LOCUS       XM_047417770            4485 bp    mRNA    linear   PRI 25-AUG-2024
DEFINITION  PREDICTED: Homo sapiens sperm flagellar 2 (SPEF2), transcript
            variant X18, mRNA.
ACCESSION   XM_047417770
VERSION     XM_047417770.1
DBLINK      BioProject: PRJNA168
KEYWORDS    RefSeq.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
COMMENT     MODEL REFSEQ:  This record is predicted by automated computational
            analysis. This record is derived from a genomic sequence
            (NC_000005.10) annotated using gene prediction method: Gnomon,
            supported by mRNA and EST evidence.
            Also see:
                Documentation of NCBI's Annotation Process
            
            ##Genome-Annotation-Data-START##
            Annotation Provider         :: NCBI RefSeq
            Annotation Status           :: Updated annotation
            Annotation Name             :: GCF_000001405.40-RS_2024_08
            Annotation Pipeline         :: NCBI eukaryotic genome annotation
                                           pipeline
            Annotation Software Version :: 10.3
            Annotation Method           :: Best-placed RefSeq; Gnomon;
                                           RefSeqFE; cmsearch; tRNAscan-SE
            Features Annotated          :: Gene; mRNA; CDS; ncRNA
            Annotation Date             :: 08/23/2024
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4485
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /chromosome="5"
     gene            1..4485
                     /gene="SPEF2"
                     /gene_synonym="CT122; KPL2; SPGF43"
                     /note="sperm flagellar 2; Derived by automated
                     computational analysis using gene prediction method:
                     Gnomon. Supporting evidence includes similarity to: 1
                     mRNA, 13 ESTs, 49 long SRA reads, and 95% coverage of the
                     annotated genomic feature by RNAseq alignments, including
                     26 samples with support for all annotated introns"
                     /db_xref="GeneID:79925"
                     /db_xref="HGNC:HGNC:26293"
                     /db_xref="MIM:610172"
     CDS             136..3039
                     /gene="SPEF2"
                     /gene_synonym="CT122; KPL2; SPGF43"
                     /codon_start=1
                     /product="sperm flagellar protein 2 isoform X16"
                     /protein_id="XP_047273726.1"
                     /db_xref="GeneID:79925"
                     /db_xref="HGNC:HGNC:26293"
                     /db_xref="MIM:610172"
                     /translation="MSEILCQWLNKELKVSRTVSPKSFAKAFSSGYLLGEVLHKFELQ
                     DDFSEFLDSRVSSAKLNNFSRLEPTLNLLGVQFDQNVAHGIITEKPGVATKLLYQLYI
                     ALQKKKKSGLTGVEMQTMQRLTNLRLQNMKSDTFQERLRHMIPRQTDFNLMRITYRFQ
                     EKYKHVKEDLAHLHFEKLERFQKLKEEQRCFDIEKQYLNRRRQNEIMAKIQAAIIQIP
                     KPASNRTLKALEAQKMMKKKKEAEDVADEIKKFEALIKKDLQAKESASKTSLDTAGQT
                     TTDLLNTYSDDEYIKKIQKRLEEDAFAREQREKRRRKLLMDQLIAHEAQEEAYREEQL
                     INRLMRQSQQERRIAVQLMHVRHEKEVLWQNRIFREKQHEERRLKDFQDALDREAALA
                     KQAKIDFEEQFLKEKRFHDQIAVERAQARYEKHYSVCAEILDQIVDLSTKVADYRMLT
                     NNLIPYKLMHDWKELFFNAKPIYEQASVKTLPANPSREQLTELEKRDLLDTNDYEEYK
                     NMVGEWALPEEMVDNLPPSNNCILGHILHRLAEKSLPPRAESTTPELPSFAVKGCLLG
                     KTLSGKTTILRSLQKDFPIQILSIDTLVQEAIQAFHDNEKVSEVLPIQKNDEEDALPV
                     LQEEIKESQDPQHVFSAGPVSDEVLPETEGANADKTPKAEEVKSSDSFLKLTTRAQLG
                     AKSEQLLKKGKSIPDVLLVDIIVNAINEIPVNQDCILDGFPMTLNQAQLLEEALTGCN
                     RNLTEVERKKAQKSTLAIDPATSKEIPLPSPAFDFVILLDVSDTSSMSRMNDIIAEEL
                     SYKTAHEDISQRVAAENQDKDGDQNLRDQIQHRIIGFLDNWPLLEQWFSEPENILIKI
                     NAEIDKESLCEKVKEILTTEIAKKKNKVEKKLEEKEAEKKAAASLAELPLPTPPPAPP
                     PEPEKEKEIHQSHVASKTPTAKGKPQSGGDMESSHLGLLIRVRPQTRRGKGTE"
     polyA_site      4485
                     /gene="SPEF2"
                     /gene_synonym="CT122; KPL2; SPGF43"
                     /experiment="COORDINATES: polyA evidence [ECO:0006239]"
ORIGIN      
        1 ctttcgccta gttccagcct ggatacgctt ccatagcaaa gggttgccct tggctacagg
       61 aggacgcggg ctggcaggct tggttcctgg cgagtttcta agcccccgcc tgcggtctga
      121 ggcaccggct gaaccatgtc ggagatcctg tgccagtggc tcaacaagga gttgaaggtg
      181 tcccggaccg tgagtcccaa gtcatttgca aaggcatttt ccagtggcta tctacttgga
      241 gaagttctac acaagtttga acttcaggat gatttttcag aatttttgga cagcagggtt
      301 tcaagtgcca aacttaataa tttttctcgc ttggagccaa cacttaacct tctgggtgtg
      361 cagtttgatc agaatgtggc ccatggcatc atcacagaaa agcctggggt ggcaacaaag
      421 ctgttatatc aattgtacat tgctcttcag aaaaagaaga aaagtggact gactggagtg
      481 gagatgcaaa ccatgcaacg tctgacaaat ttaagacttc aaaacatgaa aagtgatact
      541 tttcaagaga gacttagaca catgatacca cgtcaaactg atttcaatct gatgcggatt
      601 acatacaggt ttcaagaaaa atataaacac gtgaaagaag atcttgccca tttgcatttt
      661 gagaaacttg aaagatttca aaaactcaag gaagagcaaa gatgttttga tattgaaaag
      721 caatacttaa acagaagacg acaaaatgaa ataatggcca aaatccaagc agctattata
      781 cagattccta aacctgcatc aaatcgtact ttgaaagcac tcgaggccca aaaaatgatg
      841 aaaaagaaaa aagaggcaga agatgtggct gatgaaatta agaagttcga agcattaata
      901 aaaaaggatc tccaagcaaa agaaagtgca tccaagactt ctttagatac agcaggccag
      961 acaaccaccg atttgttaaa tacttactca gatgacgagt acattaaaaa aatccagaag
     1021 cgccttgaag aagatgcttt tgcacgagag caaagggaga aaagacggcg gaaattgtta
     1081 atggaccagt taatagccca cgaagcacaa gaggaggctt atcgggagga acagctgatt
     1141 aaccggctga tgcggcagtc ccagcaggag cgcaggattg ccgtgcagct catgcatgtt
     1201 cggcatgaaa aggaagtttt atggcaaaac agaattttca gagaaaaaca acatgaggaa
     1261 agacgactta aagatttcca ggatgctctt gatcgagaag cggctttggc aaaacaagcc
     1321 aagattgact ttgaagaaca attccttaaa gaaaagagat ttcatgatca gattgctgtg
     1381 gaaagagctc aagctcgtta tgaaaagcat tattcagtat gtgcagaaat tttggatcaa
     1441 atagttgatt tgtccactaa agtggcagac tatcgaatgt tgacaaataa tctgattccg
     1501 tataagttga tgcatgattg gaaggaacta ttttttaatg caaaacccat atatgaacaa
     1561 gcctctgtta agacactacc tgctaacccc tcaagagaac aacttacaga actggagaaa
     1621 agggacttgc tagataccaa tgattatgaa gaatataaga acatggttgg agagtgggcc
     1681 ttaccagaag aaatggttga caatttacca ccctccaaca attgcatact gggccatatt
     1741 cttcacaggc tagctgaaaa atctcttcct cctcgagcgg aatcaacaac acctgaatta
     1801 ccttcatttg ctgttaaagg atgcttattg gggaaaacat taagtggaaa aactaccatt
     1861 ttaaggtctc tacaaaaaga ctttcctata cagatacttt ctattgacac tcttgtccaa
     1921 gaagctatcc aagcatttca tgacaatgaa aaagtcagtg aggttctacc aattcagaaa
     1981 aatgatgaag aagatgctct accagttctg caagaggaga ttaaagaaag ccaggatcca
     2041 caacatgtat tttcagctgg tccagtttca gatgaagtat taccagaaac agaaggtgct
     2101 aatgctgata aaacaccaaa agctgaagaa gtcaaatcaa gtgatagttt cttaaaactc
     2161 actacacgtg ctcagcttgg tgcaaaatca gaacagttgc tgaagaaagg aaagagcatt
     2221 cctgatgtgc tgcttgttga catcatagta aatgctatta atgagatacc tgtgaatcaa
     2281 gactgtatcc tagatggttt tccaatgact ttaaaccaag cacagcttct ggaagaagct
     2341 cttacaggct gcaatagaaa cctcacagaa gtggaaagaa aaaaagcaca aaaatccaca
     2401 ttggctattg atcctgcgac ttccaaagaa atacctcttc cctctcctgc atttgatttt
     2461 gtcatattat tagatgtttc agatacttcc tcaatgagtc gcatgaatga tattatagct
     2521 gaagaattgt cctataaaac tgctcacgaa gatatcagtc aacgtgtagc tgctgaaaac
     2581 caagataagg atggagacca aaatttaaga gaccagatac aacatagaat tataggcttc
     2641 ttggacaact ggcctttatt ggagcaatgg ttttcagagc cagaaaatat tttgataaaa
     2701 atcaatgctg aaatagataa ggaatcttta tgtgaaaaag taaaagaaat tcttacgact
     2761 gaaatagcaa aaaaaaagaa taaagttgag aagaaattag aagaaaagga agctgagaaa
     2821 aaagcagcag cttccctggc tgagcttcca cttcctacac ctcctcctgc tcctcctcct
     2881 gaaccagaaa aagagaagga aattcatcaa agccatgtgg cttcaaaaac tcctactgca
     2941 aaaggaaaac ctcaatcagg aggagacatg gagtcatcac acctaggtct actgattaga
     3001 gtaagaccac agacgagaag aggaaaaggc acagagtaac aggtaacttc aggcagatca
     3061 agaggataca cgtctgtgtg ctgaactata gagttacatt tatgtaatga gtaagaacat
     3121 cttaataaaa taagaatgag tatagctggt tttccaccag aataagggaa caaattaaca
     3181 gcaaccatta gaactagaat ttatatgtaa ttgtaaatct tcaggactat gtgattataa
     3241 aagtatagaa acaagctcct gccatctcag taaacatata tttatggaca cagagataaa
     3301 gagcctagat agagaacact tttagtttaa gtttgttcta gatccttaac cgctatggac
     3361 cataagtcta gcattaagtg gcagacaatg aatataatga caaaagtgaa gtgcttaatt
     3421 gttgtaatgc atgatattgg tagagtgtca gtatccattt gtgtgtgtat ataaaacaaa
     3481 tgaggctctg gtttctagtt tcagctttat aaatggctga ctgtgcagtt acaccatgtc
     3541 tacctaagta tctttgatac tgtgtcatga ccacatttct aaactctata gtctttctgc
     3601 ctcacggaga tttgagatag gtcttaattt ttaaaattaa acttattcat attaaacaaa
     3661 gacatatgaa gactttagta agatatatta tgatatatta aagaccattc tgctccagga
     3721 aattagaaat taactacagg caaaatacac acatcctaaa aaatgttttt atcatgtcaa
     3781 caataaaaca caaagacatg aattaaacat acaccctttt cccgctgtct cattaggaaa
     3841 ttaaaaaaca attcagaggt ctggaggaaa atggaaatat ttaaaatgct ttttagaact
     3901 ggggaagaca ggccaagcat ggtggctcat ccctgtaatc ccagcacttt gggaggctga
     3961 ggtgggcaga tcaccagaaa tcaggagttc gagaccccgc tggccaacag ggcaaaaccc
     4021 atctctacca aaaatacaaa aattagctgg gcgtggtggc aggcacctgt aatcccagct
     4081 gcttgggagg ctgaggcagg agaattgctt gaacctgaga ggcggaggtt gcagtgagcc
     4141 gagattgccc cactgcactc tagcctgggg gatagagtga aactctacct ccaaaaaaaa
     4201 gaaaagaaaa ataactgagg aagacagttt tcacagtggg tcaggtgagc ctagaattat
     4261 cgaatatcgt cctttaacct atagctatga ctctaggtta aagctcctcc tcagcttgct
     4321 ccagtcaaga gtatctatgt atttgagcca tttcctgaaa ccagactcta gtgtttctga
     4381 tcagaccagc tcagtcttta agtttctgaa gtttgtttgc tattttataa ttatattctt
     4441 gaatactgtg cattgaagaa ataataaatc tattgttgct ttaaa
//
