LOCUS       NM_001351123             577 bp    mRNA    linear   PRI 04-APR-2024
DEFINITION  Homo sapiens sperm microtubule inner protein 11 (SPMIP11),
            transcript variant 1, mRNA.
ACCESSION   NM_001351123 NR_029449
VERSION     NM_001351123.2
KEYWORDS    RefSeq; MANE Select.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 577)
  AUTHORS   Leung,M.R., Zeng,J., Wang,X., Roelofs,M.C., Huang,W., Zenezini
            Chiozzi,R., Hevler,J.F., Heck,A.J.R., Dutcher,S.K., Brown,A.,
            Zhang,R. and Zeev-Ben-Mordehai,T.
  TITLE     Structural specializations of the sperm tail
  JOURNAL   Cell 186 (13), 2880-2896 (2023)
   PUBMED   37327785
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC079951.35 and BC036043.1.
            
            On May 17, 2019 this sequence version replaced NM_001351123.1.
            
            ##Evidence-Data-START##
            Transcript exon combination :: AK131005.1, BC036043.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA1968968, SAMEA2148093
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            MANE Ensembl match     :: ENST00000548380.6/ ENSP00000489652.1
            RefSeq Select criteria :: based on conservation, expression,
                                      longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-28                AC079951.35        188203-188230
            29-577              BC036043.1         4-552
FEATURES             Location/Qualifiers
     source          1..577
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /chromosome="12"
                     /map="12q13.12"
     gene            1..577
                     /gene="SPMIP11"
                     /gene_synonym="LINC00935; TEX49"
                     /note="sperm microtubule inner protein 11"
                     /db_xref="GeneID:255411"
                     /db_xref="HGNC:HGNC:48628"
     exon            1..125
                     /gene="SPMIP11"
                     /gene_synonym="LINC00935; TEX49"
                     /inference="alignment:Splign:2.1.0"
     CDS             47..442
                     /gene="SPMIP11"
                     /gene_synonym="LINC00935; TEX49"
                     /note="isoform 1 is encoded by transcript variant 1; long
                     intergenic non-protein coding RNA 935; testis-expressed
                     protein 49; testis expressed 49"
                     /codon_start=1
                     /product="sperm microtubule inner protein 11 isoform 1"
                     /protein_id="NP_001338052.1"
                     /db_xref="CCDS:CCDS86296.1"
                     /db_xref="GeneID:255411"
                     /db_xref="HGNC:HGNC:48628"
                     /translation="MAFFNLYLLGYQNSFQNKKRNTTEETNQKEPEPTRLPPIISKDG
                     NYSVHQNSHTRYHEAVRKVLLKTFPNQVFRIPLTDAQNFSFWWSHDPGVRPEETMPWI
                     RSPRHCLIKSAMTRFMDHSILNDRTFSLY"
     exon            126..248
                     /gene="SPMIP11"
                     /gene_synonym="LINC00935; TEX49"
                     /inference="alignment:Splign:2.1.0"
     exon            249..393
                     /gene="SPMIP11"
                     /gene_synonym="LINC00935; TEX49"
                     /inference="alignment:Splign:2.1.0"
     exon            394..577
                     /gene="SPMIP11"
                     /gene_synonym="LINC00935; TEX49"
                     /inference="alignment:Splign:2.1.0"
     regulatory      557..562
                     /regulatory_class="polyA_signal_sequence"
                     /gene="SPMIP11"
                     /gene_synonym="LINC00935; TEX49"
                     /note="hexamer: AGTAAA"
     polyA_site      577
                     /gene="SPMIP11"
                     /gene_synonym="LINC00935; TEX49"
                     /note="major polyA site"
ORIGIN      
        1 agtgccccaa cctggacgtt ccagaagagg ccagggagga tctgagatgg ccttcttcaa
       61 cttgtatcta ttgggatatc aaaattcctt tcagaacaag aaaaggaaca caactgaaga
      121 aacaaaccag aaggaaccag agcctactag gcttcccccc attatctcaa aagatgggaa
      181 ttattccgtg caccagaata gccacacaag ataccacgaa gctgtccgga aggtgttgtt
      241 gaagacgttt cccaatcagg tcttcagaat ccccttgact gatgctcaga acttcagctt
      301 ctggtggtcc catgatccag gagtgcgtcc agaggaaacc atgccatgga tccggagccc
      361 acgccattgt ctcataaaaa gcgcgatgac caggtttatg gatcactcta ttctcaatga
      421 caggaccttc agtctgtatt aagaagatat ggctgcagaa agacaagatg aattgtggca
      481 agagtgcaga gggggaaaga aggaggtttc ccagttccga tggctgacta atgggaggag
      541 gagatggaga aagcacagta aacagactgg actaaaa
//
