LOCUS       NM_001080465             617 bp    mRNA    linear   PRI 07-APR-2024
DEFINITION  Homo sapiens sperm microtubule associated protein 1 (SPMAP1), mRNA.
ACCESSION   NM_001080465 XM_371053
VERSION     NM_001080465.3
KEYWORDS    RefSeq; MANE Select.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 617)
  AUTHORS   Leung,M.R., Zeng,J., Wang,X., Roelofs,M.C., Huang,W., Zenezini
            Chiozzi,R., Hevler,J.F., Heck,A.J.R., Dutcher,S.K., Brown,A.,
            Zhang,R. and Zeev-Ben-Mordehai,T.
  TITLE     Structural specializations of the sperm tail
  JOURNAL   Cell 186 (13), 2880-2896 (2023)
   PUBMED   37327785
REFERENCE   2  (bases 1 to 617)
  AUTHORS   Zody,M.C., Garber,M., Adams,D.J., Sharpe,T., Harrow,J.,
            Lupski,J.R., Nicholson,C., Searle,S.M., Wilming,L., Young,S.K.,
            Abouelleil,A., Allen,N.R., Bi,W., Bloom,T., Borowsky,M.L.,
            Bugalter,B.E., Butler,J., Chang,J.L., Chen,C.K., Cook,A., Corum,B.,
            Cuomo,C.A., de Jong,P.J., DeCaprio,D., Dewar,K., FitzGerald,M.,
            Gilbert,J., Gibson,R., Gnerre,S., Goldstein,S., Grafham,D.V.,
            Grocock,R., Hafez,N., Hagopian,D.S., Hart,E., Norman,C.H.,
            Humphray,S., Jaffe,D.B., Jones,M., Kamal,M., Khodiyar,V.K.,
            LaButti,K., Laird,G., Lehoczky,J., Liu,X., Lokyitsang,T.,
            Loveland,J., Lui,A., Macdonald,P., Major,J.E., Matthews,L.,
            Mauceli,E., McCarroll,S.A., Mihalev,A.H., Mudge,J., Nguyen,C.,
            Nicol,R., O'Leary,S.B., Osoegawa,K., Schwartz,D.C., Shaw-Smith,C.,
            Stankiewicz,P., Steward,C., Swarbreck,D., Venkataraman,V.,
            Whittaker,C.A., Yang,X., Zimmer,A.R., Bradley,A., Hubbard,T.,
            Birren,B.W., Rogers,J., Lander,E.S. and Nusbaum,C.
  TITLE     DNA sequence of human chromosome 17 and analysis of rearrangement
            in the human lineage
  JOURNAL   Nature 440 (7087), 1045-1049 (2006)
   PUBMED   16625196
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC006449.19, DY654789.1 and AW182930.1.
            
            On Jan 3, 2020 this sequence version replaced NM_001080465.2.
            
            Sequence Note: This RefSeq record was created from transcript and
            genomic sequence data because no single transcript was available
            for the full length of the gene. The extent of this transcript is
            supported by orthologous data and transcript alignments.
            
            ##Evidence-Data-START##
            Transcript exon combination :: HY022422.1, DY654790.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA1968968, SAMEA2148093
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            MANE Ensembl match     :: ENST00000614158.2/ ENSP00000479396.1
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-98                AC006449.19        286344-286441       c
            99-492              DY654789.1         1-394
            493-615             AW182930.1         5-127               c
            616-617             AC006449.19        280089-280090       c
FEATURES             Location/Qualifiers
     source          1..617
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /chromosome="17"
                     /map="17q12"
     gene            1..617
                     /gene="SPMAP1"
                     /gene_synonym="C17orf98"
                     /note="sperm microtubule associated protein 1"
                     /db_xref="GeneID:388381"
                     /db_xref="HGNC:HGNC:34492"
     exon            1..256
                     /gene="SPMAP1"
                     /gene_synonym="C17orf98"
                     /inference="alignment:Splign:2.1.0"
     CDS             50..514
                     /gene="SPMAP1"
                     /gene_synonym="C17orf98"
                     /note="uncharacterized protein C17orf98"
                     /codon_start=1
                     /product="sperm microtubule associated protein 1"
                     /protein_id="NP_001073934.1"
                     /db_xref="CCDS:CCDS42310.1"
                     /db_xref="GeneID:388381"
                     /db_xref="HGNC:HGNC:34492"
                     /translation="MAYLSECRLRLEKGFILDGVAVSTAARAYGRSRPKLWSAIPPYN
                     AQQDYHARSYFQSHVVPPLLRKTDQDHGGTGRDGWIVDYIHIFGQGQRYLNRRNWAGT
                     GHSLQQVTGHDHYNADLKPIDGFNGRFGYRRNTPALRQSTSVFGEVTHFPLF"
     exon            257..356
                     /gene="SPMAP1"
                     /gene_synonym="C17orf98"
                     /inference="alignment:Splign:2.1.0"
     exon            357..617
                     /gene="SPMAP1"
                     /gene_synonym="C17orf98"
                     /inference="alignment:Splign:2.1.0"
     polyA_site      617
                     /gene="SPMAP1"
                     /gene_synonym="C17orf98"
                     /note="major polyA site"
ORIGIN      
        1 gggtcctcat cccccaccag aaaggccctc cgaggctacg gtggttggga tggcgtacct
       61 gagcgagtgt cgcctgcgac tggagaaagg ctttatcttg gacggggtgg ctgtgagcac
      121 cgctgcccgc gcttatgggc gctctaggcc caagctgtgg tcggcgattc cgccctacaa
      181 cgcgcagcag gactaccacg cccgcagcta cttccagagt cacgtggttc cgcccctttt
      241 gcggaaaact gatcaggatc atggcggtac aggaagggat ggctggatag tagactacat
      301 ccacatcttc gggcaaggac aaagatacct caacaggaga aattgggcag ggacagggca
      361 ttctctccag caggtgactg ggcatgacca ctacaatgct gatctgaaac cgatcgatgg
      421 gttcaatgga aggtttggct accgcaggaa cactccagcc ctccgtcaga gcacgtccgt
      481 cttcggagag gtcacccact tccctctgtt ctaacagcat cttttccctt catagccatc
      541 gacctgaatt tctaagacaa atgtttagat gaactcttag tgttatttta cgttaaaaaa
      601 attaatttgt gtctcca
//
