LOCUS       NM_001024601             506 bp    mRNA    linear   PRI 08-JUN-2024
DEFINITION  Homo sapiens spermatogenesis associated 45 (SPATA45), mRNA.
ACCESSION   NM_001024601 XM_086616
VERSION     NM_001024601.3
KEYWORDS    RefSeq; MANE Select.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 506)
  AUTHORS   Rose,J.E., Behm,F.M., Drgon,T., Johnson,C. and Uhl,G.R.
  TITLE     Personalized smoking cessation: interactions between nicotine dose,
            dependence and quit-success genotype score
  JOURNAL   Mol Med 16 (7-8), 247-253 (2010)
   PUBMED   20379614
  REMARK    GeneRIF: Clinical trial of gene-disease association and
            gene-environment interaction. (HuGE Navigator)
            Erratum:[Mol Med. 2012;18(1):729]
COMMENT     VALIDATED REFSEQ: This record has undergone validation or
            preliminary review. The reference sequence was derived from
            BC035742.1.
            
            On May 17, 2019 this sequence version replaced NM_001024601.2.
            
            ##Evidence-Data-START##
            Transcript exon combination :: BC035742.1, BX115933.1 [ECO:0000332]
            RNAseq introns              :: single sample supports all introns
                                           SAMEA1968968, SAMEA2148093
                                           [ECO:0000348]
            ##Evidence-Data-END##
            
            ##RefSeq-Attributes-START##
            MANE Ensembl match     :: ENST00000332912.3/ ENSP00000419160.1
            RefSeq Select criteria :: based on single protein-coding transcript
            ##RefSeq-Attributes-END##
            COMPLETENESS: complete on the 3' end.
PRIMARY     REFSEQ_SPAN         PRIMARY_IDENTIFIER PRIMARY_SPAN        COMP
            1-506               BC035742.1         1-506
FEATURES             Location/Qualifiers
     source          1..506
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /chromosome="1"
                     /map="1q32.3"
     gene            1..506
                     /gene="SPATA45"
                     /gene_synonym="C1orf227"
                     /note="spermatogenesis associated 45"
                     /db_xref="GeneID:149643"
                     /db_xref="HGNC:HGNC:33709"
     exon            1..70
                     /gene="SPATA45"
                     /gene_synonym="C1orf227"
                     /inference="alignment:Splign:2.1.0"
     exon            71..385
                     /gene="SPATA45"
                     /gene_synonym="C1orf227"
                     /inference="alignment:Splign:2.1.0"
     CDS             109..405
                     /gene="SPATA45"
                     /gene_synonym="C1orf227"
                     /note="UPF0732 protein C1orf227"
                     /codon_start=1
                     /product="spermatogenesis-associated protein 45"
                     /protein_id="NP_001019772.1"
                     /db_xref="CCDS:CCDS31020.1"
                     /db_xref="GeneID:149643"
                     /db_xref="HGNC:HGNC:33709"
                     /translation="MASINRTIEIMKKHGVSKQHLLEEINKKRESNCLVERSNQVSLL
                     RVQKRHFPDAYQSFTDTTTKEPVPNSGRSSWIKLSLLAHMERKHFPPKNNAIFG"
     exon            386..506
                     /gene="SPATA45"
                     /gene_synonym="C1orf227"
                     /inference="alignment:Splign:2.1.0"
     regulatory      430..435
                     /regulatory_class="polyA_signal_sequence"
                     /gene="SPATA45"
                     /gene_synonym="C1orf227"
                     /note="hexamer: AATACA"
     polyA_site      455
                     /gene="SPATA45"
                     /gene_synonym="C1orf227"
                     /note="major polyA site"
ORIGIN      
        1 tcccagtggg ctaatccaca ccagtggact tgaaacacgc tttgggttgc tgtatggtag
       61 tatgctaaag gacagcaaga atcacttgac aattggtttg tgaccataat ggcatctata
      121 aacagaacca ttgaaataat gaaaaaacat ggagtaagca aacaacatct cctggaggag
      181 ataaacaaaa agcgtgaatc caactgcttg gtggaacgaa gcaatcaagt cagcttactg
      241 agagttcaaa agaggcactt cccggatgcc tatcagtcct ttactgatac cacaaccaaa
      301 gagcctgttc ccaacagtgg caggagctcc tggatcaagc tgagtctcct tgctcacatg
      361 gagagaaagc actttccacc aaaaaataat gccatatttg gataaagtgc atctccagag
      421 acacacggaa atacattctc tttgattctt cttcagtgtg tctaaattat ttacaaatta
      481 ttaattataa acaaagctaa acaaaa
//
