcaaa gaatgattct tctgtggcag acctagcacc aaaagggaaa agtgatgaag
     2941 cccccccaga acattcattt gtcctcaagg aaccagaaat gagcaaaggc aaagggaaat
     3001 acagtgggtc tgaggctggc tcactgtccc attctgagca gaatgccact gttccagctc
     3061 ccagggtgct ggagtttgac cacttgccag atcctcagga gggcccaggg tcagatactg
     3121 gaacacagca ggaaggagtc ctgaaggatc tgaggactgt gattccatac caggagtctg
     3181 aaacacaagc agtccctctt ccccttccca agagggtaga aatcattgaa tatacccaca
     3241 tagttacatc acccaatcac actgggccag ggagtgaaat agccaccagt gagaagagcg
     3301 gagagcaagg gctgaggaaa gtgaacatgg aaaaatctgt cactgtgctc tgcacactgg
     3361 atgaaaatct aaacaggact ctggacccca accaggtttc tctgcacccc caagtgctac
     3421 ctctgcctca ttcttcctcc cctgagcaca acagacccac tgaccatcca acctccatcc
     3481 tgagtagccc tgaagacaga ggcagcagcc tgtccacagc cctggagaca gcagcacctt
     3541 ttgtcagtca tacaacccat ttactgtctg ccagtttgga ttacctgcat ccccagacta
     3601 tggttcacct ggagggcttc acagagcaga gcagcactac agatgagccc tctgcagaac
     3661 aggttagctg ggaagaaagt caggagagcc ctctctccag tggcagtgag gtgccatata
     3721 aggactccca gctaagtagc gcagacctaa gtttaattag caaacttggt gacaacactg
     3781 gggagttaca ggagaaaatg gacccattgc ctgtagcctg tcgactccca catagctcta
     3841 gtagtgaaaa cataaagagt ctcagccaca gccccggtgt ggtgaaggag cgtgctaaag
     3901 aaatcgagtc tcgagtggtt ttccaggcag ggctcaccaa accatcccaa atgaggcgct
     3961 cagcttctct cgccaaatta ggttacttgg acctctgtaa agactgctta ccagagaggg
     4021 agcctgcctc ctgtgaatcc cctcatctca aactgcttca gcctttcctc agaacagact
     4081 caggcatgca cgcgatggag gaccaagagt ccctagaaaa cccaggtgcc ccccacaacc
     4141 cagagcccac caagtctttt gtagaacaac tcacaacaac agagtgtatt gtgcagagca
     4201 agccagtgga gaggcccctt gtgcagtatg ccaaagaatt tggttctagt cagcagtatt
     4261 tgctccccag ggcaggactt gaattgacta gttctgaagg aggccttccc gtgctacaga
     4321 cccagggact gcagtgtgca tgcccagctc cagggctggc cgtggcaccc cgtcagcaac
     4381 acggcagaac tcaccccctt aggagactga aaaaggcaaa tgacaaaaaa cggacaacca
     4441 accccttcta taataccatg tgattctgag cctacacatg tgactttcta gaagaaatgt
     4501 ttgtaaaagg ggcaggtgta atatgtaagg aacatgcact ttattggtta attttataat
     4561 attttggtca ttttactgtt tctggtgcat gcagggtttg ggtgtttttc agtgtgtatg
     4621 tgtgtgtata tgtaagggga aagagagatt gatctggatg gcaagaccgt ttatcatttt
     4681 ttatttaaaa aaatcaaacc tcaaaaaagt cattttcaga gaacaccttt atcaaaggca
     4741 aattgctgtt tttcagtcag ctgccacctg cttctcattt tgccctctga gaaaaggcat
     4801 ggtttcttaa ttgagggaag gaagcagatt cggaggggtg gagataaagc tggggattgg
     4861 agatgttccc ctgcctttgt gatgatggtt tggtttccag acctgaggca tcgaatgggc
     4921 taaaggtcag ccagaagtca gagggctctc agccttcatc cagccgcagc cctttagagt
     4981 tcctgaagga ggcaggttcc gctttgcttt aaaagagggt cttccggtgt tccagagtgt
     5041 atcgttacag taagacatga taatggccgg ctctgcaaat ttatcatata gtttttttcc
     5101 caagaaaatt atttttgaaa ttaaaacagg accccaaatg aaatccaagt ggtcttctgt
     5161 agaggaaagc atgataagag gaggaagaca taaagttggg ggtggagagg ctgctgccca
     5221 gaaactgctg ggttggtggg atccacacag atgggcatct tggctctccc tgccagaaaa
     5281 atgtgctctg cagtgtcctc ccaactgaaa acaacagtga catgtttgaa aagcagcaat
     5341 cgaaagtcag tgtgttcttg taaaatgaat atgtatgtag ggttttaacc cttccattac
     5401 ttgaataatt ctttgggcct tctgagttta atggccatat tttcttccag tttattttcc
     5461 ttccccatgc tgttgtcccc atgctgccta tttttttaaa tttcatagat tatatttgaa
     5521 ttgttacata tgtttaacat ccattgaatg caacgtttta tttttggtat tatcactgtt
     5581 aacacttttt tttccttttc ctggaaggtt tgtcatttct ctaaagtttg tacacagtat
     5641 ttatgtacat aatattgtca ctgtcttagt gtcttgttca tgttgtaggg taattttgat
     5701 ttattctttt taagaaggag tagagttgca actggaaaac acagacacca gaaatgaaag
     5761 tgttgggtgt tgataggaat ctgtacaata tgttgatggt ggctgtagtt gtttaaatgg
     5821 agacttccaa tcaccagctc ctgccaaatt atgcattagt aactttttcc tcagagacac
     5881 ccctaaaggc tcccattagg tcacagcgtg actgaaagct gatttctctg tgagactgaa
     5941 atcccagaac attgtttgcc agtatctcaa ccacagccag gaagtatatg tgagttgccc
     6001 agagtggaag ctcctagtag aggctgaagg ccacagggga ggcctcagcc aggggcaagt
     6061 gcccacagtg actccattta ggatgctgtc gttttgctac tgttgtggag atccttaacg
     6121 cagcagcgcc tgtcataaac aagcctcttg tagcttctta cagaaaacag atttagtcta
     6181 gcatgaaaca cctctgcatc tcattgaaac tgaagaggct tgcagatttg ctttcgttga
     6241 tgtccacgtt actgaggatt gactgagtat agactggaga caggtttttg gcttatcaca
     6301 gcactgagga aaatacaaat gcacagactg tcagcatgat gtcagaggcc agagtttggt
     6361 gggggcagat ggcagggcga cccaaaagat gcagaaaagg tagactgggg ccactgggtc
     6421 ttaagaggag ctgtgaagtt gtgtggaagc caaggctggg tctgacatcc ctgccaggaa
     6481 gcaggttgga cagaaaccac ttgctaaaag cgtctctatg gtgcagtgat tatgtgtacc
     6541 ctgtgctgtt gctcagtagt ctccttgaat gttcaagtat ctcatccact cagttttgtg
     6601 attcctggat atttgtgtgt tgtaaagtgt tttgttaggt ggtatgaacc aatgtgagga
     6661 ggcttgagac agggttatgg atttccagag ctcttccatg tagaataccc tgccttcttg
     6721 aagcagttcc accaccaata tgatggggaa gggcaggaac ttatggcagg gtggggagag
     6781 ggtttgcctg gaagttaaga gagtggcatc cacttgtggt aaccccttac gatgatgaca
     6841 tcccacacac taagaggtac aagcaggacc aaagttttgg actgttccct cttctcccct
     6901 ccactgtgtt taatgttcac tcactgcatt aaataacaac aaagatggga caaaacccac
     6961 taatactgtg gggaaaaaaa attttcaaga gcagaggaaa gtctttctgc ctttttataa
     7021 ttactttttt tatcatttaa tttacctgcc taaataaaca tcttctacag aatatctgtc
     7081 attcaaccat gccaaggagt ttgtgccagc cttttcagac tcccagaatt gggtgttcct
     7141 gggttattta catagctgag cagtgtccag gggaggtgcg cagtgaactg tcaaggactt
     7201 tccagactgt cttctcttca gacttttata atctccagtg gcatctttcc cttttctttt
     7261 gttcatgacc tgacctgaag cagcagattt gatagactgg caaagatgaa taggaaaaac
     7321 tttgactctt gcccagtgcc tgcctgcctc tctctctctc ctctctctct ctctcttttt
     7381 aaaccaccat agactctcac ttattttgga ggagtgtatg tgcatgtgta cacatatgta
     7441 catatataaa aacagttgat gttttggtgt atggggtaaa agccccagga gcatacagaa
     7501 cttgagctga acctggtcag tagaaaggga aaccccaacc ctttcttgat ttttggagac
     7561 acccaggact aatggatact gtagtagaca tgtagtacta tagtaccgta atattcatct
     7621 ctcctcattt tagttgcctt tcagattcta aatgtttggg atcattccta tcatcttagt
     7681 ctcttcagga tctttagtat tttcctggtt ctgaggaggc ttgagacagg gttatggatt
     7741 tccttgttct gtgtctttat ccctactgat agttcctctt tctcattttg caaactaccc
     7801 agagctccaa ggacagcctg aagatctcag tgcctcaggc tctgaggtac tctgctcaca
     7861 ggccccagac agatgctgtt gggtaaactc aaagcttcct atgagaagct tctgagatgt
     7921 agcaggtcac agaagtgttc acctgtttca tctgaggatt tcagttctga agtgatctag
     7981 gcatgtttgg taaaaatgtt tttgtgagag ttcttttttt aagaaagcat tatgcaaaaa
     8041 gtcactttta agggcattta aaaattttta agtaaagcca ttctttggct tttttggact
     8101 atttgtggat actttgttta cattttgaat attaaaatgt gcatcatctt gtcggccatg
     8161 cagtcctgca ggcatcagtg ccctggctgt cctgtgagtc ctcatgcaga gcagggccat
     8221 catggtcagc ccttgtgagt aagtgggtat acgctgaagc tgacttccgt ctgtgtcctg
     8281 ccctcccatc cagcactctc tatggaaata gttgtcattt cctcagtgat ggtgtgtctt
     8341 atagtgatgg ttgtaatggt gaatggctag tgtcattttg tttaattttg ttttgctttt
     8401 tgatggtgga taagatgaaa ttttagctgt ttcagcatca atccaactta aaagcatctt
     8461 ggactttgtt ttcccttcca aactaaaaga tcaaggcatg tattagacac aagcatattt
     8521 gctgcctcaa ctcctctgac acccatatta ggaaaaggcc tgccaccaaa gcaggaagct
     8581 gcacactcct aacccttctc ccagggtgtg gggtcccttg acgtcatgaa gagctattgc
     8641 aaggtgcttc tgtacttttc cagcctggaa atggagggtg actggccctg gctcctgcta
     8701 tgagaagata accagcctca ttttctcagt gccccagagg tctaggatag gatttctaaa
     8761 ctggaatcat ccttaatcac cttgaagatc ccttaagagg catttgactg gtgctgccgt
     8821 ctgtgtcctc aaagcaatgc tggtggcagc gtcctgtgta cacatgcaga gctaataccc
     8881 aaactaaaaa ctgggtaact ggccctgaag tgcttcccaa tcagtaagcc cacagggaaa
     8941 tgtttgattt ttatgttctg ttggattttg gtttgcttgg catatctaaa ggtgccttta
     9001 cttttctttt tttttttttt tctttctgct ttgttttgta ggacttgttc taacatggaa
     9061 aacaagtcca gaagactctc ctctgactgt tacctttgcc ccaagccacc ccaaactttt
     9121 atgctcatgt tttattaaag caggtgctcc ctggaatctc tgggacattt ttgaggcatt
     9181 tgaagcagaa tatagagtgg tctcatctcc ttccttaatc ttcctggtgg ttgggatgtt
     9241 ccacttgtat catagatttt tttattacag atatgctcca ctgtttttaa atgtgaactt
     9301 gtgcgcaaat gtgcagattc aatgttcttg ttacagattg aataaatttt tattttgaag
     9361 atgaaa
//
