LOCUS       NM_001394943            3129 bp    mRNA    linear   PRI 08-APR-2024
DEFINITION  Homo sapiens speedy/RINGO cell cycle regulator family member E16
            (SPDYE16), transcript variant 1, mRNA.
ACCESSION   NM_001394943
VERSION     NM_001394943.1
KEYWORDS    RefSeq; MANE Select.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 3129)
  AUTHORS   Gaudet,P., Livstone,M.S., Lewis,S.E. and Thomas,P.D.
  TITLE     Phylogenetic-based propagation of functional annotations within the
            Gene Ontology consortium
  JOURNAL   Brief Bioinform 12 (5), 449-462 (2011)
   PUBMED   21873635
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            AC004980.5.
            
            Sequence Note: The RefSeq transcript and protein were derived from
            genomic sequence to make the sequence consistent with the reference
            genome assembly. The genomic coordinates used for the transcript
            record were based on alignments.
            
            ##Evidence-Data-START##
            RNAseq introns :: partial sample support SAMEA1965299, SAMEA1966682
                              [ECO:0000350]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            inferred exon combination :: based on alignments, homology
            MANE Ensembl match        :: ENST00000633306.2/ ENSP00000487772.2
            RefSeq Select criteria    :: based on manual assertion, expression,
                                         longest protein
            ##RefSeq-Attributes-END##
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-122               AC004980.5         29217-29338         c
            123-703             AC004980.5         27341-27921         c
            704-922             AC004980.5         26169-26387         c
            923-1153            AC004980.5         24627-24857         c
            1154-1212           AC004980.5         23534-23592         c
            1213-1298           AC004980.5         22213-22298         c
            1299-1542           AC004980.5         19917-20160         c
            1543-1647           AC004980.5         19690-19794         c
            1648-3129           AC004980.5         17354-18835         c
FEATURES             Location/Qualifiers
     source          1..3129
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /chromosome="7"
                     /map="7q11.23"
     gene            1..3129
                     /gene="SPDYE16"
                     /note="speedy/RINGO cell cycle regulator family member
                     E16"
                     /db_xref="GeneID:102723555"
                     /db_xref="HGNC:HGNC:51512"
     exon            1..122
                     /gene="SPDYE16"
                     /inference="alignment:Splign:2.1.0"
     exon            123..703
                     /gene="SPDYE16"
                     /inference="alignment:Splign:2.1.0"
     CDS             544..1602
                     /gene="SPDYE16"
                     /note="isoform 1 is encoded by transcript variant 1;
                     WBSCR19-like protein 5-like; putative speedy protein E16"
                     /codon_start=1
                     /product="speedy protein E16 isoform 1"
                     /protein_id="NP_001381872.1"
                     /db_xref="CCDS:CCDS94129.1"
                     /db_xref="GeneID:102723555"
                     /db_xref="HGNC:HGNC:51512"
                     /translation="MDRTETRFRKRGQIKGKITTSRQPHPQNEQSPQRSTSGYSLQEV
                     VDDEVLGSSAPGVDPSPPCRSLGWKRKKEWSDESEEEPEKELAPEPEETWVVEMLCGL
                     KMKLKQQRVSPILPEHHKDFNSQLAPGVDPSPPHRSFCWKRKREWWDESEESLEEEPR
                     KVLAPEPEEIWVVEMLCGLKMKLKRRRVSLVLPEHHEAFNRLLEDPVIKRFLAWDKDL
                     RVSDKYLLAMVIAYFSRAGLPSWQYQRIHFFLALYLANDMEEDDEDPKQNIFYFLYGK
                     TRSRIPLVRNRRFQLCRCMNPRARKNRSQIALFQKLRFQFFCSMSGRAWVSREELEEI
                     QAYDPEHWVWARDRARLS"
     exon            704..922
                     /gene="SPDYE16"
                     /inference="alignment:Splign:2.1.0"
     exon            923..1153
                     /gene="SPDYE16"
                     /inference="alignment:Splign:2.1.0"
     exon            1154..1212
                     /gene="SPDYE16"
                     /inference="alignment:Splign:2.1.0"
     exon            1213..1298
                     /gene="SPDYE16"
                     /inference="alignment:Splign:2.1.0"
     exon            1299..1542
                     /gene="SPDYE16"
                     /inference="alignment:Splign:2.1.0"
     exon            1543..1647
                     /gene="SPDYE16"
                     /inference="alignment:Splign:2.1.0"
     exon            1648..3129
                     /gene="SPDYE16"
                     /inference="alignment:Splign:2.1.0"
ORIGIN      
        1 aacaatggga cttccacagc aatgggatct gcttcctctt tcagtgtgtg ccttttctat
       61 gagcgagaga ctcctaggaa agcagcagcc cattaggaaa acgtgtggga actcactcgc
      121 agcctggact ctgaaatggg catgtacaga gatgaagaga ccccaacatg cttcaggctt
      181 tgagtggaga ggacacagcc tctgctggga cagggaacag agggatgtgg agtccccgaa
      241 gatgcttttg gacaatggtc tgaggttggg acagtggcag gagataccat tcacccagga
      301 tctccaggac aagagatcag cctggcagtt acatgtgttt tttttcaaac tggttgccag
      361 gttggcatga acgatgacat cagagattcc gaccttcctg attggaggga ccggactccg
      421 tggtgcctgg agatcagttg gacaacagta tcttctcaga gctgttctcc actcctgact
      481 tctcctaggc ttgagaattg ataacatact cttctggatc ctagcagtgt ccagaagaag
      541 gccatggaca gaacggagac taggttccgt aagaggggac agattaaggg aaagatcacg
      601 accagccgtc aacctcaccc ccagaatgag cagagtcccc agcggagcac ctcggggtac
      661 tccctccagg aggtggtgga tgatgaagtg ttgggatcat cagcccctgg ggtagatccc
      721 agccccccat gtaggtccct tggctggaaa aggaagaagg agtggtcaga tgaatctgag
      781 gaggagccgg agaaggagct cgcccctgag cctgaggaga cctgggtagt ggagatgctg
      841 tgtgggctca agatgaagct gaagcaacag cgagtgtcac ccatcctccc tgagcaccac
      901 aaggacttca acagtcagct tgcccctggg gtagatccca gccccccgca taggtccttt
      961 tgctggaaaa ggaagaggga gtggtgggac gaatctgagg agtcgttgga ggaggagcca
     1021 cggaaggtgc tcgcccctga gcctgaggag atctgggtgg tggagatgct gtgtggcctc
     1081 aagatgaagc tgaagcgacg gcgagtgtcg ctcgtgctcc ctgagcacca cgaggccttc
     1141 aacaggctgc ttgaggatcc tgtcattaaa agattcctgg cctgggacaa agatctgagg
     1201 gtgtcggaca agtatctcct ggctatggtc atagcgtatt tcagccgggc cggcctcccc
     1261 tcctggcaat accaacgcat tcatttcttc ctggctctct acctggccaa tgacatggag
     1321 gaggacgacg aggaccccaa acaaaacatc ttctacttcc tgtatgggaa gacccgctct
     1381 cgcataccct tggtccgtaa ccgtcggttc cagttatgcc gttgcatgaa cccgagggcc
     1441 aggaagaacc gctctcagat agccctgttc cagaaacttc ggttccagtt cttctgttcc
     1501 atgagcggca gggcttgggt ttcccgggag gagttggagg agatccaggc ttatgaccca
     1561 gagcactggg tgtgggcgcg agatcgcgct cgcctttcct agagctccag ggaccgtgga
     1621 ggcctgaggt catcggcctg agagaagaac accggaccca cgggagatgt ggattttcag
     1681 caggaacttt attccaatgc taatggcagt caacaggaaa gaggagagga accatttgtg
     1741 cagatcatct agaagaacct ggaccattct tgatggagct gaatacagtg atcacgttgt
     1801 cctcctggga gcaggggtgg ggggaggggg gtggggtcct tctaggagtc cttggagaaa
     1861 agtaagaaac caggagtgtt tccagttcca ccctttcctg cggcaccacc acccttttta
     1921 tattgctgaa tgccaacctc cctggggcgg aacctgaggt cctgtttctt acggacttgg
     1981 ttgccacagt ccaggagcat ttgaaggcac aatgcagggg ctcagattgg cacagaattc
     2041 ttttgtgaaa tatcagtgcc acagattgta acagatagct tcatgcacac tctgcatttt
     2101 attggtttgt ttggaaaatg ttggccattg aattattcat agatttattt caaatagttt
     2161 ggaaattgtt gtacttttga aaacatgctg ttcctgtagt tttttgatga gagttatagt
     2221 tgttatatat acataaagat aattttcttt tcatttttaa gagacaattc tttttatcct
     2281 aaatatttta ttatctttaa atttgtttct gtattattat atgtgctcct gaagtgagca
     2341 ctctttttat ctatgatatt tccataataa tctcttctat ttatagctat tggtagttcc
     2401 ccaccagaaa aaaacataat tctggtgata gaaattttta tttgctgttt aggtctgtga
     2461 ctgaattgtg agaattcagt tgtgattttt aacatgtctc agatatatat actaacacgt
     2521 ctaatatata ctatctaatt tattggttta ttttgaaaaa catgggtata gaattattta
     2581 aatattattt tatttattga aatattaaat atatttattt atttgaatat tattacttga
     2641 aatattattt taaatatttt ggaaatactg gtatttttga atagatgctg tttctataaa
     2701 gctgtgtgat gggtgttata actgttatat acacatacgt ataattttgc tttccttttt
     2761 aagagaggat tcttttcatc ctaaatcttt tacctttcaa tctttgtatc tattattaca
     2821 cgtgctgctg aagggagcat ggtttttatc tatgatactt agttaacata tatattacat
     2881 ttatagctat gtagtagttc ccctaaattc ttgtaaaaat aaatttttat ttgatatttc
     2941 atatatgttt gaaatgtgag aattcagatg taatttttta ccttgttttg gcatctttgt
     3001 atgttacttt aaagaggatg tgtgttctaa aggaggacat gagctgtgtg ttttcaagag
     3061 aacaatagag tgcgtctctt ggggaaacat aataaaaatg aacttttctc accttcacag
     3121 caactgtga
//
